BLASTX nr result
ID: Catharanthus23_contig00032116
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032116
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat... 126 3e-27
gb|EOX99093.1| Tetratricopeptide repeat (TPR)-like superfamily p... 122 4e-26
ref|XP_004298038.1| PREDICTED: putative pentatricopeptide repeat... 121 1e-25
ref|XP_006437612.1| hypothetical protein CICLE_v10030697mg [Citr... 119 3e-25
ref|XP_006484517.1| PREDICTED: putative pentatricopeptide repeat... 119 4e-25
ref|NP_196448.2| pentatricopeptide repeat-containing protein [Ar... 119 4e-25
emb|CAC08331.1| putative protein [Arabidopsis thaliana] 119 4e-25
gb|EXB65806.1| hypothetical protein L484_004765 [Morus notabilis] 118 9e-25
ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp.... 118 9e-25
gb|EMJ04464.1| hypothetical protein PRUPE_ppa019788mg, partial [... 116 4e-24
ref|XP_004237169.1| PREDICTED: putative pentatricopeptide repeat... 114 1e-23
ref|XP_002307160.2| hypothetical protein POPTR_0005s09280g [Popu... 114 1e-23
ref|XP_006359301.1| PREDICTED: putative pentatricopeptide repeat... 113 2e-23
ref|XP_006286449.1| hypothetical protein CARUB_v10000227mg [Caps... 113 2e-23
ref|XP_006399321.1| hypothetical protein EUTSA_v10015588mg [Eutr... 111 1e-22
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat... 108 6e-22
gb|EPS71218.1| hypothetical protein M569_03539 [Genlisea aurea] 108 7e-22
gb|ESW14767.1| hypothetical protein PHAVU_007G015700g [Phaseolus... 94 2e-17
ref|XP_006605847.1| PREDICTED: putative pentatricopeptide repeat... 92 5e-17
ref|XP_006836716.1| hypothetical protein AMTR_s00088p00119450 [A... 85 1e-14
>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product
[Vitis vinifera]
Length = 854
Score = 126 bits (317), Expect = 3e-27
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LS ARQNA L +L+ D++NSRC M+PGALG+F RCLGS GLV+EAN LFD VK LC
Sbjct: 138 LSHARQNAPLSLLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVP 197
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
NSYS+NCLLEAISKSG++ L+E+RLKEM
Sbjct: 198 NSYSFNCLLEAISKSGSIDLVEMRLKEM 225
>gb|EOX99093.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 850
Score = 122 bits (307), Expect = 4e-26
Identities = 61/91 (67%), Positives = 70/91 (76%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQNA L+ LA D++NS C M PGALG+ RCLG GLV EAN LFD VKR +C
Sbjct: 134 LSRARQNALLKALALDVVNSHCSMNPGALGFLIRCLGCVGLVDEANNLFDQVKRSGICIP 193
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEMSSL 273
NSYSYNCLLEA+SKSG + L+E+RLKEM L
Sbjct: 194 NSYSYNCLLEALSKSGLIDLVEIRLKEMRGL 224
>ref|XP_004298038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 779
Score = 121 bits (303), Expect = 1e-25
Identities = 56/88 (63%), Positives = 70/88 (79%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQNA ++ LA +++ S CYMTPGALG+F RCLGS LV+EAN LFD + + LC
Sbjct: 131 LSRARQNAPMKALAMELVGSNCYMTPGALGFFLRCLGSVALVEEANILFDEICKKGLCVP 190
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
N YSYNCLLEA+SKSG++ L+E R+KEM
Sbjct: 191 NGYSYNCLLEAVSKSGSIELVEKRMKEM 218
>ref|XP_006437612.1| hypothetical protein CICLE_v10030697mg [Citrus clementina]
gi|557539808|gb|ESR50852.1| hypothetical protein
CICLE_v10030697mg [Citrus clementina]
Length = 845
Score = 119 bits (299), Expect = 3e-25
