BLASTX nr result
ID: Catharanthus23_contig00032245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032245
(1113 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi... 295 7e-96
ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containi... 295 3e-94
gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus pe... 272 7e-90
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera] 271 6e-89
ref|XP_002306667.1| pentatricopeptide repeat-containing family p... 280 2e-88
gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein... 268 1e-85
ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containi... 281 2e-85
ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containi... 252 5e-80
ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containi... 243 7e-79
ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containi... 242 3e-78
ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containi... 258 8e-77
ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containi... 257 2e-76
ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata] ... 238 1e-70
ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutr... 228 7e-70
sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-c... 227 6e-68
ref|NP_175064.2| pentatricopeptide repeat-containing protein [Ar... 226 1e-67
ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Caps... 223 1e-67
ref|XP_002520264.1| pentatricopeptide repeat-containing protein,... 187 6e-63
ref|XP_004237750.1| PREDICTED: pentatricopeptide repeat-containi... 187 2e-61
ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containi... 175 7e-61
>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 295 bits (754), Expect(2) = 7e-96
Identities = 149/267 (55%), Positives = 193/267 (72%)
Frame = -1
Query: 1023 MHPLLTRVHIHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 844
M P L + H L S ++YSNLI+ K ++AK +HAQLIK+GFNT+TFLGNRC
Sbjct: 22 MQPFLKKAH--GPLATSLSYYSNLIEHCFLL-KSLDYAKFVHAQLIKVGFNTHTFLGNRC 78
Query: 843 IDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWN 664
+D+YS++ +D+L VF++I ++N+ SWNI LK V+ G++E AR +FDEMP+RDVVSWN
Sbjct: 79 LDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWN 138
Query: 663 SMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGAD 484
+MISGY+S G + A+ F EM+K G+RPS FT+S L+S V A GKQ+H +IRNG D
Sbjct: 139 TMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACRGKQIHASMIRNGVD 198
Query: 483 YSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCL 304
SN++VGNSLI MYGK GV+DYA GVF +M E+D+ SWNSLI K G +N AL F L
Sbjct: 199 LSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVL 258
Query: 303 MRYEGYVPDEFTVSAVIAACSNLCNLE 223
MR GY PD+FTVS VI CSNL +LE
Sbjct: 259 MRSVGYSPDQFTVSTVITVCSNLQDLE 285
Score = 84.3 bits (207), Expect(2) = 7e-96
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F+ DS LCN+MISSYA HG E A FVL LREN+RPTEFTLS +L
Sbjct: 317 NRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVL 376
Query: 43 NCASAFIIVAQGSQ 2
+ S + V QGSQ
Sbjct: 377 SAVSILLPVDQGSQ 390
Score = 107 bits (268), Expect = 7e-21
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 3/226 (1%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
+ I A I++GF +N+ + + ID++SK N D++ VF+EI + W
Sbjct: 288 EQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEI-----YQW---------- 332
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
D V N+MIS Y G E A +F+ + +RP+ FT S ++
Sbjct: 333 ----------------DSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVL 376
Query: 549 SSVKCAFI---GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDL 379
S+V G Q+H V+++G + S++IV +SL++MY K G++D A+ F + DL
Sbjct: 377 SAVSILLPVDQGSQIHSLVVKSGLE-SDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDL 435
Query: 378 ISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACS 241
ISWN++I G G + AL+ F + G PDE T++ V+ AC+
Sbjct: 436 ISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACN 481
Score = 62.0 bits (149), Expect = 4e-07
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDAL 802
P FT +++ +S P + IH+ ++K G ++ + + ++MY+K L A+
Sbjct: 367 PTEFTL--SIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAM 424
Query: 801 NVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEM----PERDVVSWNSMISGYISCG 634
F +IG R++ SWN + L G + A ++F E+ P D ++ ++ G
Sbjct: 425 KTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGG 484
Query: 633 TSEKAWVVFLEMRK-YGVRPSVFTFSNLI 550
++ +F M K YGV P++ ++ ++
Sbjct: 485 LVDEGLSIFSSMEKEYGVIPAIEHYACIV 513
>ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Solanum tuberosum]
Length = 644
Score = 295 bits (756), Expect(2) = 3e-94
Identities = 158/271 (58%), Positives = 191/271 (70%), Gaps = 3/271 (1%)
Frame = -1
Query: 1026 CMHPLLTRV---HIHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFL 856
CM+P + RV H H S +FYS LI LSF + +H +LIKLGFN NTFL
Sbjct: 16 CMYPFVQRVYKYHTH-----SLSFYSRLIPHCLSFSS----LQILHGKLIKLGFNKNTFL 66
Query: 855 GNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDV 676
GN +D+YSK DA VFDEI +N SWNI LK LV+ GD+ ARQLFDEMPERDV
Sbjct: 67 GNCYLDLYSKFGTKIDAFKVFDEIPYKNAVSWNIWLKVLVQSGDVHCARQLFDEMPERDV 126
Query: 675 VSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIR 496
VSWNSMISGY G E A VFLEM+KYG+RPS +T+S L+S V+ AF GK++H ++R
Sbjct: 127 VSWNSMISGYALYGLFENALGVFLEMQKYGIRPSGYTYSILVSHVEFAFHGKEIHGNMLR 186
Query: 495 NGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALD 316
NG D SN++VGNSLIDMYGK G++DYA GVF +M VD+ISWNSLIS CK G E+ AL
Sbjct: 187 NGVDLSNVVVGNSLIDMYGKLGIVDYATGVFLAMETVDVISWNSLISSCCKSGYEDTALS 246
Query: 315 HFCLMRYEGYVPDEFTVSAVIAACSNLCNLE 223
+F LMR Y PDEFT+S+V+ CSNL +LE
Sbjct: 247 YFSLMRACKYSPDEFTMSSVLIGCSNLRSLE 277
Score = 78.2 bits (191), Expect(2) = 3e-94
Identities = 39/66 (59%), Positives = 47/66 (71%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N +E S IF S + D+ALCNSMISSYA + EE A FVL LR+NIRPTEFTLS +L
Sbjct: 309 NRIEYSARIFKDSNIWDTALCNSMISSYALNSLEENALQLFVLTLRKNIRPTEFTLSCIL 368
Query: 43 NCASAF 26
+C + F
Sbjct: 369 SCTTTF 374
Score = 89.0 bits (219), Expect = 3e-15
Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 2/249 (0%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDAL 802
P FT S LI S + K I +K+GF N + + ID++S N +
Sbjct: 258 PDEFTMSSVLIG--CSNLRSLEKGKQILCLCVKMGFLCNAIVSSAAIDLFSNCNRIEYSA 315
Query: 801 NVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEK 622
+F + NI+ +C NSMIS Y E
Sbjct: 316 RIFKD---SNIWDTALC----------------------------NSMISSYALNSLEEN 344
Query: 621 AWVVFLEMRKYGVRPSVFTFSNLISSVKC--AFIGKQLHCCVIRNGADYSNLIVGNSLID 448
A +F+ + +RP+ FT S ++S +G Q H VI+ G S+ +V SL+D
Sbjct: 345 ALQLFVLTLRKNIRPTEFTLSCILSCTTTFPVDLGIQAHSLVIKLGF-VSDPVVSTSLVD 403
Query: 447 MYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFT 268
MY K G++D A +F ++ DLISWN++I G G +L + + G PD T
Sbjct: 404 MYCKYGLIDSATNIFNDLLTRDLISWNTMIFGLAINGESTKSLSLYYELLELGGQPDRIT 463
Query: 267 VSAVIAACS 241
++A++ ACS
Sbjct: 464 LTALLLACS 472
Score = 81.6 bits (200), Expect = 5e-13
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 4/248 (1%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFN-TNTFLGNRCIDMYSKVNLFHDA 805
P +T YS L+ + + A K IH +++ G + +N +GN IDMY K+ + A
Sbjct: 159 PSGYT-YSILVSHV----EFAFHGKEIHGNMLRNGVDLSNVVVGNSLIDMYGKLGIVDYA 213
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
VF + ++T+ DV+SWNS+IS G +
Sbjct: 214 TGVF------------LAMETV-------------------DVISWNSLISSCCKSGYED 242
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLI---SSVKCAFIGKQLHCCVIRNGADYSNLIVGNSL 454
A F MR P FT S+++ S+++ GKQ+ C ++ G N IV ++
Sbjct: 243 TALSYFSLMRACKYSPDEFTMSSVLIGCSNLRSLEKGKQILCLCVKMGF-LCNAIVSSAA 301
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDE 274
ID++ ++Y+ +F D NS+IS + LE AL F L + P E
Sbjct: 302 IDLFSNCNRIEYSARIFKDSNIWDTALCNSMISSYALNSLEENALQLFVLTLRKNIRPTE 361
Query: 273 FTVSAVIA 250
FT+S +++
Sbjct: 362 FTLSCILS 369
>gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus persica]
Length = 629
Score = 272 bits (695), Expect(2) = 7e-90
Identities = 138/236 (58%), Positives = 175/236 (74%), Gaps = 1/236 (0%)
Frame = -1
Query: 927 KPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKV-NLFHDALNVFDEIGERNIFSWNIC 751
K NFAK IHAQLIK+GFN++TFLGNRC+D+Y + N +DAL VFDEI ++NI SWNIC
Sbjct: 26 KSLNFAKVIHAQLIKVGFNSHTFLGNRCLDVYFRFGNTVYDALKVFDEITDKNIVSWNIC 85
Query: 750 LKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSV 571
LK + G+++ A +F EMP RDVVSWNSMISG +S G + A+ +F +M+ G+RPS
Sbjct: 86 LKGFCRFGELQRAHNMFAEMPVRDVVSWNSMISGCVSGGFFDNAFCLFSKMQIAGMRPSE 145
