BLASTX nr result
ID: Catharanthus23_contig00032169
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032169
(209 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 64 5e-15
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom... 59 7e-13
gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobrom... 59 7e-13
gb|EOY21657.1| DNA/RNA polymerases superfamily protein [Theobrom... 59 7e-13
gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobrom... 59 7e-13
gb|EOY19088.1| Uncharacterized protein TCM_043787 [Theobroma cacao] 59 7e-13
gb|EOX94092.1| Gag protease polyprotein [Theobroma cacao] 59 8e-13
gb|EOY13858.1| Uncharacterized protein TCM_032543 [Theobroma cacao] 59 8e-13
gb|EMJ25340.1| hypothetical protein PRUPE_ppa016115mg [Prunus pe... 57 1e-12
gb|EOY18962.1| Uncharacterized protein TCM_043494 [Theobroma cacao] 58 2e-12
gb|EOY03692.1| Gag protease polyprotein [Theobroma cacao] 59 2e-12
gb|EOY31823.1| Uncharacterized protein TCM_039092 [Theobroma cacao] 57 2e-12
gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus pe... 57 3e-12
gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe... 57 3e-12
gb|EMJ22433.1| hypothetical protein PRUPE_ppb019121mg [Prunus pe... 57 3e-12
gb|EOY21616.1| Uncharacterized protein TCM_013563 [Theobroma cacao] 57 3e-12
gb|AAC26240.1| contains similarity to reverse transcriptases (PF... 53 5e-12
emb|CBL94172.1| putative retrotransposon protein [Malus domestica] 59 6e-12
gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative... 56 6e-12
gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobrom... 56 6e-12
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 63.9 bits (154), Expect(2) = 5e-15
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEVGVRSH 29
+SYH+S+GM PFEALYGR+CRTPLYWDEVG + +
Sbjct: 926 NSYHASLGMPPFEALYGRKCRTPLYWDEVGEKQY 959
Score = 42.4 bits (98), Expect(2) = 5e-15
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKWVDSLA 124
SERTIQTLE+MLRAC L+ G W D L+
Sbjct: 891 SERTIQTLEDMLRACVLEVGGSWDDFLS 918
>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1537
Score = 59.3 bits (142), Expect(2) = 7e-13
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 1296 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 1337
Score = 39.7 bits (91), Expect(2) = 7e-13
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 1271 SERTIQTLEDMLRACVIDFIGSW 1293
>gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1336
Score = 59.3 bits (142), Expect(2) = 7e-13
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 1201 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 1242
Score = 39.7 bits (91), Expect(2) = 7e-13
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 1176 SERTIQTLEDMLRACVIDFIGSW 1198
>gb|EOY21657.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1188
Score = 59.3 bits (142), Expect(2) = 7e-13
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 1104 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 1145
Score = 39.7 bits (91), Expect(2) = 7e-13
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 1079 SERTIQTLEDMLRACVIDFIGSW 1101
>gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 811
Score = 59.3 bits (142), Expect(2) = 7e-13
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 697 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 738
Score = 39.7 bits (91), Expect(2) = 7e-13
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 672 SERTIQTLEDMLRACVIDFIGSW 694
>gb|EOY19088.1| Uncharacterized protein TCM_043787 [Theobroma cacao]
Length = 649
Score = 59.3 bits (142), Expect(2) = 7e-13
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 549 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 590
Score = 39.7 bits (91), Expect(2) = 7e-13
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 524 SERTIQTLEDMLRACVIDFIGSW 546
>gb|EOX94092.1| Gag protease polyprotein [Theobroma cacao]
Length = 269
Score = 59.3 bits (142), Expect(2) = 8e-13
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 196 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 237
Score = 39.7 bits (91), Expect(2) = 8e-13
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 171 SERTIQTLEDMLRACVIDFIGSW 193
>gb|EOY13858.1| Uncharacterized protein TCM_032543 [Theobroma cacao]
Length = 189
Score = 59.3 bits (142), Expect(2) = 8e-13
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 123 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 164
Score = 39.7 bits (91), Expect(2) = 8e-13
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 98 SERTIQTLEDMLRACVIDFIGSW 120
>gb|EMJ25340.1| hypothetical protein PRUPE_ppa016115mg [Prunus persica]
Length = 1269
Score = 56.6 bits (135), Expect(2) = 1e-12
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEVG 41
+SY SIGM+PF ALYGR+CRTP YWDEVG
Sbjct: 1056 NSYQVSIGMSPFNALYGRQCRTPFYWDEVG 1085
Score = 41.6 bits (96), Expect(2) = 1e-12