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRAR+ LRVLA D++ SRC+M+PGALG+ RCLGS GLV+EAN LFD VKR LC
Sbjct: 120 LSRARRIPPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 179
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
N+YSYNCLLEA+ KS +V L+E+RLKEM
Sbjct: 180 NNYSYNCLLEAVCKSCSVDLVEMRLKEM 207
>ref|XP_006484517.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Citrus sinensis]
Length = 845
Score = 119 bits (298), Expect = 4e-25
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRAR+ LRVLA D++ SRC+M+PGALG+ RCLGS GLV+EAN LFD VKR LC
Sbjct: 120 LSRARRIPPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 179
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
N+YSYNCLLEA+ KS +V L+E+RLKEM
Sbjct: 180 NNYSYNCLLEALCKSCSVDLVEMRLKEM 207
>ref|NP_196448.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635617|sp|P0C8Q6.1|PP368_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g08310, mitochondrial; Flags: Precursor
gi|332003898|gb|AED91281.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 832
Score = 119 bits (298), Expect = 4e-25
Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQNASL+ L D+LNSRC+M+PGA G+F RCLG+ GLV EA+++FD V+ LC
Sbjct: 116 LSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVP 175
Query: 181 NSYSYNCLLEAISK--SGNVHLLELRLKEM 264
N+Y+YNCLLEAISK S +V L+E RLKEM
Sbjct: 176 NAYTYNCLLEAISKSNSSSVELVEARLKEM 205
>emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 119 bits (298), Expect = 4e-25
Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQNASL+ L D+LNSRC+M+PGA G+F RCLG+ GLV EA+++FD V+ LC
Sbjct: 116 LSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVP 175
Query: 181 NSYSYNCLLEAISK--SGNVHLLELRLKEM 264
N+Y+YNCLLEAISK S +V L+E RLKEM
Sbjct: 176 NAYTYNCLLEAISKSNSSSVELVEARLKEM 205
>gb|EXB65806.1| hypothetical protein L484_004765 [Morus notabilis]
Length = 820
Score = 118 bits (295), Expect = 9e-25
Identities = 58/88 (65%), Positives = 66/88 (75%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LS ARQNA LR LA D++N C MTPG LG+F RCLGS GLV+EAN LFD V+ LC
Sbjct: 122 LSNARQNAPLRALALDVVNLNCLMTPGGLGFFLRCLGSLGLVKEANILFDQVRTKGLCVP 181
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
N+YSY CL E ISKSG + LLE+RLKEM
Sbjct: 182 NAYSYACLFEVISKSGGIDLLEMRLKEM 209
>ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 118 bits (295), Expect = 9e-25
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQNASL L D+LNSRC M+PGALG+F RCLG+ GLV+EA+++FD V+ LC
Sbjct: 116 LSRARQNASLTALVGDILNSRCLMSPGALGFFIRCLGNAGLVEEASSVFDRVREMGLCVP 175
Query: 181 NSYSYNCLLEAISK--SGNVHLLELRLKEM 264
N+Y+YNCLLEAISK S +V L+E RLKEM
Sbjct: 176 NAYTYNCLLEAISKSNSSSVELVEARLKEM 205
>gb|EMJ04464.1| hypothetical protein PRUPE_ppa019788mg, partial [Prunus persica]
Length = 778
Score = 116 bits (290), Expect = 4e-24
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQN LR +A +++NS C +TPGALG+F RCLGS LVQEAN LFD VK LC
Sbjct: 133 LSRARQNVPLRAMAMEIVNSNCSLTPGALGFFIRCLGSVELVQEANFLFDQVKVKGLCVP 192
Query: 181 NSYSYNCLLEAI--SKSGNVHLLELRLKEM 264
NSYSYNCLLEAI SKS ++ LLE+RL+EM
Sbjct: 193 NSYSYNCLLEAISKSKSSSIELLEMRLQEM 222
>ref|XP_004237169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Solanum lycopersicum]
Length = 852
Score = 114 bits (286), Expect = 1e-23