Query: 570 FTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMM 391
+TFS ++S V C+ GKQ+H +IRNG + SNLI+GNSLIDMYGK G +DYA GVF++M
Sbjct: 146 YTFSIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLIDMYGKLGCVDYAFGVFFTME 205
Query: 390 EVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACSNLCNLE 223
EVD+ISWNSLISG + G ALD F MR + PDEFT+S+VI C NL NLE
Sbjct: 206 EVDIISWNSLISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVINVCCNLPNLE 261
Score = 87.0 bits (214), Expect(2) = 7e-90
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LED++ +F+ DSA+CNSMISSYARH E A FVL LREN+RPTEFTLS+LL
Sbjct: 293 NRLEDAIRLFEELDWWDSAVCNSMISSYARHECVEDALQLFVLTLRENLRPTEFTLSSLL 352
Query: 43 NCASAFIIVAQGSQ 2
N AS F+ GSQ
Sbjct: 353 NSASIFLPAELGSQ 366
Score = 104 bits (259), Expect = 7e-20
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K I A +K+GF +N+ + + ID++SK N DA+
Sbjct: 264 KQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAI------------------------ 299
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
+LF+E+ D NSMIS Y E A +F+ + +RP+ FT S+L+
Sbjct: 300 -------RLFEELDWWDSAVCNSMISSYARHECVEDALQLFVLTLRENLRPTEFTLSSLL 352
Query: 549 SSVKC---AFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDL 379
+S A +G Q+H V++ G + S+ IV +SLID Y K G+++YA+ +F ++ DL
Sbjct: 353 NSASIFLPAELGSQIHSLVVKLGFE-SDPIVASSLIDFYSKVGLINYAMKIFANVGVKDL 411
Query: 378 ISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACS 241
SWN++I G G L+ F + EG PD+ T++ V+ AC+
Sbjct: 412 TSWNTMIIGMAHNGKVFETLNIFEELISEGIAPDKLTLAGVLLACN 457
Score = 86.7 bits (213), Expect = 2e-14
Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Frame = -1
Query: 1014 LLTRVHIHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFN-TNTFLGNRCID 838
L +++ I P +TF ++S + K IH +I+ G N +N LGN ID
Sbjct: 132 LFSKMQIAGMRPSEYTF-----SIVMSLVTCSCHGKQIHGGMIRNGMNLSNLILGNSLID 186
Query: 837 MYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSM 658
MY K+ G ++ A +F M E D++SWNS+
Sbjct: 187 MYGKL-------------------------------GCVDYAFGVFFTMEEVDIISWNSL 215
Query: 657 ISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFI----GKQLHCCVIRNG 490
ISG G +E A F +MR P FT S++I+ V C GKQ+ ++ G
Sbjct: 216 ISGCHRSGYAELALDQFFQMRSTKHSPDEFTISSVIN-VCCNLPNLEKGKQIFAFCLKVG 274
Query: 489 ADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHF 310
SN I+ ++ ID++ K L+ AI +F + D NS+IS + + AL F
Sbjct: 275 F-LSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSMISSYARHECVEDALQLF 333
Query: 309 CLMRYEGYVPDEFTVSAVIAACS 241
L E P EFT+S+++ + S
Sbjct: 334 VLTLRENLRPTEFTLSSLLNSAS 356
Score = 66.2 bits (160), Expect = 2e-08
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDAL 802
P FT S+L++ F PA IH+ ++KLGF ++ + + ID YSKV L + A+
Sbjct: 343 PTEFTL-SSLLNSASIFL-PAELGSQIHSLVVKLGFESDPIVASSLIDFYSKVGLINYAM 400
Query: 801 NVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISG-YISC---G 634
+F +G +++ SWN + + G + +F+E+ + ++G ++C G
Sbjct: 401 KIFANVGVKDLTSWNTMIIGMAHNGKVFETLNIFEELISEGIAPDKLTLAGVLLACNLGG 460
Query: 633 TSEKAWVVFLEMRK-YGVRP 577
++ +FL M K YG+ P
Sbjct: 461 LVDEGMTMFLSMEKEYGIVP 480
>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 271 bits (694), Expect(2) = 6e-89
Identities = 133/223 (59%), Positives = 170/223 (76%)
Frame = -1
Query: 891 LIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENA 712
LIK+GFNT+TFLGNRC+D+YS++ +D+L VF++I ++N+ SWNI LK V+ G++E A
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 711 RQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCA 532
R +FDEMP+RDVVSWN+MISGY+S G + A+ F EM+K G+RPS FT+S L+S V A
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855
Query: 531 FIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISG 352
GKQ+H +IRNG D SN++VGNSLI MYGK GV+DYA GVF +M E+D+ISWNSLI
Sbjct: 856 CRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWS 915
Query: 351 FCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACSNLCNLE 223
K G +N AL F LMR GY PD+FTVS VI CSNL +LE
Sbjct: 916 CGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLE 958
Score = 84.3 bits (207), Expect(2) = 6e-89
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F+ DS LCN+MISSYA HG E A FVL LREN+RPTEFTLS +L
Sbjct: 990 NRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVL 1049
Query: 43 NCASAFIIVAQGSQ 2
+ S + V QGSQ
Sbjct: 1050 SAVSILLPVDQGSQ 1063
Score = 126 bits (316), Expect = 2e-26
Identities = 73/229 (31%), Positives = 121/229 (52%), Gaps = 3/229 (1%)
Frame = -1
Query: 903 IHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGD 724
+HA + K+GF + + + +DMYSK DA +F ++ + N + G
Sbjct: 327 VHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGR 386
Query: 723 IENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLIS- 547
I++ARQ+FD MP + ++SWNSMI G+ +A +F EM K G+R F+ + +IS
Sbjct: 387 IDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISA 446
Query: 546 --SVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLIS 373
S+ +G+Q+ G ++ I+ SL+D Y K G++++ +F MM+ D +
Sbjct: 447 CASISSLELGEQIFARATIIGLEFDQ-IISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVP 505
Query: 372 WNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACSNLCNL 226
WNS++ G+ G AL+ F MR G P + T V++AC + C L
Sbjct: 506 WNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDH-CGL 553
Score = 109 bits (273), Expect(2) = 2e-24
Identities = 77/264 (29%), Positives = 132/264 (50%), Gaps = 34/264 (12%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K IHA+++ ++ LG+ +++Y K A +V + + E + FS + +
Sbjct: 193 KQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASC 252
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
G + +AR++F VV WNSMISGY++ + +A +F MR+ GV+ TF++++
Sbjct: 253 GRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVL 312
Query: 549 SSVKCAFI---GKQLHCCVIRNGADYSNLIVGNSLIDMYGK------------------- 436
S+ I G Q+H V + G +++I+ ++L+DMY K
Sbjct: 313 SACSTLGIIDQGIQVHAHVYKVGFT-NDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDT 371
Query: 435 ------------AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYE 292
G +D A +F +M LISWNS+I GF + ALD FC M
Sbjct: 372 ILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKL 431
Query: 291 GYVPDEFTVSAVIAACSNLCNLEM 220
G D+F+++ VI+AC+++ +LE+
Sbjct: 432 GLRMDKFSLAGVISACASISSLEL 455
Score = 30.4 bits (67), Expect(2) = 2e-24
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -3
Query: 217 LEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLLNC 38
+E +FD D NSM+ YA +G +A + F ++PT+ T +L+
Sbjct: 488 VEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSA 547
Query: 37 ASAFIIVAQG 8
+V +G
Sbjct: 548 CDHCGLVEEG 557
Score = 107 bits (268), Expect = 7e-21
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 37/248 (14%)
Frame = -1
Query: 867 NTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMP 688
N F N I+ Y K +L +FD + ++ FSWN+ + K G++E AR+LF+EMP
Sbjct: 72 NCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLFNEMP 131
Query: 687 ERDVVSWNSMISGYISCGTSEKAWVVFLEM------RKYGVRPSVFTFSNLISSVKCAFI 526
++ ++WNSMI GY G ++A +F ++ R G + T +++
Sbjct: 132 WKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDC 191
Query: 525 GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFC 346
GKQ+H ++ + ++ + ++G+SL+++YGK G +D A V M E D S ++LISG+
Sbjct: 192 GKQIHARIVVDEVEFDS-VLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYA 250
Query: 345 KWGLENFALDHFCL-------------------------------MRYEGYVPDEFTVSA 259
G N A FCL MR +G D T ++
Sbjct: 251 SCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFAS 310
Query: 258 VIAACSNL 235
V++ACS L
Sbjct: 311 VLSACSTL 318
Score = 107 bits (268), Expect = 7e-21
Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 3/226 (1%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
+ I A I++GF +N+ + + ID++SK N D++ VF+EI + W
Sbjct: 961 EQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEI-----YQW---------- 1005
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
D V N+MIS Y G E A +F+ + +RP+ FT S ++
Sbjct: 1006 ----------------DSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVL 1049
Query: 549 SSVKCAFI---GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDL 379
S+V G Q+H V+++G + S++IV +SL++MY K G++D A+ F + DL
Sbjct: 1050 SAVSILLPVDQGSQIHSLVVKSGLE-SDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDL 1108
Query: 378 ISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACS 241
ISWN++I G G + AL+ F + G PDE T++ V+ AC+
Sbjct: 1109 ISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACN 1154
Score = 70.1 bits (170), Expect = 2e-09
