BLASTX nr result
ID: Catharanthus23_contig00032132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032132
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula] ... 132 5e-29
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 131 1e-28
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 130 2e-28
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 128 9e-28
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 128 9e-28
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 127 2e-27
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 127 2e-27
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 125 4e-27
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 125 4e-27
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 125 4e-27
emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera] 123 2e-26
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 122 5e-26
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 121 1e-25
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 120 1e-25
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 120 2e-25
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 120 2e-25
emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera] 119 4e-25
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 119 4e-25
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 117 2e-24
gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsi... 117 2e-24
>ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula]
gi|355491466|gb|AES72669.1| Stomatin-like protein
[Medicago truncatula]
Length = 605
Score = 132 bits (332), Expect = 5e-29
Identities = 60/90 (66%), Positives = 72/90 (80%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E+GLLGAKP TP+E NH L+ A G +NP+RYRRL+G+LIYL TRPEL+Y VH L+Q
Sbjct: 351 EVGLLGAKPMPTPLEQNHNLSLAQGEFLENPERYRRLVGRLIYLCFTRPELSYSVHILSQ 410
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM PR HW AA+RVVRYLKG+PG+GIFL
Sbjct: 411 FMQQPREDHWTAALRVVRYLKGNPGQGIFL 440
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 131 bits (329), Expect = 1e-28
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGAKP P+E NH+L A+G L NP+ YRRL+G+LIYL +TRP+LAY VH L+Q
Sbjct: 844 EAGLLGAKPCGFPIEQNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQ 903
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FMH PR HW+AA+RVVRYLKG+PG+GI L
Sbjct: 904 FMHEPRIEHWEAALRVVRYLKGTPGQGILL 933
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 130 bits (327), Expect = 2e-28
Identities = 59/90 (65%), Positives = 74/90 (82%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLG KPAS P++ NH+LA A+G D+P RYRRL+G++IYL TRPEL+YV+H L+Q
Sbjct: 1231 ETGLLGVKPASFPLDQNHKLAFATGETIDDPLRYRRLVGRIIYLATTRPELSYVIHILSQ 1290
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FMH P+ AHW+AA+RVVRYLK SPG+GI L
Sbjct: 1291 FMHNPKPAHWEAALRVVRYLKSSPGQGILL 1320
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 128 bits (321), Expect = 9e-28
Identities = 56/90 (62%), Positives = 74/90 (82%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLG KP++ P+ NH+LA +G +F NP++YRRL+G+ IYLT+TRP+L+Y VH L+Q
Sbjct: 1241 ETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQ 1300
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM AP AHW+AA+R+VRYLKGSP +GIFL
Sbjct: 1301 FMQAPLVAHWEAALRLVRYLKGSPAQGIFL 1330
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 128 bits (321), Expect = 9e-28
Identities = 56/90 (62%), Positives = 74/90 (82%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLG KP++ P+ NH+LA +G +F NP++YRRL+G+ IYLT+TRP+L+Y VH L+Q
Sbjct: 521 ETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQ 580
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM AP AHW+AA+R+VRYLKGSP +GIFL
Sbjct: 581 FMQAPLVAHWEAALRLVRYLKGSPAQGIFL 610
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 127 bits (319), Expect = 2e-27
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGAKP P+E NH+L A+G L NP+ YRRL+G+LIYL +TRP+LAY VH L+Q
Sbjct: 923 EAGLLGAKPCGFPIEQNHRLXLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQ 982
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM PR HW+AA+RVVRYLKG+PG+GI L
Sbjct: 983 FMXEPRIEHWEAALRVVRYLKGTPGQGILL 1012
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 127 bits (318), Expect = 2e-27
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGAKP P+E NH+L A+G L NP+ YRRL+G+LIYL +TRP+LAY VH ++Q
Sbjct: 1206 ETGLLGAKPCGFPIEQNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHIISQ 1265
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM PR HW+AA+RVVRYLKG+PG+G+ L
Sbjct: 1266 FMQEPRIEHWEAALRVVRYLKGTPGQGVLL 1295
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 125 bits (315), Expect = 4e-27
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
EMGLLGA+P++ P+E NH+L+ ++ L + RYRRL+G+LIYL +TRPEL+Y VHTLAQ
Sbjct: 854 EMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQ 913
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFLS 3
FM PR HW+AAIRVVRYLK +PG+GI LS
Sbjct: 914 FMQNPRQDHWNAAIRVVRYLKSNPGQGILLS 944
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 125 bits (315), Expect = 4e-27
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
EMGLLGA+P++ P+E NH+L+ ++ L + RYRRL+G+LIYL +TRPEL+Y VHTLAQ
