BLASTX nr result
ID: Catharanthus23_contig00032691
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032691
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACB29142.1| NADH dehydrogenase subunit D [Chuquiraga spinosa] 76 2e-21
gb|AFU96436.1| NdhD, partial (chloroplast) [Viola pubescens] 74 8e-21
ref|YP_007889910.1| NADH-plastoquinone oxidoreductase subunit 4 ... 74 1e-20
gb|AFU96434.1| NdhD, partial (chloroplast) [Trigonia sp. CCD-2012] 72 2e-20
gb|ADD29830.1| NADH-plastoquinone oxidoreductase subunit 4 prote... 72 2e-20
gb|AFU96398.1| NdhD, partial (chloroplast) [Averrhoa carambola] 74 3e-20
ref|YP_004021714.1| NADH-plastoquinone oxidoreductase subunit 4 ... 74 1e-19
ref|YP_008994538.1| NADH-plastoquinone oxidoreductase subunit 4 ... 72 1e-19
gb|AFU96404.1| NdhD, partial (chloroplast) [Chrysobalanus icaco] 71 2e-19
gb|ADD29827.1| NADH-plastoquinone oxidoreductase subunit 4 prote... 72 3e-19
ref|YP_008965542.1| NADH-plastoquinone oxidoreductase subunit 4 ... 74 5e-19
ref|YP_004842287.1| NADH-plastoquinone oxidoreductase subunit 4 ... 74 5e-19
gb|AFU96410.1| NdhD, partial (chloroplast) [Flueggea suffruticosa] 72 9e-19
gb|AFU96406.1| NdhD, partial (chloroplast) [Dichapetalum zenkeri] 73 1e-18
ref|YP_007026187.1| NADH-plastoquinone oxidoreductase subunit 4 ... 67 9e-18
gb|AFU96411.1| NdhD, partial (chloroplast) [Galearia maingayi] 69 1e-17
gb|AFB76989.1| NADH dehydrogenase subunit 4, partial (chloroplas... 69 3e-17
ref|YP_002456488.1| NADH-plastoquinone oxidoreductase subunit 4 ... 72 5e-17
ref|NP_084845.1| NADH dehydrogenase subunit 4 [Lotus japonicus] ... 72 1e-16
ref|YP_003587793.1| NADH dehydrogenase subunit 4 [Lathyrus sativ... 74 1e-16
>gb|ACB29142.1| NADH dehydrogenase subunit D [Chuquiraga spinosa]
Length = 500
Score = 76.3 bits (186), Expect(2) = 2e-21
Identities = 36/39 (92%), Positives = 36/39 (92%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAGGSIF
Sbjct: 139 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSIF 177
Score = 51.6 bits (122), Expect(2) = 2e-21
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ WP+TRDSRLFHFLML MYS
Sbjct: 98 TLATLAAWPITRDSRLFHFLMLAMYS 123
>gb|AFU96436.1| NdhD, partial (chloroplast) [Viola pubescens]
Length = 505
Score = 73.6 bits (179), Expect(2) = 8e-21
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAG S+F
Sbjct: 142 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGSSVF 180
Score = 52.4 bits (124), Expect(2) = 8e-21
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TLATL+ WPVTRDSRLFHFLML MYS QI F + F
Sbjct: 101 TLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSQDLLLF 140
>ref|YP_007889910.1| NADH-plastoquinone oxidoreductase subunit 4 [Francoa sonchifolia]
gi|386268414|gb|AFJ00520.1| NADH-plastoquinone
oxidoreductase subunit 4 [Francoa sonchifolia]
Length = 500
Score = 73.9 bits (180), Expect(2) = 1e-20
Identities = 35/39 (89%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAG SIF
Sbjct: 139 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGSSIF 177
Score = 51.6 bits (122), Expect(2) = 1e-20
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ WP+TRDSRLFHFLML MYS
Sbjct: 98 TLATLAAWPITRDSRLFHFLMLAMYS 123
>gb|AFU96434.1| NdhD, partial (chloroplast) [Trigonia sp. CCD-2012]
Length = 504
Score = 72.4 bits (176), Expect(2) = 2e-20
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLL+SMWGGKK LYS TKFILYTAG S+F
Sbjct: 142 IMWELELIPVYLLVSMWGGKKRLYSATKFILYTAGSSVF 180
Score = 52.4 bits (124), Expect(2) = 2e-20
Identities = 27/40 (67%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TLATL+ WPVTRDSRLFHFLML MYS QI F + F
Sbjct: 101 TLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSQDLLLF 140
>gb|ADD29830.1| NADH-plastoquinone oxidoreductase subunit 4 protein [Staphylea
colchica]
Length = 500
Score = 72.4 bits (176), Expect(2) = 2e-20
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLL+MWGGKK LYS TKFILYTAG S+F
Sbjct: 139 IMWELELIPVYLLLAMWGGKKRLYSATKFILYTAGSSVF 177