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Frame = -1
Query: 735 KVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSN 556
K G +E+ R+LFD M + D V WNSM+ GY + G +A VF +MR GV+P+ TF
Sbjct: 484 KCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVG 543
Query: 555 LISSVKCAFIGKQLHCCVIRNGA--------DYS---NLIVGNSLIDMYGKAGVLDYAIG 409
++S+ HC ++ G DY + + ++D+Y +AG+L+ A+
Sbjct: 544 VLSACD--------HCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMN 595
Query: 408 VFWSM-MEVDLISWNSLISG 352
+ M ++ D W+S++ G
Sbjct: 596 LIEQMPLKADTSMWSSVLRG 615
Score = 62.0 bits (149), Expect = 4e-07
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDAL 802
P FT +++ +S P + IH+ ++K G ++ + + ++MY+K L A+
Sbjct: 1040 PTEFTL--SIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAM 1097
Query: 801 NVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEM----PERDVVSWNSMISGYISCG 634
F +IG R++ SWN + L G + A ++F E+ P D ++ ++ G
Sbjct: 1098 KTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGG 1157
Query: 633 TSEKAWVVFLEMRK-YGVRPSVFTFSNLI 550
++ +F M K YGV P++ ++ ++
Sbjct: 1158 LVDEGLSIFSSMEKEYGVIPAIEHYACIV 1186
>ref|XP_002306667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856116|gb|EEE93663.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 630
Score = 280 bits (715), Expect(2) = 2e-88
Identities = 147/267 (55%), Positives = 187/267 (70%)
Frame = -1
Query: 1023 MHPLLTRVHIHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 844
M+PL+ + H R S ++YS LID S K +FA+ HAQLIK+G N +TFLGNRC
Sbjct: 1 MYPLIKQCH--RVSRTSLSYYSYLIDHCFSL-KSLSFARITHAQLIKVGLNRHTFLGNRC 57
Query: 843 IDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWN 664
+D+YS+ +DAL VFD+I +NI SWNICLK L+K ++ A +FD+MPERDVVSWN
Sbjct: 58 LDLYSQFGNVNDALKVFDDISSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWN 117
Query: 663 SMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGAD 484
SMISGY S G + A F EM+K GVRPS FT+S L+S V GK++H ++R+G
Sbjct: 118 SMISGYASRGYFDCALETFWEMQKLGVRPSEFTYSILMSVVFGVRHGKEIHGSIVRSGLG 177
Query: 483 YSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCL 304
N+++GNSLIDMYGK LDYA+GVF +M E+D+ISWNSLIS C+ G ALD FC+
Sbjct: 178 ALNVVLGNSLIDMYGKFSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCI 237
Query: 303 MRYEGYVPDEFTVSAVIAACSNLCNLE 223
MR GY PDEF+VS VI +C NL NLE
Sbjct: 238 MRSLGYSPDEFSVSVVITSCLNLRNLE 264
Score = 74.3 bits (181), Expect(2) = 2e-88
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F+ DSA+CNSMISSYAR G E FVL L+++IRPTEFTLS++L
Sbjct: 296 NRLEDSVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVL 355
Query: 43 NCASAFIIVAQGSQ 2
+ +++ + + QG+Q
Sbjct: 356 H-STSILKLEQGTQ 368
Score = 106 bits (265), Expect = 1e-20
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K I A +K+GF NT + + ID++SK N D++
Sbjct: 267 KQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSV------------------------ 302
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
+LF+E + D NSMIS Y CG E +F+ K +RP+ FT S+++
Sbjct: 303 -------RLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTEFTLSSVL 355
Query: 549 SSVKCAFI--GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLI 376
S + G Q H +++G + + IV +SL++MY K G +D +I +F M+ DLI
Sbjct: 356 HSTSILKLEQGTQFHSLAVKSGLEL-DAIVASSLVEMYSKFGFIDCSIKIFNKMVARDLI 414
Query: 375 SWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACS 241
+WN++I G G AL F + G PD T++ V+ ACS
Sbjct: 415 AWNTMIMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGVLLACS 459
Score = 83.2 bits (204), Expect = 2e-13
Identities = 74/253 (29%), Positives = 108/253 (42%), Gaps = 4/253 (1%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNT-NTFLGNRCIDMYSKVNLFHDA 805
P FT YS L+ + R K IH +++ G N LGN IDMY K + A
Sbjct: 146 PSEFT-YSILMSVVFGVRH----GKEIHGSIVRSGLGALNVVLGNSLIDMYGKFSSLDYA 200
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
L VF M E DV+SWNS+IS G E
Sbjct: 201 LGVFLT-------------------------------MEELDVISWNSLISVCCQSGYPE 229
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLISS---VKCAFIGKQLHCCVIRNGADYSNLIVGNSL 454
A F MR G P F+ S +I+S ++ GKQ+ ++ G N I+ ++
Sbjct: 230 LALDKFCIMRSLGYSPDEFSVSVVITSCLNLRNLEKGKQIFALCVKVGF-LCNTIISSAT 288
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDE 274
ID++ K L+ ++ +F + D NS+IS + + G L F L + P E
Sbjct: 289 IDLFSKCNRLEDSVRLFEEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKDIRPTE 348
Query: 273 FTVSAVIAACSNL 235
FT+S+V+ + S L
Sbjct: 349 FTLSSVLHSTSIL 361
>gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 645
Score = 268 bits (685), Expect(2) = 1e-85
Identities = 140/251 (55%), Positives = 174/251 (69%)
Frame = -1
Query: 975 SFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 796
S + Y+NLI+ LS K FA++IHAQLIK GF TFLGN +++Y KV F+DA V
Sbjct: 15 SLSHYTNLINHCLSL-KSIQFAQTIHAQLIKFGFGRITFLGNCFVNLYFKVGSFNDASKV 73
Query: 795 FDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAW 616
FDEI ++NI SWNI L L+K G + A +FDEMP +DVVSWNSMISG G
Sbjct: 74 FDEINDKNIISWNIFLNGLLKFGHFKKACLMFDEMPAKDVVSWNSMISGCGWLGFWGYGL 133
Query: 615 VVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
VF EM GVRPS FTFS L + V CA GK++H +I +G SNL++GNSLIDMYGK
Sbjct: 134 AVFKEMHNCGVRPSKFTFSILTTFVSCASQGKEIHGNIITSGVGLSNLVIGNSLIDMYGK 193
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
G++DYA GVF++M EVD++SWNSLISG C G E+ AL F MR+ GY PDEFT+S V
Sbjct: 194 LGLVDYAFGVFFNMEEVDVVSWNSLISGCCNSGYEDMALKQFDQMRFAGYSPDEFTISNV 253
Query: 255 IAACSNLCNLE 223
I+ C+NL NL+
Sbjct: 254 ISVCTNLRNLD 264
Score = 77.0 bits (188), Expect(2) = 1e-85
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F+ DS LC+SMISSYARHG ++ A FVL LRE+ RPTEF +S +L
Sbjct: 296 NRLEDSVKLFEEVERWDSVLCSSMISSYARHGLQDDALLLFVLSLREDCRPTEFAISIVL 355
Query: 43 NCASAFIIVAQGSQ 2
+C + FI QG Q
Sbjct: 356 SCIT-FISAEQGHQ 368
Score = 103 bits (256), Expect = 2e-19
Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 2/248 (0%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDAL 802
P FT SN+I + R + K I A +K+GF +N+ + + ID++SK N D++
Sbjct: 245 PDEFTI-SNVISVCTNLRN-LDKGKEIFALCVKVGFISNSIVSSATIDLFSKCNRLEDSV 302
Query: 801 NVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEK 622
+LF+E+ D V +SMIS Y G +
Sbjct: 303 -------------------------------KLFEEVERWDSVLCSSMISSYARHGLQDD 331
Query: 621 AWVVFLEMRKYGVRPSVFTFSNLISSVK--CAFIGKQLHCCVIRNGADYSNLIVGNSLID 448
A ++F+ + RP+ F S ++S + A G Q+H VI++G + S IV SL+D
Sbjct: 332 ALLLFVLSLREDCRPTEFAISIVLSCITFISAEQGHQVHSLVIKSGFE-SESIVACSLVD 390
Query: 447 MYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFT 268
MY K G++D A+ +F M D+ISWN+LI G G L+ + + EG PD T
Sbjct: 391 MYAKIGLIDPAMQIFSEMHVKDIISWNTLIMGLAHNGRAVETLEIYKELLREGPAPDRIT 450
Query: 267 VSAVIAAC 244
++ V+ AC
Sbjct: 451 LAGVLLAC 458
Score = 94.0 bits (232), Expect = 1e-16
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFN-TNTFLGNRCIDMYSKVNLFHDA 805
P FTF + +F A+ K IH +I G +N +GN IDMY K+ L A
Sbjct: 146 PSKFTF-----SILTTFVSCASQGKEIHGNIITSGVGLSNLVIGNSLIDMYGKLGLVDYA 200
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
V F M E DVVSWNS+ISG + G +
Sbjct: 201 FGV-------------------------------FFNMEEVDVVSWNSLISGCCNSGYED 229
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSL 454
A F +MR G P FT SN+IS +++ GK++ ++ G SN IV ++
Sbjct: 230 MALKQFDQMRFAGYSPDEFTISNVISVCTNLRNLDKGKEIFALCVKVGF-ISNSIVSSAT 288
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDE 274
ID++ K L+ ++ +F + D + +S+IS + + GL++ AL F L E P E
Sbjct: 289 IDLFSKCNRLEDSVKLFEEVERWDSVLCSSMISSYARHGLQDDALLLFVLSLREDCRPTE 348
Query: 273 FTVSAVIA 250
F +S V++
Sbjct: 349 FAISIVLS 356
>ref|XP_006472888.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Citrus sinensis]
Length = 640
Score = 281 bits (720), Expect(2) = 2e-85
Identities = 144/267 (53%), Positives = 188/267 (70%)
Frame = -1
Query: 1023 MHPLLTRVHIHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 844
M L + H+++ S ++ S LID LSF K +FAK+IH L KLGFN +T+LGNRC
Sbjct: 1 MSSYLKKAHVNK---ASLSYCSQLIDRCLSF-KSFDFAKTIHGHLFKLGFNAHTYLGNRC 56
Query: 843 IDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWN 664
+D+YS+ D L +FDEI ++N SWNICL+ L+K +++ A ++FDE+PE DVVSWN
Sbjct: 57 LDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWN 116
Query: 663 SMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGAD 484
SMISGY SCG S+ A +F +M+ GVRPS FTFS L+S+V A GKQ+H +IR+G
Sbjct: 117 SMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLS 176
Query: 483 YSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCL 304
SN+++GNSLIDMYGK GVL YA GVF +M E+D+ISWNSLISG G ALD F