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKWVDSL 127
SERTIQTLENMLRAC L F W + L
Sbjct: 1021 SERTIQTLENMLRACALQFRGDWDEKL 1047
>gb|EOY18962.1| Uncharacterized protein TCM_043494 [Theobroma cacao]
Length = 238
Score = 58.2 bits (139), Expect(2) = 2e-12
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +++ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 43 HLPLVE-FAYNNNFQSSIGMAPYEALYGRKCRTPLCWDEVGER 84
Score = 39.7 bits (91), Expect(2) = 2e-12
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 18 SERTIQTLEDMLRACVIDFIGSW 40
>gb|EOY03692.1| Gag protease polyprotein [Theobroma cacao]
Length = 689
Score = 59.3 bits (142), Expect(2) = 2e-12
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALYGR+CRTPL WDEVG R
Sbjct: 605 HLPLVE-FAYNNSFQSSIGMAPYEALYGRKCRTPLCWDEVGER 646
Score = 38.1 bits (87), Expect(2) = 2e-12
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTL++MLRAC +DF W
Sbjct: 580 SERTIQTLKDMLRACVIDFIGSW 602
>gb|EOY31823.1| Uncharacterized protein TCM_039092 [Theobroma cacao]
Length = 433
Score = 57.0 bits (136), Expect(2) = 2e-12
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E V +S+ SSIG+A ++ALYGR+CRTPLYWDEVG R
Sbjct: 297 HLPLVEFV-YNNSFQSSIGVAAYKALYGRKCRTPLYWDEVGER 338
Score = 40.4 bits (93), Expect(2) = 2e-12
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 272 SERTIQTLEDMLRACVIDFTGSW 294
>gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus persica]
Length = 1506
Score = 57.4 bits (137), Expect(2) = 3e-12
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEVG 41
+SY SIGM+PF+ALYGR+CRTP YWDEVG
Sbjct: 1293 NSYQVSIGMSPFDALYGRQCRTPFYWDEVG 1322
Score = 39.7 bits (91), Expect(2) = 3e-12
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKWVDSL 127
SERTIQTLE+MLRAC L F W + L
Sbjct: 1258 SERTIQTLEDMLRACALQFQGDWDEKL 1284
>gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 57.4 bits (137), Expect(2) = 3e-12
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEVG 41
+SY SIGM+PF+ALYGR+CRTP YWDEVG
Sbjct: 981 NSYQVSIGMSPFDALYGRQCRTPFYWDEVG 1010
Score = 39.7 bits (91), Expect(2) = 3e-12
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKWVDSL 127
SERTIQTLE+MLRAC L F W + L
Sbjct: 946 SERTIQTLEHMLRACALQFRGDWDEKL 972
>gb|EMJ22433.1| hypothetical protein PRUPE_ppb019121mg [Prunus persica]
Length = 552
Score = 57.4 bits (137), Expect(2) = 3e-12
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEVG 41
+SY SIGM+PF+ALYGR+CRTP YWDEVG
Sbjct: 339 NSYQVSIGMSPFDALYGRQCRTPFYWDEVG 368
Score = 39.7 bits (91), Expect(2) = 3e-12
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKWVDSL 127
SERTIQTLE+MLRAC L F W + L
Sbjct: 304 SERTIQTLEDMLRACALQFRGDWDEKL 330
>gb|EOY21616.1| Uncharacterized protein TCM_013563 [Theobroma cacao]
Length = 296
Score = 57.4 bits (137), Expect(2) = 3e-12
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEV 44
+S+ SSIGMAP+EALYGR+CRTPLYWD+V
Sbjct: 105 NSFQSSIGMAPYEALYGRKCRTPLYWDKV 133
Score = 39.7 bits (91), Expect(2) = 3e-12
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 70 SERTIQTLEDMLRACVIDFIGSW 92
>gb|AAC26240.1| contains similarity to reverse transcriptases (PFam: rvt.hmm, score:
116.22) [Arabidopsis thaliana]
Length = 1322
Score = 52.8 bits (125), Expect(2) = 5e-12
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEVGVRS 32
+SY SIGM PFE LYGR CRTPL W +VG RS
Sbjct: 1104 NSYQMSIGMTPFETLYGRPCRTPLCWTQVGERS 1136
Score = 43.5 bits (101), Expect(2) = 5e-12
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKWVD 133
SERTIQTLE+MLR C LD+G +W D
Sbjct: 1069 SERTIQTLEDMLRMCVLDWGGRWAD 1093
>emb|CBL94172.1| putative retrotransposon protein [Malus domestica]
Length = 1353
Score = 58.5 bits (140), Expect(2) = 6e-12
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2
Query: 130 SSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
+S+HSSIGM+PFEALYGR CRTPL W EVG R
Sbjct: 1211 NSFHSSIGMSPFEALYGRACRTPLCWSEVGER 1242
Score = 37.4 bits (85), Expect(2) = 6e-12
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLR+ L FG+ W
Sbjct: 1176 SERTIQTLEDMLRSSVLQFGDSW 1198
>gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
Length = 1347
Score = 56.2 bits (134), Expect(2) = 6e-12
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMAP+EALY R+CRTPL WDEVG R
Sbjct: 1107 HLPLVE-FAYNNSFQSSIGMAPYEALYERKCRTPLCWDEVGER 1148
Score = 39.7 bits (91), Expect(2) = 6e-12
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 1082 SERTIQTLEDMLRACVIDFIGSW 1104
>gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1290
Score = 56.2 bits (134), Expect(2) = 6e-12
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -2
Query: 163 HLGLWE*VGRQSSYHSSIGMAPFEALYGRRCRTPLYWDEVGVR 35
HL L E +S+ SSIGMA +EALYGR+CRTPL WDEVG R
Sbjct: 1085 HLPLVE-FAYNNSFQSSIGMATYEALYGRKCRTPLCWDEVGER 1126
Score = 39.7 bits (91), Expect(2) = 6e-12
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 207 SERTIQTLENMLRACTLDFGNKW 139
SERTIQTLE+MLRAC +DF W
Sbjct: 1060 SERTIQTLEDMLRACVIDFIRSW 1082