Sbjct: 854 EMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQ 913
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFLS 3
FM PR HW+AAIRVVRYLK +PG+GI LS
Sbjct: 914 FMQNPRQDHWNAAIRVVRYLKSNPGQGILLS 944
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 125 bits (315), Expect = 4e-27
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
EMGLLGA+P++ P+E NH+L+ ++ L + RYRRL+G+LIYL +TRPEL+Y VHTLAQ
Sbjct: 1213 EMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLVVTRPELSYSVHTLAQ 1272
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFLS 3
FM PR HW+AAIRVVRYLK +PG+GI LS
Sbjct: 1273 FMQNPRQDHWNAAIRVVRYLKSNPGQGILLS 1303
>emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]
Length = 992
Score = 123 bits (309), Expect = 2e-26
Identities = 57/90 (63%), Positives = 69/90 (76%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E LLGAKP P+E NH L A+G L NP+ YRRL+G+LIYL +TRP+LAY VH L+Q
Sbjct: 823 EAXLLGAKPCGFPIEKNHILGLANGELLXNPESYRRLVGRLIYLAVTRPDLAYSVHILSQ 882
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM PR HW+AA+RVVRYLKG+PG+GI L
Sbjct: 883 FMQEPRIEHWEAALRVVRYLKGTPGQGILL 912
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 122 bits (306), Expect = 5e-26
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGAKP P+E NH+L A+G L N + YRRL+G+LIYL +TRP+LAY VH L+Q
Sbjct: 1206 EAGLLGAKPCGFPIEQNHRLGLANGELLSNLESYRRLVGRLIYLAVTRPDLAYSVHILSQ 1265
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM PR HW+AA+RVV YLKG+PG+GI L
Sbjct: 1266 FMQEPRIEHWEAALRVVHYLKGTPGQGILL 1295
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 121 bits (303), Expect = 1e-25
Identities = 57/91 (62%), Positives = 70/91 (76%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
+ G LG++PA TP+E NH LA G L +P YRRL+G+L+YL TRPEL+Y VH LAQ
Sbjct: 1246 DSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLYLLHTRPELSYSVHVLAQ 1305
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFLS 3
FM PR AH+DAA+RVVRYLKGSPG+GI L+
Sbjct: 1306 FMQNPREAHFDAALRVVRYLKGSPGQGILLN 1336
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 120 bits (302), Expect = 1e-25
Identities = 55/90 (61%), Positives = 67/90 (74%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGAKP +E NH+L A+G L NP+ YRRL+G+LIYL +TRP LAY VH L+Q
Sbjct: 874 EAGLLGAKPCGFSIEQNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPNLAYSVHILSQ 933
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM PR HW+ A+RVV YLKG+PG+GI L
Sbjct: 934 FMQEPRIEHWEVALRVVHYLKGTPGQGILL 963
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 120 bits (300), Expect = 2e-25
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
+ G LGA+PA TP+E NH LA G L +P +RRL+G+L+YL TRPEL+Y VH L+Q
Sbjct: 1236 DSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLYLLHTRPELSYSVHVLSQ 1295
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFLS 3
FM APR AH +AA+R+VRYLKGSPG+GI LS
Sbjct: 1296 FMQAPREAHLEAAMRIVRYLKGSPGQGILLS 1326
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 120 bits (300), Expect = 2e-25
Identities = 55/90 (61%), Positives = 68/90 (75%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGAKP +E NH+L A+G L NP+ YRRL+G+LIYL +TRP+LAY VH L+Q
Sbjct: 1050 EXGLLGAKPCGFXIEQNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHXLSQ 1109
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM PR HW+AA+RV RYLKG+ G+GI L
Sbjct: 1110 FMQEPRIEHWEAALRVXRYLKGTXGQGILL 1139
>emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera]
Length = 514
Score = 119 bits (298), Expect = 4e-25
Identities = 56/90 (62%), Positives = 70/90 (77%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGAK A TP+E NH+LA A+ S +P +YRRL+G LIYLT+TRP+L+Y VH LAQ
Sbjct: 277 EAGLLGAKLAGTPLEQNHKLALAANSDLRDPGQYRRLVGXLIYLTITRPKLSYCVHMLAQ 336
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM P+ HW+A +RVVRYLKG+PG+ I L
Sbjct: 337 FMQQPKDEHWEATLRVVRYLKGNPGQSILL 366
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 119 bits (298), Expect = 4e-25
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLGA+P P+E NH+LA A+G L ++P YRRL+G+LIYLT+TRP+L Y VH L+Q
Sbjct: 1061 ECGLLGARPVEFPMEENHKLALANGRLLNDPGMYRRLVGRLIYLTVTRPDLTYXVHVLSQ 1120
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM +PR H DAA RVVRYLK PG+GI L
Sbjct: 1121 FMQSPREEHLDAAYRVVRYLKKGPGQGIVL 1150
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 117 bits (292), Expect = 2e-24
Identities = 51/90 (56%), Positives = 68/90 (75%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
+ GL G KP P+E N +L G L +P RYRRL+G+LIYLT+TRP++ Y V TL+Q
Sbjct: 1474 DTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRLVGRLIYLTVTRPDIVYSVRTLSQ 1533
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM+ PR HW+AA+RV+RY+KGSPG+G+FL
Sbjct: 1534 FMNTPRKPHWEAALRVLRYIKGSPGQGLFL 1563
>gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1102
Score = 117 bits (292), Expect = 2e-24
Identities = 52/90 (57%), Positives = 68/90 (75%)
Frame = -3
Query: 275 EMGLLGAKPASTPVEPNHQLAKASGSLFDNPDRYRRLIGKLIYLTLTRPELAYVVHTLAQ 96
E GLLG KP++ P+E +H+L S +FDNP +YRRL+ + IYLT+TRP+L+Y VH L+Q
Sbjct: 851 EAGLLGYKPSAVPMELHHKLGSISSPVFDNPAQYRRLVDRFIYLTITRPDLSYAVHILSQ 910
Query: 95 FMHAPRHAHWDAAIRVVRYLKGSPGRGIFL 6
FM P AHW A +R+VRYLKGSP +GI L
Sbjct: 911 FMQTPLEAHWHATLRLVRYLKGSPDQGILL 940