Sbjct: 177 LSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYS 236
Query: 303 MRYEGYVPDEFTVSAVIAACSNLCNLE 223
MRY G PDE+T+S +I AC+ L NL+
Sbjct: 237 MRYSGNSPDEYTISIIINACTKLRNLD 263
Score = 62.4 bits (150), Expect(2) = 2e-85
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F+ D A+ N MISSY R+G E A F L LRE+IRPTEFTLS +L
Sbjct: 295 NRLEDSVRLFEQLDRWDYAVINVMISSYGRYGFGEVALELFQLMLREDIRPTEFTLSCVL 354
Query: 43 N 41
+
Sbjct: 355 S 355
Score = 102 bits (253), Expect = 4e-19
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K + A +K+GF +N+ + + ID++SK N D++
Sbjct: 266 KQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSV------------------------ 301
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
+LF+++ D N MIS Y G E A +F M + +RP+ FT S ++
Sbjct: 302 -------RLFEQLDRWDYAVINVMISSYGRYGFGEVALELFQLMLREDIRPTEFTLSCVL 354
Query: 549 SSVKCAFI--GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLI 376
SS+ + G Q H I++G D SN +V +SL++MY K G +D + +F + + DL+
Sbjct: 355 SSIPIPPVEHGSQFHSMAIKSGFD-SNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLV 413
Query: 375 SWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACS 241
SWN+++ G + G LD F + EG PD T+ AV+ AC+
Sbjct: 414 SWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLVAVLLACN 458
>ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cicer arietinum]
Length = 643
Score = 252 bits (644), Expect(2) = 5e-80
Identities = 127/251 (50%), Positives = 175/251 (69%)
Frame = -1
Query: 975 SFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 796
S ++ S L+ LS + P F K++HA+ +KLG NT T+LGNR ID+Y++ +DAL V
Sbjct: 14 SLSYCSFLLHHCLSHKSPY-FLKTVHARFLKLGLNTYTYLGNRIIDLYTEFGHINDALKV 72
Query: 795 FDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAW 616
FD+I +N SWNICLK LVK G ++NA +FDEMP RDVVSWN++ISGY S G S A
Sbjct: 73 FDDISYKNSTSWNICLKGLVKSGQLDNACHMFDEMPVRDVVSWNTLISGYASYGFSSHAL 132
Query: 615 VVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
+F+EM+ GV+PS FTFS L S V KQ+H +IR+G D SN+++GNSLI MYGK
Sbjct: 133 ELFVEMQSTGVKPSWFTFSILTSLVSSPCHAKQVHGRMIRSGMDLSNVVLGNSLIAMYGK 192
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
G++DY+ VF++M ++D+ISWNSL+ C+ + AL+ FC MR +PD+FT S +
Sbjct: 193 LGLVDYSFDVFFTMKQLDVISWNSLMWACCRADCQELALEQFCYMRAAELLPDQFTCSIL 252
Query: 255 IAACSNLCNLE 223
++ CSNL +LE
Sbjct: 253 MSVCSNLRDLE 263
Score = 73.9 bits (180), Expect(2) = 5e-80
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LED+V +F +SALCNSMIS YARH E A FVL LR+NI PTE+T+S LL
Sbjct: 295 NRLEDAVRLFKEHEQWNSALCNSMISCYARHDLGEDALQLFVLTLRKNIMPTEYTVSCLL 354
Query: 43 NCASAFIIVAQGSQ 2
+ + F+ + G+Q
Sbjct: 355 SSVTIFLPIEVGNQ 368
Score = 100 bits (248), Expect = 1e-18
Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 3/251 (1%)
Frame = -1
Query: 984 LPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDA 805
LP FT +++ + S + K + A K+GF N+ + + ID++SK N DA
Sbjct: 243 LPDQFT--CSILMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDA 300
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
+ +F E + WN L NSMIS Y E
Sbjct: 301 VRLFKEHEQ-----WNSAL--------------------------CNSMISCYARHDLGE 329
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLISSVKCAF---IGKQLHCCVIRNGADYSNLIVGNSL 454
A +F+ + + P+ +T S L+SSV +G Q+H V + G + S+ +V +SL
Sbjct: 330 DALQLFVLTLRKNIMPTEYTVSCLLSSVTIFLPIEVGNQIHALVPKLGFE-SDTVVVSSL 388
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDE 274
+DMY K G +D A+ +F + DL++WN+++ G G + +D F + EG PD+
Sbjct: 389 VDMYAKFGFIDDALNIFNEIKTKDLVTWNTIMMGLSYNGKVSVTIDLFKELVREGTPPDQ 448
Query: 273 FTVSAVIAACS 241
T +AV+ AC+
Sbjct: 449 ITFAAVLLACN 459
Score = 73.2 bits (178), Expect = 2e-10
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFN-TNTFLGNRCIDMYSKVNLFHDA 805
P FTF +++ ++S P + AK +H ++I+ G + +N LGN I MY K+ L
Sbjct: 145 PSWFTF--SILTSLVS--SPCH-AKQVHGRMIRSGMDLSNVVLGNSLIAMYGKLGL---- 195
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
++ + +F M + DV+SWNS++ E
Sbjct: 196 ---------------------------VDYSFDVFFTMKQLDVISWNSLMWACCRADCQE 228
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSL 454
A F MR + P FT S L+S +++ GKQ+ + G Y N IV ++
Sbjct: 229 LALEQFCYMRAAELLPDQFTCSILMSVCSNLRDLEKGKQVFAFCFKVGFVY-NSIVSSAA 287
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDE 274
ID++ K L+ A+ +F + + NS+IS + + L AL F L + +P E
Sbjct: 288 IDLFSKCNRLEDAVRLFKEHEQWNSALCNSMISCYARHDLGEDALQLFVLTLRKNIMPTE 347
Query: 273 FTVSAVIAACSNLCNLEM 220
+TVS ++++ + +E+
Sbjct: 348 YTVSCLLSSVTIFLPIEV 365
>ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 243 bits (621), Expect(2) = 7e-79
Identities = 127/267 (47%), Positives = 172/267 (64%)
Frame = -1
Query: 1023 MHPLLTRVHIHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 844
M+PLL + + P S Y +L+ +K NF K +HA +KLG NT T+LGNRC
Sbjct: 1 MYPLLKQA----QGPYSSLSYCSLLLNHCLSKKSLNFVKIVHAHFLKLGLNTYTYLGNRC 56
Query: 843 IDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWN 664
+D+YS+ +DA VFD+I +N SWNICLK L+K G A LFD MP RDVV+WN
Sbjct: 57 LDLYSEFGHLNDAPKVFDDISHKNSTSWNICLKWLLKSGQFGKACHLFDAMPVRDVVTWN 116
Query: 663 SMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGAD 484
SMISGY SCG A +F+EM+ GVRPS FTFS L+S V KQ+H +IR+G D
Sbjct: 117 SMISGYASCGYFSHALELFVEMQGTGVRPSGFTFSILMSLVSSPSHAKQIHSRMIRSGVD 176
Query: 483 YSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCL 304
N+++GNSLI MYG+ G+++Y+ GV +M + D+ISWNSLI + G AL+ F
Sbjct: 177 LDNVVLGNSLITMYGRLGLVEYSFGVIMTMKQFDVISWNSLIWACHRAGHHELALEQFYW 236
Query: 303 MRYEGYVPDEFTVSAVIAACSNLCNLE 223
MR ++PD+FT S +++ CSNL +L+
Sbjct: 237 MRGAEFLPDQFTCSVLMSVCSNLRDLD 263
Score = 79.0 bits (193), Expect(2) = 7e-79
Identities = 42/74 (56%), Positives = 50/74 (67%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F DSALCNSMISSYARH E FVL LR+NIRPTE+ +S+LL
Sbjct: 295 NRLEDSVRLFKEQDQWDSALCNSMISSYARHYLGEDTLQLFVLTLRKNIRPTEYMVSSLL 354
Query: 43 NCASAFIIVAQGSQ 2
+ S F+ V G+Q
Sbjct: 355 SSVSIFLPVEVGNQ 368
Score = 102 bits (255), Expect = 2e-19
Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 4/252 (1%)
Frame = -1
Query: 984 LPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDA 805
LP FT +++ + S + + K + A K+GF N+ + + ID++SK N D+
Sbjct: 243 LPDQFT--CSVLMSVCSNLRDLDKGKQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLEDS 300
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
+ +LF E + D NSMIS Y E
Sbjct: 301 V-------------------------------RLFKEQDQWDSALCNSMISSYARHYLGE 329
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLISSVKCAF---IGKQLHCCVIRNGADYSNLIVGNSL 454
+F+ + +RP+ + S+L+SSV +G Q+H V + G + S+ +V NSL
Sbjct: 330 DTLQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIHSLVPKLGFE-SDAVVANSL 388
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFC-LMRYEGYVPD 277
+ MY K G ++ A+ +F M DL+SWN+++ G +G + +D F L+ EG +PD
Sbjct: 389 VHMYAKFGFINDALNIFNEMKIKDLVSWNTIMMGLTYYGRVSLTMDLFRELLTREGMLPD 448
Query: 276 EFTVSAVIAACS 241
T++AV+ AC+
Sbjct: 449 RITLTAVLLACN 460
Score = 70.5 bits (171), Expect(2) = 5e-10
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 4/258 (1%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNT-NTFLGNRCIDMYSKVNLFHDA 805
P FTF ++S + AK IH+++I+ G + N LGN I MY ++ L
Sbjct: 145 PSGFTF-----SILMSLVSSPSHAKQIHSRMIRSGVDLDNVVLGNSLITMYGRLGLVE-- 197
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
+S+ + + M + DV+SWNS+I G E
Sbjct: 198 ------------YSFGVIMT-----------------MKQFDVISWNSLIWACHRAGHHE 228
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSL 454
A F MR P FT S L+S +++ GKQ+ + G Y N IV ++
Sbjct: 229 LALEQFYWMRGAEFLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFKMGFVY-NSIVSSAA 287
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDE 274
ID++ K L+ ++ +F + D NS+IS + + L L F L + P E
Sbjct: 288 IDLFSKCNRLEDSVRLFKEQDQWDSALCNSMISSYARHYLGEDTLQLFVLTLRKNIRPTE 347
Query: 273 FTVSAVIAACSNLCNLEM 220
+ VS+++++ S +E+
Sbjct: 348 YMVSSLLSSVSIFLPVEV 365
Score = 21.2 bits (43), Expect(2) = 5e-10
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3
Query: 175 DSALCNSMISSYARHGSEEKAFHTF 101
D+ + NS++ YA+ G A + F
Sbjct: 381 DAVVANSLVHMYAKFGFINDALNIF 405
>ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 242 bits (618), Expect(2) = 3e-78
Identities = 131/268 (48%), Positives = 174/268 (64%), Gaps = 1/268 (0%)
Frame = -1
Query: 1023 MHPLLTRVH-IHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNR 847
M+PLL + + L C S L++ LS +K N K +HA +KLG NT T+LGNR
Sbjct: 1 MYPLLKQAQGPYPSLSCC----SLLLNHCLS-QKSLNCVKIVHAHFLKLGLNTYTYLGNR 55
Query: 846 CIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSW 667