Score = 52.4 bits (124), Expect(2) = 2e-20
Identities = 26/32 (81%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHF 95
TLATL+ WPVTRDSRLFHFLML MYS QI F
Sbjct: 98 TLATLAAWPVTRDSRLFHFLMLAMYSGQIGSF 129
>gb|AFU96398.1| NdhD, partial (chloroplast) [Averrhoa carambola]
Length = 503
Score = 73.9 bits (180), Expect(2) = 3e-20
Identities = 35/39 (89%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAG SIF
Sbjct: 142 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGSSIF 180
Score = 50.1 bits (118), Expect(2) = 3e-20
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ WPVTR+SRLFHFLML MYS
Sbjct: 101 TLATLAAWPVTRNSRLFHFLMLVMYS 126
>ref|YP_004021714.1| NADH-plastoquinone oxidoreductase subunit 4 [Prunus persica]
gi|309321483|gb|ADO65024.1| NADH-plastoquinone
oxidoreductase subunit 4 [Prunus persica]
Length = 500
Score = 73.6 bits (179), Expect(2) = 1e-19
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAG S+F
Sbjct: 139 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGSSVF 177
Score = 48.5 bits (114), Expect(2) = 1e-19
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+T PVTRDSRLFHFLML MYS
Sbjct: 98 TLATLATRPVTRDSRLFHFLMLAMYS 123
>ref|YP_008994538.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Hypseocharis bilobata] gi|540067616|gb|AGV02967.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Hypseocharis bilobata]
Length = 514
Score = 72.4 bits (176), Expect(2) = 1e-19
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGG+K LYS TKFILYTAG S+F
Sbjct: 148 IMWELELIPVYLLLSMWGGRKRLYSATKFILYTAGSSVF 186
Score = 49.3 bits (116), Expect(2) = 1e-19
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TLATL+ WPV+RDSRLF+FLML MYS QI F + F
Sbjct: 107 TLATLAAWPVSRDSRLFYFLMLAMYSGQIGSFSSQDLLLF 146
>gb|AFU96404.1| NdhD, partial (chloroplast) [Chrysobalanus icaco]
Length = 504
Score = 71.2 bits (173), Expect(2) = 2e-19
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLL++MWGGKK LYS TKFILYTAG S+F
Sbjct: 141 IMWELELIPVYLLVAMWGGKKRLYSATKFILYTAGSSVF 179
Score = 50.1 bits (118), Expect(2) = 2e-19
Identities = 26/40 (65%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TLA L+ WPVTRDSRLFHFLML MYS QI F + F
Sbjct: 100 TLAILAAWPVTRDSRLFHFLMLAMYSGQIGLFSSQDLLLF 139
>gb|ADD29827.1| NADH-plastoquinone oxidoreductase subunit 4 protein [Oxalis
latifolia]
Length = 498
Score = 72.4 bits (176), Expect(2) = 3e-19
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWE EL PVYLLLSMWGGKK LYS TKFILYTAG SIF
Sbjct: 139 IMWEFELIPVYLLLSMWGGKKRLYSATKFILYTAGSSIF 177
Score = 48.1 bits (113), Expect(2) = 3e-19
Identities = 24/32 (75%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHF 95
TLATL+ WPVTR+ RLFHFLML MYS QI F
Sbjct: 98 TLATLAAWPVTRNYRLFHFLMLVMYSGQIGSF 129
>ref|YP_008965542.1| NADH-plastoquinone oxidoreductase subunit 4 [Pyrus spinosa]
gi|565666514|emb|CDI73614.1| NADH-plastoquinone
oxidoreductase subunit 4 [Pyrus spinosa]
Length = 500
Score = 73.6 bits (179), Expect(2) = 5e-19
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAG S+F
Sbjct: 139 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGSSVF 177
Score = 46.2 bits (108), Expect(2) = 5e-19
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ P+TRDSRLFHFLML MYS
Sbjct: 98 TLATLAARPITRDSRLFHFLMLAMYS 123
>ref|YP_004842287.1| NADH-plastoquinone oxidoreductase subunit 4 [Pyrus pyrifolia]
gi|345433610|dbj|BAK69432.1| NADH-plastoquinone
oxidoreductase subunit 4 [Pyrus pyrifolia]
Length = 500
Score = 73.6 bits (179), Expect(2) = 5e-19
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAG S+F
Sbjct: 139 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGSSVF 177
Score = 46.2 bits (108), Expect(2) = 5e-19
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ P+TRDSRLFHFLML MYS
Sbjct: 98 TLATLAARPITRDSRLFHFLMLAMYS 123
>gb|AFU96410.1| NdhD, partial (chloroplast) [Flueggea suffruticosa]
Length = 505
Score = 71.6 bits (174), Expect(2) = 9e-19
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGK LYS TKFILYTAG S+F
