BLASTX nr result

ID: Catharanthus23_contig00032603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00032603
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624...    44   1e-07

>ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624694 isoform X1 [Citrus
           sinensis] gi|568852764|ref|XP_006480041.1| PREDICTED:
           uncharacterized protein LOC102624694 isoform X2 [Citrus
           sinensis] gi|568852766|ref|XP_006480042.1| PREDICTED:
           uncharacterized protein LOC102624694 isoform X3 [Citrus
           sinensis]
          Length = 320

 Score = 43.9 bits (102), Expect(2) = 1e-07
 Identities = 18/38 (47%), Positives = 28/38 (73%)
 Frame = +3

Query: 6   LKQ*FGVTNSARINELKATLINCKQKGMTVANYHTKLK 119
           +K+ F V N  R+++LK+ L  CKQ+GMT+ +Y+ KLK
Sbjct: 49  IKERFSVGNGPRVHQLKSELAECKQRGMTILSYYGKLK 86



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
 Frame = +2

Query: 101 LSY--QIKKIFDELINYEHL----LESTNNELTMELGKPYEQEKLILILVGMNGTIFGTV 262
           LSY  ++K I++EL NYE            EL  +L K  E+E+L   L+G++ TI+G+V
Sbjct: 79  LSYYGKLKLIWEELANYEQYPICSCGGCTCELEAKLNKKCEEERLHQFLMGLDDTIYGSV 138

Query: 263 HS 268
            S
Sbjct: 139 RS 140


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