C+D+YS+ +DAL VFD+I +N SWNICLK L+K G A +FD MP RDVVSW
Sbjct: 56 CLDLYSEFGHINDALKVFDDISHKNSTSWNICLKGLLKSGQPGKACHMFDAMPVRDVVSW 115
Query: 666 NSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGA 487
NSMISGY SCG A +F+EM+ GVRPS FTFS L+S V + KQ+HC +IR+G
Sbjct: 116 NSMISGYASCGYLSHALELFVEMQGTGVRPSGFTFSILMSLVSSSPHAKQIHCRMIRSGV 175
Query: 486 DYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFC 307
D N+++GNSLI++YGK G+++YA GV M + D+ISWNSLI G AL+ F
Sbjct: 176 DLDNVVLGNSLINIYGKLGLVEYAFGVIMIMKQFDVISWNSLIWACHSAGHHELALEQFY 235
Query: 306 LMRYEGYVPDEFTVSAVIAACSNLCNLE 223
MR +PD+FT S +++ CSNL +L+
Sbjct: 236 RMRGAELLPDQFTCSVLMSVCSNLRDLD 263
Score = 78.2 bits (191), Expect(2) = 3e-78
Identities = 41/74 (55%), Positives = 50/74 (67%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F DS LCNSMISS+ARH E A FVL LR+NIRPTE+ +S+LL
Sbjct: 295 NRLEDSVRLFKKQDQWDSPLCNSMISSFARHDLGENALQLFVLTLRKNIRPTEYMVSSLL 354
Query: 43 NCASAFIIVAQGSQ 2
+ S F+ V G+Q
Sbjct: 355 SSVSIFLPVEVGNQ 368
Score = 103 bits (257), Expect = 1e-19
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 4/252 (1%)
Frame = -1
Query: 984 LPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDA 805
LP FT +++ + S + + K + A K+GF N+ + + ID++SK N D+
Sbjct: 243 LPDQFT--CSVLMSVCSNLRDLDKGKQVFAFCFKMGFIYNSIVSSAAIDLFSKCNRLEDS 300
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
+ +LF + + D NSMIS + E
Sbjct: 301 V-------------------------------RLFKKQDQWDSPLCNSMISSFARHDLGE 329
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLISSVKCAF---IGKQLHCCVIRNGADYSNLIVGNSL 454
A +F+ + +RP+ + S+L+SSV +G Q+H V + G + S+ +V NSL
Sbjct: 330 NALQLFVLTLRKNIRPTEYMVSSLLSSVSIFLPVEVGNQIHSLVPKLGFE-SDAVVANSL 388
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFC-LMRYEGYVPD 277
+DMY K G + A+ +F M DL+SWN+++ G +G + +D F L+ EG +PD
Sbjct: 389 VDMYAKFGFIGDALNIFNEMKIKDLVSWNTIMMGLTYYGRVSLTMDLFRELLTREGILPD 448
Query: 276 EFTVSAVIAACS 241
T++AV+ AC+
Sbjct: 449 RITLTAVLLACN 460
Score = 77.0 bits (188), Expect(2) = 8e-12
Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 4/258 (1%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNT-NTFLGNRCIDMYSKVNLFHDA 805
P FTF ++S + AK IH ++I+ G + N LGN I++Y K+ L
Sbjct: 145 PSGFTF-----SILMSLVSSSPHAKQIHCRMIRSGVDLDNVVLGNSLINIYGKLGL---- 195
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
+E A + M + DV+SWNS+I S G E
Sbjct: 196 ---------------------------VEYAFGVIMIMKQFDVISWNSLIWACHSAGHHE 228
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSL 454
A F MR + P FT S L+S +++ GKQ+ + G Y N IV ++
Sbjct: 229 LALEQFYRMRGAELLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFKMGFIY-NSIVSSAA 287
Query: 453 IDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDE 274
ID++ K L+ ++ +F + D NS+IS F + L AL F L + P E
Sbjct: 288 IDLFSKCNRLEDSVRLFKKQDQWDSPLCNSMISSFARHDLGENALQLFVLTLRKNIRPTE 347
Query: 273 FTVSAVIAACSNLCNLEM 220
+ VS+++++ S +E+
Sbjct: 348 YMVSSLLSSVSIFLPVEV 365
Score = 20.8 bits (42), Expect(2) = 8e-12
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3
Query: 175 DSALCNSMISSYARHGSEEKAFHTF 101
D+ + NS++ YA+ G A + F
Sbjct: 381 DAVVANSLVDMYAKFGFIGDALNIF 405
Score = 61.6 bits (148), Expect = 5e-07
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 7/215 (3%)
Frame = -1
Query: 960 SNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIG 781
S+L+ + F P IH+ + KLGF ++ + N +DMY+K DALN+F+E+
Sbjct: 351 SSLLSSVSIFL-PVEVGNQIHSLVPKLGFESDAVVANSLVDMYAKFGFIGDALNIFNEMK 409
Query: 780 ERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWN--SMISGYISCGTS---EKAW 616
+++ SWN + L G + LF E+ R+ + + ++ + ++C ++
Sbjct: 410 IKDLVSWNTIMMGLTYYGRVSLTMDLFRELLTREGILPDRITLTAVLLACNYGLLVDEGI 469
Query: 615 VVFLEMR-KYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYG 439
+F M ++GV+P G++ + CV ++M
Sbjct: 470 KIFSSMEMEFGVKP-----------------GEEHYACV----------------VEMLS 496
Query: 438 KAGVLDYAIGVFWSM-MEVDLISWNSLISGFCKWG 337
KAG L AI + +M W S++S +G
Sbjct: 497 KAGKLKEAIDIIETMPCRTTSDIWRSILSACAIYG 531
>ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 258 bits (660), Expect(2) = 8e-77
Identities = 132/248 (53%), Positives = 171/248 (68%)
Frame = -1
Query: 963 YSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEI 784
YS+LI L N AK+IH QL+KLG ++NTFL NRC+ +Y+ HD L VFD I
Sbjct: 19 YSSLIRRCLVLGSVHN-AKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVFDGI 77
Query: 783 GERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFL 604
++NI SWNICLK + + GD++ AR LFD MPERD+VSWN+MISGY+S G A V L
Sbjct: 78 KDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFGNSAMGVSL 137
Query: 603 EMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVL 424
EM+ G RPS +TFS L+S V AF GKQ+H +IR+G D S++++GNSLIDMYGK G++
Sbjct: 138 EMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLV 197
Query: 423 DYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAAC 244
DY +F SM +VD+ISWNSLI G + G AL+ F LMR + PD+FT+S VI+ C
Sbjct: 198 DYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC 257
Query: 243 SNLCNLEM 220
L LE+
Sbjct: 258 CCLQELEL 265
Score = 57.0 bits (136), Expect(2) = 8e-77
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
+ L+ +V +F+ + D LCN MISS+A HG + FV LREN+ P + TLS++L
Sbjct: 296 DSLKVAVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVL 355
Query: 43 NCASAFIIVAQGSQ 2
+ S F V GSQ
Sbjct: 356 SSISVFTPVELGSQ 369
Score = 92.8 bits (229), Expect = 2e-16
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Frame = -1
Query: 966 FYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDE 787
F +++ I + K I A K+GF +N+ + + ID++SK D+L V
Sbjct: 248 FTISMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKC----DSLKV--- 300
Query: 786 IGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVF 607
A QLF++ + D V N MIS + G + +F
Sbjct: 301 ------------------------AVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLF 336
Query: 606 LEMRKYGVRPSVFTFSNLISSVKC---AFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
+ + + P T S+++SS+ +G Q+H V++ G S++IV +SL+DMY K
Sbjct: 337 VYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLGFQ-SDVIVTSSLVDMYAK 395
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
G +D A+ VF M DLISWN++I G G AL F + EG +PD T++ V
Sbjct: 396 VGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGV 455
Query: 255 IAACS 241
+ ACS
Sbjct: 456 LLACS 460
Score = 59.7 bits (143), Expect = 2e-06
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Frame = -1
Query: 969 TFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFD 790
T S+++ I F P IH ++KLGF ++ + + +DMY+KV DA+ VF
Sbjct: 349 TTLSSVLSSISVFT-PVELGSQIHNLVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFI 407
Query: 789 EIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISG-YISC---GTSEK 622
++ R++ SWN + LV G A F+++ V+ ++G ++C G E+
Sbjct: 408 DMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEE 467
Query: 621 AWVVFLEMR-KYGVRP 577
V+F +M ++GV P
Sbjct: 468 GLVIFSKMTYEHGVVP 483
>ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 257 bits (657), Expect(2) = 2e-76
Identities = 132/248 (53%), Positives = 171/248 (68%)
Frame = -1
Query: 963 YSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEI 784
YS+LI L N AK+IH QL+KLG ++NTFL NRC+ +Y+ HD L VFD I
Sbjct: 19 YSSLIRRCLVLGSVHN-AKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVFDGI 77
Query: 783 GERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFL 604
++NI SWNICLK + + GD++ AR LFD MPERD+VSWN+MISGY+S G A V L
Sbjct: 78 KDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFVNSAMGVSL 137
Query: 603 EMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVL 424
EM+ G RPS +TFS L+S V AF GKQ+H +IR+G D S++++GNSLIDMYGK G++
Sbjct: 138 EMQNAGFRPSEYTFSILLSLVPSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLV 197
Query: 423 DYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAAC 244
DY +F SM +VD+ISWNSLI G + G AL+ F LMR + PD+FT+S VI+ C
Sbjct: 198 DYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC 257
Query: 243 SNLCNLEM 220
L LE+
Sbjct: 258 CCLQELEL 265
Score = 57.0 bits (136), Expect(2) = 2e-76
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
+ L+ +V +F+ + D LCN MISS+A HG + FV LREN+ P + TLS++L
Sbjct: 296 DSLKVAVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVL 355
Query: 43 NCASAFIIVAQGSQ 2
+ S F V GSQ
Sbjct: 356 SSISVFTPVELGSQ 369
Score = 92.8 bits (229), Expect = 2e-16
Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Frame = -1
Query: 966 FYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDE 787
F +++ I + K I A K+GF +N+ + + ID++SK D+L V
