BLASTX nr result
ID: Catharanthus23_contig00032210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032210
(450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU10741.1| putative polyprotein [Oryza sativa Japonica Group] 145 5e-33
emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group] 144 1e-32
gb|ABB47352.2| retrotransposon protein, putative, unclassified [... 143 2e-32
emb|CAD40020.2| OSJNBa0052O21.5 [Oryza sativa Japonica Group] 143 2e-32
gb|AAM08617.1|AC107314_8 Putative retroelement [Oryza sativa Jap... 143 2e-32
emb|CAE03745.1| OSJNBa0019D11.11 [Oryza sativa Japonica Group] 143 3e-32
emb|CAH67521.1| OSIGBa0131L05.2 [Oryza sativa Indica Group] 143 3e-32
gb|ABF95742.1| retrotransposon protein, putative, unclassified [... 143 3e-32
gb|ABF93933.1| retrotransposon protein, putative, unclassified [... 143 3e-32
gb|AAT85175.1| putative polyprotein [Oryza sativa Japonica Group] 143 3e-32
ref|XP_002459931.1| hypothetical protein SORBIDRAFT_02g017020 [S... 142 3e-32
gb|AAU44223.1| putative polyprotein [Oryza sativa Japonica Group] 142 3e-32
emb|CAE03902.2| OSJNBb0026I12.10 [Oryza sativa Japonica Group] 142 3e-32
emb|CAE02097.1| OSJNBa0020I02.4 [Oryza sativa Japonica Group] 142 3e-32
gb|ABA94658.1| retrotransposon protein, putative, unclassified [... 142 5e-32
gb|ABF98055.1| retrotransposon protein, putative, unclassified [... 142 5e-32
gb|ABF94078.1| retrotransposon protein, putative, unclassified [... 142 5e-32
emb|CAH67689.1| H0510A06.14 [Oryza sativa Indica Group] gi|11630... 142 5e-32
gb|AAS07175.1| putative reverse transcriptase [Oryza sativa Japo... 142 5e-32
gb|AAR88606.1| putative polyprotein [Oryza sativa Japonica Group] 142 5e-32
>gb|AAU10741.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1510
Score = 145 bits (366), Expect = 5e-33
Identities = 72/134 (53%), Positives = 97/134 (72%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q F+GC+
Sbjct: 804 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPKKIRAIERMRPPSKLRDVQCFTGCM 863
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 864 AALSRFISRLGEKALPLFKLLKHSGPFIWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 923
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 924 LYLAATPQVVSAAL 937
>emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group]
Length = 1989
Score = 144 bits (363), Expect = 1e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 1000 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCITGCM 1059
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++A ++LK L P+LVAL+ + L
Sbjct: 1060 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERALTQLKAYLSSPPVLVALEPNEPLL 1119
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1120 LYLAATPQVVSAAL 1133
>gb|ABB47352.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1772
Score = 143 bits (361), Expect = 2e-32
Identities = 72/140 (51%), Positives = 97/140 (69%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RS +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 850 RSTRIKLNPDKCVFGVPTGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 909
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 910 AALSRFISRLGEKALSLFKLLKRSGPFTWTEEAEQAFTQLKAYLSSPPVLVAPEPDEPLL 969
Query: 89 TYLAVTEIVVSAVICSSCNE 30
YLA T VVSA + NE
Sbjct: 970 LYLAATPQVVSAALVVERNE 989
>emb|CAD40020.2| OSJNBa0052O21.5 [Oryza sativa Japonica Group]
Length = 1888
Score = 143 bits (361), Expect = 2e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 931 RSARIKLNPNKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 990
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 991 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 1050
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1051 LYLAATPQVVSAAL 1064
>gb|AAM08617.1|AC107314_8 Putative retroelement [Oryza sativa Japonica Group]
Length = 1783
Score = 143 bits (361), Expect = 2e-32
Identities = 72/140 (51%), Positives = 97/140 (69%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RS +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 862 RSTRIKLNPDKCVFGVPTGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 921
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 922 AALSRFISRLGEKALSLFKLLKRSGPFTWTEEAEQAFTQLKAYLSSPPVLVAPEPDEPLL 981
Query: 89 TYLAVTEIVVSAVICSSCNE 30
YLA T VVSA + NE
Sbjct: 982 LYLAATPQVVSAALVVERNE 1001
>emb|CAE03745.1| OSJNBa0019D11.11 [Oryza sativa Japonica Group]
Length = 1770
Score = 143 bits (360), Expect = 3e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 925 RSAHIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 984
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 985 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 1044
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1045 LYLAATPQVVSAAL 1058
>emb|CAH67521.1| OSIGBa0131L05.2 [Oryza sativa Indica Group]
Length = 1770
Score = 143 bits (360), Expect = 3e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 925 RSAHIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 984
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 985 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 1044
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1045 LYLAATPQVVSAAL 1058
>gb|ABF95742.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1926
Score = 143 bits (360), Expect = 3e-32
Identities = 70/140 (50%), Positives = 97/140 (69%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FG+P+ K LGF++ IE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 905 RSARIKLNPDKCVFGIPAGKLLGFLVSARSIEANPEKIRAIERMRPPSKLRDVQCVTGCM 964
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++A ++LK L P+LVA + + L
Sbjct: 965 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERALTQLKAYLSSPPVLVAPEPNEPLL 1024
Query: 89 TYLAVTEIVVSAVICSSCNE 30
YLA T VVSA + C+E
Sbjct: 1025 LYLAATPQVVSAALVVECDE 1044
>gb|ABF93933.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 943
Score = 143 bits (360), Expect = 3e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 57 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 116
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 117 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 176
