BLASTX nr result

ID: Catharanthus23_contig00032638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00032638
         (518 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616704.1| hypothetical protein MTR_5g083380 [Medicago ...    44   2e-06

>ref|XP_003616704.1| hypothetical protein MTR_5g083380 [Medicago truncatula]
           gi|355518039|gb|AES99662.1| hypothetical protein
           MTR_5g083380 [Medicago truncatula]
          Length = 323

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -3

Query: 270 FQPYNFSGKRLSNRRKQYFCVF*NNNGHTIDRCYKKHDFPPN---QKFKGKLGGSFGDHG 100
           FQP        S+ +    C + N +GHTI+ CYKKH FPP+   Q     +  S G   
Sbjct: 233 FQPRGKGSYYGSSGKPSRLCTYCNRSGHTIETCYKKHGFPPHFGRQNVSANVSSSDGIET 292

Query: 99  RGHTQTN*KYCLRREYS 49
              + TN     R +++
Sbjct: 293 HLQSSTNEDTSTRNQFN 309



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = -1

Query: 482 GLNDSFKSVRSKVLMTVPLLDMNTVFNMAIK 390
           GLND+F  V+S+VL+  PL  +N V++M ++
Sbjct: 170 GLNDNFSVVKSQVLLMEPLPSINKVYSMFVQ 200


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