Sbjct: 248 FTISMVISICCCLQELELGKQIFAFCFKMGFTSNSIVLSATIDLFSKC----DSLKV--- 300
Query: 786 IGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVF 607
A QLF++ + D V N MIS + G + +F
Sbjct: 301 ------------------------AVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLF 336
Query: 606 LEMRKYGVRPSVFTFSNLISSVKC---AFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
+ + + P T S+++SS+ +G Q+H V++ G S++IV +SL+DMY K
Sbjct: 337 VYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLGFQ-SDVIVTSSLVDMYAK 395
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
G +D A+ VF M DLISWN++I G G AL F + EG +PD T++ V
Sbjct: 396 VGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGV 455
Query: 255 IAACS 241
+ ACS
Sbjct: 456 LLACS 460
Score = 59.7 bits (143), Expect = 2e-06
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Frame = -1
Query: 969 TFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFD 790
T S+++ I F P IH ++KLGF ++ + + +DMY+KV DA+ VF
Sbjct: 349 TTLSSVLSSISVFT-PVELGSQIHNLVLKLGFQSDVIVTSSLVDMYAKVGSIDDAMKVFI 407
Query: 789 EIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISG-YISC---GTSEK 622
++ R++ SWN + LV G A F+++ V+ ++G ++C G E+
Sbjct: 408 DMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGLVEE 467
Query: 621 AWVVFLEMR-KYGVRP 577
V+F +M ++GV P
Sbjct: 468 GLVIFSKMTYEHGVVP 483
>ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata]
gi|297339814|gb|EFH70231.1| F9C16.15 [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 238 bits (607), Expect(2) = 1e-70
Identities = 126/253 (49%), Positives = 166/253 (65%)
Frame = -1
Query: 984 LPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDA 805
+P SF ++S L+D L + P + +HAQL+K GF T+ GNRC+ +Y K DA
Sbjct: 1 MPSSF-YFSRLVDRYLLSKCPT-LTRIVHAQLLKAGFIRTTYWGNRCLQLYFKSGAVIDA 58
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
+FD+I ++N SWN+CLK L K G + NA LFDEMPERDVVSWN+MISG++SCG E
Sbjct: 59 FRLFDDIPDKNTISWNVCLKGLFKNGFLNNALDLFDEMPERDVVSWNTMISGFVSCGFPE 118
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDM 445
A VF +M+++ +RP+ FTFS L S V C G+Q+H I +G SNL+V NSL+DM
Sbjct: 119 YAIRVFFDMQRWVIRPTEFTFSILASLVSCVRHGEQIHGNAICSGVSKSNLVVWNSLMDM 178
Query: 444 YGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTV 265
Y + GV DYAI VF +M E D+ISWN LI G + ALD F LMR PDE+TV
Sbjct: 179 YRRIGVFDYAISVFLTMEERDVISWNCLILCCSDSGNKEVALDQFWLMREMENKPDEYTV 238
Query: 264 SAVIAACSNLCNL 226
S V++ CS+L +L
Sbjct: 239 SMVVSICSDLQDL 251
Score = 56.6 bits (135), Expect(2) = 1e-70
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N L+DSV +F DS LCNSMI SY+ H E F++ +R++I P +FT S++L
Sbjct: 284 NRLDDSVKLFRQLEKWDSVLCNSMIGSYSWHCCGEDTLTLFIVAMRQSISPDKFTFSSVL 343
Query: 43 NCASAFIIVAQGSQ 2
+ +A +++ G+Q
Sbjct: 344 SSMNA-VMLGHGAQ 356
Score = 89.7 bits (221), Expect = 2e-15
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K A IK+GF N + IDM+SK N D++ +F R + W
Sbjct: 255 KQAIALCIKMGFLFNNIVLGSGIDMFSKCNRLDDSVKLF-----RQLEKW---------- 299
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
D V NSMI Y E +F+ + + P FTFS+++
Sbjct: 300 ----------------DSVLCNSMIGSYSWHCCGEDTLTLFIVAMRQSISPDKFTFSSVL 343
Query: 549 SSVKCAFIGK--QLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLI 376
SS+ +G Q+H + G D S+ V SL++MY K G +D A+GVF E DLI
Sbjct: 344 SSMNAVMLGHGAQVHALATKLGFD-SDTTVATSLMEMYFKTGSVDSAMGVFAITDEKDLI 402
Query: 375 SWNSLISGFCK--WGLENFALDHFCLMRYEGYVPDEFTVSAVIAAC 244
WN++I G + +E+ ++ + LM G PD T ++ AC
Sbjct: 403 FWNTVIMGLARNSRAVESLSVFNQLLMDERGLKPDRVTFMGILVAC 448
Score = 77.0 bits (188), Expect = 1e-11
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Frame = -1
Query: 786 IGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVF 607
+ + N+ WN + ++G + A +F M ERDV+SWN +I G E A F
Sbjct: 164 VSKSNLVVWNSLMDMYRRIGVFDYAISVFLTMEERDVISWNCLILCCSDSGNKEVALDQF 223
Query: 606 LEMRKYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
MR+ +P +T S ++S ++ GKQ I+ G ++N+++G+ IDM+ K
Sbjct: 224 WLMREMENKPDEYTVSMVVSICSDLQDLCKGKQAIALCIKMGFLFNNIVLGSG-IDMFSK 282
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
LD ++ +F + + D + NS+I + L F + + PD+FT S+V
Sbjct: 283 CNRLDDSVKLFRQLEKWDSVLCNSMIGSYSWHCCGEDTLTLFIVAMRQSISPDKFTFSSV 342
Query: 255 IAA 247
+++
Sbjct: 343 LSS 345
>ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutrema salsugineum]
gi|557090330|gb|ESQ31038.1| hypothetical protein
EUTSA_v10011320mg [Eutrema salsugineum]
Length = 624
Score = 228 bits (581), Expect(2) = 7e-70
Identities = 121/248 (48%), Positives = 164/248 (66%)
Frame = -1
Query: 969 TFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFD 790
+ Y + +D L + P A+ +HAQL+K+G NT+ GNRC+ +Y K DA +FD
Sbjct: 4 SLYFSRVDRSLLSKCPT-LARIVHAQLVKVGLIPNTYWGNRCLQLYFKSGAVIDAFRLFD 62
Query: 789 EIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVV 610
+I ++N +WNICLK L++ G I +A +FDEMPERDVVS+N+MISG SCG E A +
Sbjct: 63 DILDKNTITWNICLKGLLRNGYINHALDVFDEMPERDVVSFNTMISGLGSCGLMENAIRI 122
Query: 609 FLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAG 430
LEM++ + P+ FTFS L S V C G+Q+H VI +G SNL+V NSL+DMY + G
Sbjct: 123 HLEMQRCMIGPTEFTFSILASLVSCVRHGEQIHGNVICSGLSLSNLVVWNSLMDMYRRLG 182
Query: 429 VLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIA 250
V+DYA+ VF M + D+ISWNSLIS +G + ALD FCLMR G PD +TVS V++
Sbjct: 183 VIDYALSVFSIMEDRDVISWNSLISCCSDYGKKEVALDLFCLMREMGNQPDAYTVSTVLS 242
Query: 249 ACSNLCNL 226
CS L +L
Sbjct: 243 VCSGLRDL 250
Score = 64.3 bits (155), Expect(2) = 7e-70
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F DS LCNS++ SY+ HG E A F+L +R+++RP +FT S++L
Sbjct: 283 NRLEDSVKLFRELEKWDSVLCNSLVGSYSWHGFGEDALRLFILAMRQSVRPDKFTFSSVL 342
Query: 43 NCASAFIIVAQGSQ 2
+ + +++ QG+Q
Sbjct: 343 SSMNV-VMLDQGAQ 355
Score = 97.1 bits (240), Expect = 1e-17
Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K A IK+GF +NT + IDM+SK N D++
Sbjct: 254 KKAIALCIKMGFLSNTIVSGAAIDMFSKCNRLEDSV------------------------ 289
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
+LF E+ + D V NS++ Y G E A +F+ + VRP FTFS+++
Sbjct: 290 -------KLFRELEKWDSVLCNSLVGSYSWHGFGEDALRLFILAMRQSVRPDKFTFSSVL 342
Query: 549 SSVKCAFI--GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLI 376
SS+ + G Q+H I+ G + + V SL++MY K G++D A+G+F + E DL
Sbjct: 343 SSMNVVMLDQGAQVHSLAIKLGFE-QDTAVATSLMEMYFKTGLVDSAMGMFATTDEKDLF 401
Query: 375 SWNSLISGFCKWGL--ENFALDHFCLMRYEGYVPDEFTVSAVIAAC 244
WN++I G + L E+ A+ H L+ PD T+ V+ AC
Sbjct: 402 FWNTVIMGLARNNLAAESLAIFHQLLID-RALKPDRVTLMGVLVAC 446
Score = 87.8 bits (216), Expect = 7e-15
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Frame = -1
Query: 774 NIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMR 595
N+ WN + ++G I+ A +F M +RDV+SWNS+IS G E A +F MR
Sbjct: 167 NLVVWNSLMDMYRRLGVIDYALSVFSIMEDRDVISWNSLISCCSDYGKKEVALDLFCLMR 226
Query: 594 KYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVL 424
+ G +P +T S ++S ++ GK+ I+ G SN IV + IDM+ K L
Sbjct: 227 EMGNQPDAYTVSTVLSVCSGLRDLCKGKKAIALCIKMGF-LSNTIVSGAAIDMFSKCNRL 285
Query: 423 DYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAA 247
+ ++ +F + + D + NSL+ + G AL F L + PD+FT S+V+++
Sbjct: 286 EDSVKLFRELEKWDSVLCNSLVGSYSWHGFGEDALRLFILAMRQSVRPDKFTFSSVLSS 344
>sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g43980,
mitochondrial; Flags: Precursor
gi|8778677|gb|AAF79685.1|AC022314_26 F9C16.15
[Arabidopsis thaliana]
Length = 633
Score = 227 bits (579), Expect(2) = 6e-68
Identities = 123/266 (46%), Positives = 168/266 (63%)
Frame = -1
Query: 1023 MHPLLTRVHIHRELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRC 844
M LL R H +P S ++S L++ L + P AK +HAQL++ GF T+ GNRC
Sbjct: 1 MFQLLRRAH-GLCMPSSL-YFSRLVNRSLLSKSPT-LAKIVHAQLLEAGFVRTTYWGNRC 57
Query: 843 IDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWN 664
+ +Y K +AL +FD+I ++N +WN+CLK L K G + NA LFDEMPERDVVSWN
Sbjct: 58 LQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWN 117
Query: 663 SMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGAD 484
+MISG +SCG E VF +M+++ +RP+ FTFS L S V C G+Q+H I +G
Sbjct: 118 TMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVS 177
Query: 483 YSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCL 304
NL+V NS++DMY + GV DYA+ VF +M + D++SWN LI G + ALD F L
Sbjct: 178 RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWL 237
Query: 303 MRYEGYVPDEFTVSAVIAACSNLCNL 226
MR PDE+TVS V++ CS+L L
Sbjct: 238 MREMEIQPDEYTVSMVVSICSDLREL 263
Score = 58.5 bits (140), Expect(2) = 6e-68
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N L+DSV +F DS LCNSMI SY+ H E A F+L + +++RP +FT S++L