Sbjct: 142 IMWELELIPVYLLLSMWGGKNRLYSATKFILYTAGSSVF 180
Score = 47.4 bits (111), Expect(2) = 9e-19
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TLA+L+ PVTRDSRLFHFLMLTMYS QI F + F
Sbjct: 101 TLASLAARPVTRDSRLFHFLMLTMYSGQIGLFSSQDLLLF 140
>gb|AFU96406.1| NdhD, partial (chloroplast) [Dichapetalum zenkeri]
Length = 505
Score = 72.8 bits (177), Expect(2) = 1e-18
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLL+SMWGGKK LYS TKFILYTAG SIF
Sbjct: 142 IMWELELIPVYLLVSMWGGKKRLYSATKFILYTAGSSIF 180
Score = 45.8 bits (107), Expect(2) = 1e-18
Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TLATL+ PVTRDSRLFHFL+L MYS QI F + F
Sbjct: 101 TLATLAARPVTRDSRLFHFLILAMYSGQIGLFASQDLLLF 140
>ref|YP_007026187.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Pellia
endiviifolia] gi|408773150|gb|AFU88897.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Pellia endiviifolia]
Length = 525
Score = 67.4 bits (163), Expect(2) = 9e-18
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +2
Query: 125 MWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
MWELEL PVYLLL MWGGK+ LY+ TKF+LYTAG SIF
Sbjct: 140 MWELELIPVYLLLIMWGGKRRLYAATKFVLYTAGSSIF 177
Score = 48.1 bits (113), Expect(2) = 9e-18
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TL+TL+ WPVTR+ RLFHFLML MYS Q+ F+ + F
Sbjct: 98 TLSTLAAWPVTRNPRLFHFLMLAMYSGQVGLFVSQDILLF 137
>gb|AFU96411.1| NdhD, partial (chloroplast) [Galearia maingayi]
Length = 503
Score = 69.3 bits (168), Expect(2) = 1e-17
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLS WGGK LYS TKFILYTAG S+F
Sbjct: 142 IMWELELIPVYLLLSAWGGKNRLYSATKFILYTAGSSVF 180
Score = 45.8 bits (107), Expect(2) = 1e-17
Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS-QIDHFLLETFYFF 119
TLATL+ PVTRD+RLFHFLML MYS QI F + F
Sbjct: 101 TLATLAARPVTRDARLFHFLMLAMYSGQIGLFSSQDLLLF 140
>gb|AFB76989.1| NADH dehydrogenase subunit 4, partial (chloroplast) [Blossfeldia
liliputana]
Length = 297
Score = 68.6 bits (166), Expect(2) = 3e-17
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVY LLSMWG KK L+S TKFILYTAGGSIF
Sbjct: 136 IMWELELIPVYPLLSMWGRKKCLHSATKFILYTAGGSIF 174
Score = 45.4 bits (106), Expect(2) = 3e-17
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ WPVTRDS LF+F ML MYS
Sbjct: 97 TLATLAAWPVTRDSPLFYFFMLAMYS 122
>ref|YP_002456488.1| NADH-plastoquinone oxidoreductase subunit 4 [Trifolium
subterraneum] gi|193788973|gb|ACF20569.1|
NADH-plastoquinone oxidoreductase subunit 4 [Trifolium
subterraneum]
Length = 498
Score = 72.4 bits (176), Expect(2) = 5e-17
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLS+WGGKK LYS TKFILYTAG SIF
Sbjct: 140 IMWELELIPVYLLLSIWGGKKRLYSATKFILYTAGASIF 178
Score = 40.8 bits (94), Expect(2) = 5e-17
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ PVTR+ RLF+FLML MYS
Sbjct: 99 TLATLAAQPVTREYRLFYFLMLAMYS 124
>ref|NP_084845.1| NADH dehydrogenase subunit 4 [Lotus japonicus]
gi|17433137|sp|Q9BBP3.1|NU4C_LOTJA RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|13359028|dbj|BAB33245.1| NADH dehydrogenase
ND4 [Lotus japonicus]
Length = 497
Score = 72.4 bits (176), Expect(2) = 1e-16
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLL+MWGGKK LYS TKFILYTAG S+F
Sbjct: 139 IMWELELIPVYLLLAMWGGKKRLYSATKFILYTAGSSVF 177
Score = 39.7 bits (91), Expect(2) = 1e-16
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ P+TR+ +LF+FLML MYS
Sbjct: 98 TLATLAAQPITRECKLFYFLMLAMYS 123
>ref|YP_003587793.1| NADH dehydrogenase subunit 4 [Lathyrus sativus]
gi|293338695|gb|ADE43667.1| NADH dehydrogenase subunit 4
(chloroplast) [Lathyrus sativus]
Length = 497
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 122 IMWELELSPVYLLLSMWGGKKSLYSDTKFILYTAGGSIF 238
IMWELEL PVYLLLSMWGGKK LYS TKFILYTAG S+F
Sbjct: 139 IMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGASVF 177
Score = 38.1 bits (87), Expect(2) = 1e-16
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 3 TLATLSTWPVTRDSRLFHFLMLTMYS 80
TLATL+ PVTR +LF+FLML MYS
Sbjct: 98 TLATLAAQPVTRKYQLFYFLMLAMYS 123