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 177 LYLAATPQVVSAAL 190
>gb|AAT85175.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1096
Score = 143 bits (360), Expect = 3e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 139 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 198
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LKV L P+LVA + + L
Sbjct: 199 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKVYLSSPPVLVAPEPDEPLL 258
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVS +
Sbjct: 259 LYLAATPQVVSTAL 272
>ref|XP_002459931.1| hypothetical protein SORBIDRAFT_02g017020 [Sorghum bicolor]
gi|241923308|gb|EER96452.1| hypothetical protein
SORBIDRAFT_02g017020 [Sorghum bicolor]
Length = 802
Score = 142 bits (359), Expect = 3e-32
Identities = 76/150 (50%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Frame = -2
Query: 434 KLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCVAYLSR 255
KLNPKKCIFGVPS LG ++ GI +P+K+KA+ +MR PKNVKDIQK SGC+A LSR
Sbjct: 63 KLNPKKCIFGVPSGLLLGNVVSRDGIRPNPSKVKAVLDMRPPKNVKDIQKLSGCMAALSR 122
Query: 254 FLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILFTYLAV 75
F+S++GEK L +KLLK S F+WTEE AF++LK L P+L A + L Y+A
Sbjct: 123 FISRLGEKGLPFFKLLKASKKFSWTEEADAAFTQLKTFLTSPPVLTAPQPNVDLLLYIAA 182
Query: 74 TEIVVSAVICSSCNE-----KI-LPIYYVS 3
T+ VVS I +E K+ P+Y++S
Sbjct: 183 TDRVVSTAIVVERDELGHVYKVQRPVYFIS 212
>gb|AAU44223.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1823
Score = 142 bits (359), Expect = 3e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 1000 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 1059
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 1060 AALSRFISRLGEKALPLFKLLKRSGPFIWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 1119
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1120 LYLAATPQVVSAAL 1133
>emb|CAE03902.2| OSJNBb0026I12.10 [Oryza sativa Japonica Group]
Length = 2009
Score = 142 bits (359), Expect = 3e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 992 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 1051
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++A ++LKV L P+LVA + + L
Sbjct: 1052 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERALTQLKVYLSSPPVLVAPEPNEPLL 1111
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1112 LYLAATPQVVSAAL 1125
>emb|CAE02097.1| OSJNBa0020I02.4 [Oryza sativa Japonica Group]
Length = 1615
Score = 142 bits (359), Expect = 3e-32
Identities = 70/134 (52%), Positives = 97/134 (72%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K L F++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 804 RSARIKLNPDKCVFGVPAGKLLRFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCL 863
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L +P+LVA + ++L
Sbjct: 864 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKAYLSSSPVLVAPEPDELLL 923
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 924 LYLAATPQVVSAAL 937
>gb|ABA94658.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1965
Score = 142 bits (358), Expect = 5e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 983 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 1042
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++A ++LKV L P+LVA + + L
Sbjct: 1043 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERALTQLKVYLSSPPVLVAPEPDEPLL 1102
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1103 LYLAATPQVVSAAL 1116
>gb|ABF98055.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1890
Score = 142 bits (358), Expect = 5e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 944 RSARIKLNPDKCMFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 1003
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 1004 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 1063
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1064 LYLAATPQVVSAAL 1077
>gb|ABF94078.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1729
Score = 142 bits (358), Expect = 5e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 940 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 999
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 1000 AALSRFISRLGEKALPLFKLLKCSGPFIWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 1059
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1060 LYLAATPQVVSAAL 1073
>emb|CAH67689.1| H0510A06.14 [Oryza sativa Indica Group] gi|116309934|emb|CAH66966.1|
H0525D09.6 [Oryza sativa Indica Group]
Length = 2027
Score = 142 bits (358), Expect = 5e-32
Identities = 72/140 (51%), Positives = 96/140 (68%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 1006 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 1065
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE + A ++LK L P+LVA + + L
Sbjct: 1066 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAENALAQLKAYLSSPPVLVAPEPNEPLL 1125
Query: 89 TYLAVTEIVVSAVICSSCNE 30
YLA T VVSA + NE
Sbjct: 1126 LYLAATPQVVSAALVVERNE 1145
>gb|AAS07175.1| putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108709517|gb|ABF97312.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 2002
Score = 142 bits (358), Expect = 5e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 1009 RSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 1068
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 1069 AALSRFISRLGEKALPLFKLLKCSGPFTWTEEAEQAFTQLKAYLSSPPVLVAPEPDEPLL 1128
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1129 LYLAATPQVVSAAL 1142
>gb|AAR88606.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1871
Score = 142 bits (358), Expect = 5e-32
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -2
Query: 449 RSAGMKLNPKKCIFGVPSIKYLGFIILELGIEVDPAKIKAIQEMRTPKNVKDIQKFSGCV 270
RSA +KLNP KC+FGVP+ K LGF++ GIE +P KI+AI+ MR P ++D+Q +GC+
Sbjct: 944 RSARIKLNPDKCMFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCM 1003
Query: 269 AYLSRFLSKMGEKNLLLYKLLKGSSHFAWTEERKKAFSELKVALGQAPILVALKEGKILF 90
A LSRF+S++GEK L L+KLLK S F WTEE ++AF++LK L P+LVA + + L
Sbjct: 1004 AALSRFISRLGEKALPLFKLLKRSGPFTWTEEAERAFTQLKAYLSSPPVLVAPEPDEPLL 1063
Query: 89 TYLAVTEIVVSAVI 48
YLA T VVSA +
Sbjct: 1064 LYLAATPQVVSAAL 1077