Sbjct: 296 NRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL 355
Query: 43 NCASAFII 20
+ +A ++
Sbjct: 356 SSMNAVML 363
Score = 90.1 bits (222), Expect = 1e-15
Identities = 72/242 (29%), Positives = 112/242 (46%), Gaps = 4/242 (1%)
Frame = -1
Query: 957 NLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGE 778
+++ I S + + K A IK+GF +N+ + IDM+SK N D++
Sbjct: 251 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSV-------- 302
Query: 777 RNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEM 598
+LF E+ + D V NSMI Y E A +F+
Sbjct: 303 -----------------------KLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILA 339
Query: 597 RKYGVRPSVFTFSNLISSVKCAFI--GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVL 424
VRP FTFS+++SS+ + G +H VI+ G D + V SL++MY K G +
Sbjct: 340 MTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDL-DTAVATSLMEMYFKTGSV 398
Query: 423 DYAIGVFWSMMEVDLISWNSLISGFCK--WGLENFALDHFCLMRYEGYVPDEFTVSAVIA 250
D A+GVF DLI WN++I G + +E+ A+ + LM + PD T+ ++
Sbjct: 399 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMN-QSLKPDRVTLMGILV 457
Query: 249 AC 244
AC
Sbjct: 458 AC 459
Score = 75.9 bits (185), Expect = 3e-11
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Frame = -1
Query: 786 IGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVF 607
+ N+ WN + ++G + A +F M +RDVVSWN +I G E A F
Sbjct: 176 VSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQF 235
Query: 606 LEMRKYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
MR+ ++P +T S ++S ++ GKQ I+ G SN IV + IDM+ K
Sbjct: 236 WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF-LSNSIVLGAGIDMFSK 294
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
LD ++ +F + + D + NS+I + AL F L + PD+FT S+V
Sbjct: 295 CNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSV 354
Query: 255 IAA 247
+++
Sbjct: 355 LSS 357
>ref|NP_175064.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332193889|gb|AEE32010.1| pentatricopeptide
repeat-containing protein-like protein [Arabidopsis
thaliana]
Length = 621
Score = 226 bits (577), Expect(2) = 1e-67
Identities = 117/250 (46%), Positives = 161/250 (64%)
Frame = -1
Query: 975 SFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 796
S ++S L++ L + P AK +HAQL++ GF T+ GNRC+ +Y K +AL +
Sbjct: 3 SSLYFSRLVNRSLLSKSPT-LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 795 FDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAW 616
FD+I ++N +WN+CLK L K G + NA LFDEMPERDVVSWN+MISG +SCG E
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 615 VVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
VF +M+++ +RP+ FTFS L S V C G+Q+H I +G NL+V NS++DMY +
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRR 181
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
GV DYA+ VF +M + D++SWN LI G + ALD F LMR PDE+TVS V
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMV 241
Query: 255 IAACSNLCNL 226
++ CS+L L
Sbjct: 242 VSICSDLREL 251
Score = 58.5 bits (140), Expect(2) = 1e-67
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N L+DSV +F DS LCNSMI SY+ H E A F+L + +++RP +FT S++L
Sbjct: 284 NRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL 343
Query: 43 NCASAFII 20
+ +A ++
Sbjct: 344 SSMNAVML 351
Score = 90.1 bits (222), Expect = 1e-15
Identities = 72/242 (29%), Positives = 112/242 (46%), Gaps = 4/242 (1%)
Frame = -1
Query: 957 NLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGE 778
+++ I S + + K A IK+GF +N+ + IDM+SK N D++
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSV-------- 290
Query: 777 RNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEM 598
+LF E+ + D V NSMI Y E A +F+
Sbjct: 291 -----------------------KLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILA 327
Query: 597 RKYGVRPSVFTFSNLISSVKCAFI--GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVL 424
VRP FTFS+++SS+ + G +H VI+ G D + V SL++MY K G +
Sbjct: 328 MTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDL-DTAVATSLMEMYFKTGSV 386
Query: 423 DYAIGVFWSMMEVDLISWNSLISGFCK--WGLENFALDHFCLMRYEGYVPDEFTVSAVIA 250
D A+GVF DLI WN++I G + +E+ A+ + LM + PD T+ ++
Sbjct: 387 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMN-QSLKPDRVTLMGILV 445
Query: 249 AC 244
AC
Sbjct: 446 AC 447
Score = 75.9 bits (185), Expect = 3e-11
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Frame = -1
Query: 786 IGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVF 607
+ N+ WN + ++G + A +F M +RDVVSWN +I G E A F
Sbjct: 164 VSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQF 223
Query: 606 LEMRKYGVRPSVFTFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
MR+ ++P +T S ++S ++ GKQ I+ G SN IV + IDM+ K
Sbjct: 224 WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF-LSNSIVLGAGIDMFSK 282
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
LD ++ +F + + D + NS+I + AL F L + PD+FT S+V
Sbjct: 283 CNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSV 342
Query: 255 IAA 247
+++
Sbjct: 343 LSS 345
>ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Capsella rubella]
gi|482572418|gb|EOA36605.1| hypothetical protein
CARUB_v10011813mg [Capsella rubella]
Length = 621
Score = 223 bits (569), Expect(2) = 1e-67
Identities = 118/250 (47%), Positives = 161/250 (64%)
Frame = -1
Query: 975 SFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNV 796
S +++S L+D L + P ++ +HAQ++K+GF NT+ GNRC+ +Y K DAL +
Sbjct: 3 SSSYFSRLVDRSLLSKSPT-LSRIVHAQIVKVGFIPNTYWGNRCLQLYFKSGSVVDALQL 61
Query: 795 FDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAW 616
FD+I ++N SWN+CLK L+K G A ++FDEMPERDVVSWN++ISG CG E
Sbjct: 62 FDDIPDKNTISWNVCLKGLLKNGYFNYALEVFDEMPERDVVSWNTVISGLDFCGFPEYGM 121
Query: 615 VVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGK 436
VFL+M+ VRPS FTFS L S V C G+Q+H I +G SNL+V NS++DMY +
Sbjct: 122 RVFLDMKSLVVRPSEFTFSILASLVSCVGHGEQIHGNAICSGVSKSNLVVWNSVMDMYRR 181
Query: 435 AGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAV 256
G +YA+ VF +M E D+ISWN LI G + ALD LM G PDE+TVS V
Sbjct: 182 LGFFEYALSVFLTMEERDVISWNCLILCCSDSGNKEVALDQVGLMMEMGNGPDEYTVSTV 241
Query: 255 IAACSNLCNL 226
++ CS+L +L
Sbjct: 242 LSICSDLRDL 251
Score = 61.6 bits (148), Expect(2) = 1e-67
Identities = 31/72 (43%), Positives = 47/72 (65%)
Frame = -3
Query: 217 LEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLLNC 38
L+DSV +F DS LCNSMI SY+ HG E A F++ +R+ IRP +FT S++L+
Sbjct: 286 LDDSVKLFRELEKWDSVLCNSMIGSYSWHGFGEDALRLFIVAMRQRIRPDKFTFSSVLSS 345
Query: 37 ASAFIIVAQGSQ 2
+A +++ G+Q
Sbjct: 346 MNA-VMLDHGAQ 356
Score = 87.4 bits (215), Expect = 9e-15
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 4/226 (1%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K A IK+GF N+ + IDM+SK D++
Sbjct: 255 KQAIALCIKMGFFGNSVVLGAAIDMFSKCKRLDDSV------------------------ 290
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
+LF E+ + D V NSMI Y G E A +F+ + +RP FTFS+++
Sbjct: 291 -------KLFRELEKWDSVLCNSMIGSYSWHGFGEDALRLFIVAMRQRIRPDKFTFSSVL 343
Query: 549 SSVKCAFI--GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLI 376
SS+ + G Q+H VI+ G D + V SL++MY K G++D A+ VF + DLI
Sbjct: 344 SSMNAVMLDHGAQVHSLVIKLGCD-QDTAVATSLMEMYFKTGLVDSAMRVFPTTDAKDLI 402
Query: 375 SWNSLISGFCK--WGLENFALDHFCLMRYEGYVPDEFTVSAVIAAC 244
WN++I G + E+ A+ + LM PD T+ ++ AC
Sbjct: 403 FWNTVIMGLARNIRAAESLAVFNQLLMN-RVLKPDRVTLLGILVAC 447
Score = 74.3 bits (181), Expect = 8e-11
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Frame = -1
Query: 927 KPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICL 748
+P+ F SI A L+ + GN SK NL WN +
Sbjct: 133 RPSEFTFSILASLVSCVGHGEQIHGNAICSGVSKSNLV----------------VWNSVM 176
Query: 747 KTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVF 568
++G E A +F M ERDV+SWN +I G E A M + G P +
Sbjct: 177 DMYRRLGFFEYALSVFLTMEERDVISWNCLILCCSDSGNKEVALDQVGLMMEMGNGPDEY 236
Query: 567 TFSNLIS---SVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWS 397
T S ++S ++ GKQ I+ G + N +V + IDM+ K LD ++ +F
Sbjct: 237 TVSTVLSICSDLRDLCKGKQAIALCIKMGF-FGNSVVLGAAIDMFSKCKRLDDSVKLFRE 295
Query: 396 MMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAA 247
+ + D + NS+I + G AL F + + PD+FT S+V+++
Sbjct: 296 LEKWDSVLCNSMIGSYSWHGFGEDALRLFIVAMRQRIRPDKFTFSSVLSS 345
>ref|XP_002520264.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540483|gb|EEF42050.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 524
Score = 187 bits (476), Expect(2) = 6e-63
Identities = 95/157 (60%), Positives = 116/157 (73%)
Frame = -1
Query: 693 MPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQL 514
MPERDVVSWNSMISG+ S G + A +F EM+ GVRPS FT+S ++S V A GK+L
Sbjct: 1 MPERDVVSWNSMISGFASYGYFDSALGIFGEMQNMGVRPSAFTYSIMVSIVFDALHGKEL 60
Query: 513 HCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGL 334
H +IR+G + N+++GNSLIDMYGK G +DYA GVF++M EVD+I+WNSLI G CK G
Sbjct: 61 HGSMIRSGFNTLNVVLGNSLIDMYGKFGCVDYAFGVFFTMEEVDVITWNSLIIGCCKSGY 120
Query: 333 ENFALDHFCLMRYEGYVPDEFTVSAVIAACSNLCNLE 223
AL FCLMR GY PDEFT SAVI +CSNL NL+
Sbjct: 121 GELALHQFCLMRSSGYSPDEFTCSAVITSCSNLRNLD 157
Score = 81.6 bits (200), Expect(2) = 6e-63
Identities = 42/66 (63%), Positives = 49/66 (74%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LEDSV +F+ L+SALCNSMISSYA HG E A FVL LRENIRPTEFT+S++L
Sbjct: 189 NRLEDSVQLFEELDQLNSALCNSMISSYAGHGFGENALQLFVLALRENIRPTEFTISSVL 248
Query: 43 NCASAF 26
+ S F
Sbjct: 249 SFISIF 254
Score = 111 bits (278), Expect = 5e-22
Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 2/225 (0%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K I A +K+GF +NT + + ID++SK N D++
Sbjct: 160 KQIFAFCLKVGFLSNTIVSSAAIDLFSKCNRLEDSV------------------------ 195
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
QLF+E+ + + NSMIS Y G E A +F+ + +RP+ FT S+++
Sbjct: 196 -------QLFEELDQLNSALCNSMISSYAGHGFGENALQLFVLALRENIRPTEFTISSVL 248
Query: 549 S--SVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLI 376
S S+ G Q H V++ G + + IV +SL+ MY K G +DYA+ +F SM DLI
Sbjct: 249 SFISIFPPEQGTQFHSSVVKLGFEL-DAIVASSLVQMYTKFGFIDYAMDIFKSMTVRDLI 307
Query: 375 SWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACS 241
SWN++I G + G ALD F + G PD T++ V+ ACS
Sbjct: 308 SWNTMIMGLTQNGRVIEALDAFKKLLNRGPPPDRITLAGVLLACS 352
Score = 94.0 bits (232), Expect = 1e-16
Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 6/253 (2%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNT-NTFLGNRCIDMYSKVNLFHDA 805
P +FT YS ++ + A K +H +I+ GFNT N LGN IDMY K
Sbjct: 39 PSAFT-YSIMVSIVFD----ALHGKELHGSMIRSGFNTLNVVLGNSLIDMYGKF------ 87
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
G ++ A +F M E DV++WNS+I G G E
Sbjct: 88 -------------------------GCVDYAFGVFFTMEEVDVITWNSLIIGCCKSGYGE 122
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFI-----GKQLHCCVIRNGADYSNLIVGN 460
A F MR G P FT S +I+S C+ + GKQ+ ++ G SN IV +
Sbjct: 123 LALHQFCLMRSSGYSPDEFTCSAVITS--CSNLRNLDKGKQIFAFCLKVGF-LSNTIVSS 179
Query: 459 SLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVP 280
+ ID++ K L+ ++ +F + +++ NS+IS + G AL F L E P
Sbjct: 180 AAIDLFSKCNRLEDSVQLFEELDQLNSALCNSMISSYAGHGFGENALQLFVLALRENIRP 239
Query: 279 DEFTVSAVIAACS 241
EFT+S+V++ S
Sbjct: 240 TEFTISSVLSFIS 252
>ref|XP_004237750.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Solanum lycopersicum]
Length = 527
Score = 187 bits (474), Expect(2) = 2e-61
Identities = 96/157 (61%), Positives = 119/157 (75%)
Frame = -1
Query: 693 MPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQL 514
MP+RDVVSWNSMISGY G E A VFLEM+KYG+ PS +T+S L+S V+ AF GK++
Sbjct: 1 MPDRDVVSWNSMISGY---GLFENALGVFLEMQKYGITPSGYTYSILVSYVEFAFHGKEI 57
Query: 513 HCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGL 334
H ++RNG D SN++VGNSLIDMYGK G++DYA VF +M VD+ISWNSLIS CK G
Sbjct: 58 HGNMLRNGVDLSNVVVGNSLIDMYGKLGLVDYATAVFLAMETVDVISWNSLISSCCKSGY 117
Query: 333 ENFALDHFCLMRYEGYVPDEFTVSAVIAACSNLCNLE 223
E+ AL +F LMR Y PDEFT+S+V+ CSNL +LE
Sbjct: 118 EDTALSYFSLMRACRYSPDEFTMSSVLIGCSNLRSLE 154
Score = 77.4 bits (189), Expect(2) = 2e-61
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N +EDS IF S D ALCNSMISSY + EE A FVL LR+NIRPTEFTLS +L
Sbjct: 186 NSIEDSARIFKYSNSWDIALCNSMISSYTLNNFEENALRLFVLTLRKNIRPTEFTLSCIL 245
Query: 43 NCASAF 26
+C + F
Sbjct: 246 SCTTTF 251
Score = 93.2 bits (230), Expect = 2e-16
Identities = 78/252 (30%), Positives = 111/252 (44%), Gaps = 2/252 (0%)
Frame = -1
Query: 990 RELPCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFH 811
R P FT S LI S + K I IK+GF NT + + ID++S N
Sbjct: 132 RYSPDEFTMSSVLIG--CSNLRSLEKGKQILCLCIKMGFLRNTIVSSAAIDLFSTCNSIE 189
Query: 810 DALNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGT 631
D+ +F SW+I L NSMIS Y
Sbjct: 190 DSARIFKYSN-----SWDIAL--------------------------CNSMISSYTLNNF 218
Query: 630 SEKAWVVFLEMRKYGVRPSVFTFSNLISSVKC--AFIGKQLHCCVIRNGADYSNLIVGNS 457
E A +F+ + +RP+ FT S ++S +G Q H VI+ G S+ +V S
Sbjct: 219 EENALRLFVLTLRKNIRPTEFTLSCILSCTTTFPVDLGIQAHSLVIKLGF-VSDPVVSTS 277
Query: 456 LIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPD 277
L+DMY K G++D A F ++ DLISWN++I G G +L + + G PD
Sbjct: 278 LVDMYCKYGLIDSATNTFNDLLTRDLISWNTIIFGLAINGEPTKSLSLYYELLELGGQPD 337
Query: 276 EFTVSAVIAACS 241
T++AV+ ACS
Sbjct: 338 RITLTAVLLACS 349
Score = 78.2 bits (191), Expect = 6e-12
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Frame = -1
Query: 942 ILSFRKPANFAKSIHAQLIKLGFN-TNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIF 766
++S+ + A K IH +++ G + +N +GN IDMY K+ L
Sbjct: 44 LVSYVEFAFHGKEIHGNMLRNGVDLSNVVVGNSLIDMYGKLGL----------------- 86
Query: 765 SWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYG 586
++ A +F M DV+SWNS+IS G + A F MR
Sbjct: 87 --------------VDYATAVFLAMETVDVISWNSLISSCCKSGYEDTALSYFSLMRACR 132
Query: 585 VRPSVFTFSNLI---SSVKCAFIGKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYA 415
P FT S+++ S+++ GKQ+ C I+ G N IV ++ ID++ ++ +
Sbjct: 133 YSPDEFTMSSVLIGCSNLRSLEKGKQILCLCIKMGF-LRNTIVSSAAIDLFSTCNSIEDS 191
Query: 414 IGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIA 250
+F D+ NS+IS + E AL F L + P EFT+S +++
Sbjct: 192 ARIFKYSNSWDIALCNSMISSYTLNNFEENALRLFVLTLRKNIRPTEFTLSCILS 246
>ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 528
Score = 175 bits (443), Expect(2) = 7e-61
Identities = 90/156 (57%), Positives = 109/156 (69%)
Frame = -1
Query: 693 MPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFIGKQL 514
MPERDVVSWNSMISGY+SCG A +F EM+ GVRPS FTFS ++S V GK++
Sbjct: 1 MPERDVVSWNSMISGYVSCGLVGNAMWMFSEMQSSGVRPSEFTFSIVMSVVSSGCHGKEI 60
Query: 513 HCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGL 334
H +IR G + SN++VGNSLI MYGK G +DYA GVF M E+D+ISWNSLI G + G
Sbjct: 61 HGGMIRKGVNLSNVVVGNSLIHMYGKIGSVDYAFGVFMCMEELDVISWNSLIWGCHRAGY 120
Query: 333 ENFALDHFCLMRYEGYVPDEFTVSAVIAACSNLCNL 226
E A+D F LMR + PDEFT+S VI C NL +L
Sbjct: 121 EELAIDQFVLMRGTEHSPDEFTISTVINVCCNLLDL 156
Score = 87.4 bits (215), Expect(2) = 7e-61
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = -3
Query: 223 NGLEDSVHIFDTSAVLDSALCNSMISSYARHGSEEKAFHTFVLCLRENIRPTEFTLSTLL 44
N LED+V +F + DSA+CNSMISSYARHG + A FVL LR+N+RPTEFTLS++L
Sbjct: 189 NRLEDAVLLFQELSWSDSAVCNSMISSYARHGCVDNAVLLFVLTLRKNLRPTEFTLSSVL 248
Query: 43 NCASAFIIVAQGSQ 2
+C S F+ V QG Q
Sbjct: 249 SCTSTFLPVEQGFQ 262
Score = 104 bits (259), Expect = 7e-20
Identities = 74/227 (32%), Positives = 117/227 (51%), Gaps = 4/227 (1%)
Frame = -1
Query: 909 KSIHAQLIKLGFNTNTFLGNRCIDMYSKVNLFHDALNVFDEIGERNIFSWNICLKTLVKV 730
K I A +K+GF +N+ + + IDM+SK N DA+ +F E+ SW+
Sbjct: 160 KQIIAFSLKVGFFSNSIVSSAAIDMFSKCNRLEDAVLLFQEL------SWS--------- 204
Query: 729 GDIENARQLFDEMPERDVVSWNSMISGYISCGTSEKAWVVFLEMRKYGVRPSVFTFSNLI 550
D NSMIS Y G + A ++F+ + +RP+ FT S+++
Sbjct: 205 ----------------DSAVCNSMISSYARHGCVDNAVLLFVLTLRKNLRPTEFTLSSVL 248
Query: 549 SSVKCAFI----GKQLHCCVIRNGADYSNLIVGNSLIDMYGKAGVLDYAIGVFWSMMEVD 382
S F+ G Q+H VI+ G + S+ IV +SL+D Y K G++++A+ +F SM D
Sbjct: 249 SCTS-TFLPVEQGFQIHSWVIKLGFE-SDAIVASSLVDFYTKLGLINHAMKIFSSMAVKD 306
Query: 381 LISWNSLISGFCKWGLENFALDHFCLMRYEGYVPDEFTVSAVIAACS 241
LISWN++I G + G LD F + EG D+ T++ V+ AC+
Sbjct: 307 LISWNTMIMGLAQNGKLFETLDTFKELVSEGMPADDVTLAGVLLACN 353
Score = 84.7 bits (208), Expect = 6e-14
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 5/258 (1%)
Frame = -1
Query: 981 PCSFTFYSNLIDEILSFRKPANFAKSIHAQLIKLGFN-TNTFLGNRCIDMYSKVNLFHDA 805
P FTF ++S K IH +I+ G N +N +GN I MY K+
Sbjct: 39 PSEFTF-----SIVMSVVSSGCHGKEIHGGMIRKGVNLSNVVVGNSLIHMYGKI------ 87
Query: 804 LNVFDEIGERNIFSWNICLKTLVKVGDIENARQLFDEMPERDVVSWNSMISGYISCGTSE 625
G ++ A +F M E DV+SWNS+I G G E
Sbjct: 88 -------------------------GSVDYAFGVFMCMEELDVISWNSLIWGCHRAGYEE 122
Query: 624 KAWVVFLEMRKYGVRPSVFTFSNLISSVKCAFI----GKQLHCCVIRNGADYSNLIVGNS 457
A F+ MR P FT S +I+ V C + GKQ+ ++ G +SN IV ++
Sbjct: 123 LAIDQFVLMRGTEHSPDEFTISTVIN-VCCNLLDLARGKQIIAFSLKVGF-FSNSIVSSA 180
Query: 456 LIDMYGKAGVLDYAIGVFWSMMEVDLISWNSLISGFCKWGLENFALDHFCLMRYEGYVPD 277
IDM+ K L+ A+ +F + D NS+IS + + G + A+ F L + P
Sbjct: 181 AIDMFSKCNRLEDAVLLFQELSWSDSAVCNSMISSYARHGCVDNAVLLFVLTLRKNLRPT 240
Query: 276 EFTVSAVIAACSNLCNLE 223
EFT+S+V++ S +E
Sbjct: 241 EFTLSSVLSCTSTFLPVE 258