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LS ARQ S+RVL D++ +CY TP LG+F RCLGSQGLV+EAN LFD +K+ LC
Sbjct: 139 LSGARQIDSMRVLVNDVVKFQCYFTPRGLGFFIRCLGSQGLVKEANELFDQMKKSGLCVP 198
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEMSS 270
N ++YNCLL+AISK G+V L+ELRLKEM S
Sbjct: 199 NCFTYNCLLDAISKGGDVGLIELRLKEMCS 228
>ref|XP_002307160.2| hypothetical protein POPTR_0005s09280g [Populus trichocarpa]
gi|550338460|gb|EEE94156.2| hypothetical protein
POPTR_0005s09280g [Populus trichocarpa]
Length = 835
Score = 114 bits (285), Expect = 1e-23
Identities = 56/88 (63%), Positives = 67/88 (76%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQ A LR L+ D++NSRC M+PGALG+ RCLG+ GLV EAN LFD V++ LC
Sbjct: 113 LSRARQKAPLRALSMDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVP 172
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
NSYSY CL E +SKS + LLE+RLKEM
Sbjct: 173 NSYSYTCLFEVLSKSICIDLLEMRLKEM 200
>ref|XP_006359301.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565387018|ref|XP_006359302.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like isoform X2 [Solanum
tuberosum] gi|565387020|ref|XP_006359303.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like isoform X3 [Solanum
tuberosum]
Length = 852
Score = 113 bits (283), Expect = 2e-23
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LS ARQ S+RVL D++ +CY TP LG+F RCLG+QGLV+EAN LFD +K+ LC
Sbjct: 139 LSGARQIDSMRVLVNDVVRFQCYFTPRGLGFFIRCLGNQGLVKEANELFDQMKKSGLCVP 198
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEMSS 270
N ++YNCLL+A+SK+G+V L+ELRLKEM S
Sbjct: 199 NCFTYNCLLDAVSKAGDVGLIELRLKEMCS 228
>ref|XP_006286449.1| hypothetical protein CARUB_v10000227mg [Capsella rubella]
gi|482555155|gb|EOA19347.1| hypothetical protein
CARUB_v10000227mg [Capsella rubella]
Length = 830
Score = 113 bits (283), Expect = 2e-23
Identities = 57/90 (63%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQNASL+ L D+LNSRC+M+PGALGYF RCLG+ GLV++A +FD V+ LC
Sbjct: 114 LSRARQNASLKALVGDVLNSRCFMSPGALGYFIRCLGNAGLVEDAILVFDRVREMGLCVP 173
Query: 181 NSYSYNCLLEAISK--SGNVHLLELRLKEM 264
N YSYNCL EAISK S + L+E RL EM
Sbjct: 174 NVYSYNCLFEAISKSNSSSAELVEARLDEM 203
>ref|XP_006399321.1| hypothetical protein EUTSA_v10015588mg [Eutrema salsugineum]
gi|557100411|gb|ESQ40774.1| hypothetical protein
EUTSA_v10015588mg [Eutrema salsugineum]
Length = 829
Score = 111 bits (277), Expect = 1e-22
Identities = 54/90 (60%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSRARQNASL+ L D+L+SRC M+PGALG+F RCLG+ GLV+EA+ +FD ++ LC
Sbjct: 113 LSRARQNASLKALVGDVLSSRCLMSPGALGFFIRCLGNAGLVEEASFVFDQIREMGLCVP 172
Query: 181 NSYSYNCLLEAISK--SGNVHLLELRLKEM 264
N+Y+YNCLLEA SK S +V L+E +L+EM
Sbjct: 173 NAYTYNCLLEAFSKSNSSSVDLVETKLEEM 202
>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g08310,
mitochondrial-like [Cucumis sativus]
Length = 849
Score = 108 bits (271), Expect = 6e-22
Identities = 54/88 (61%), Positives = 66/88 (75%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LS AR+NA LR +A D+LN RC MTP ALG F RCLGS GLV+EAN LFD V+ +LC
Sbjct: 132 LSHARKNAPLRAVAMDVLNFRCSMTPRALGVFLRCLGSVGLVEEANYLFDQVRSMDLCIP 191
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
N+YSYNCLLE +SK+ ++ +E RL EM
Sbjct: 192 NNYSYNCLLEILSKTNSIDSIENRLMEM 219
>gb|EPS71218.1| hypothetical protein M569_03539 [Genlisea aurea]
Length = 796
Score = 108 bits (270), Expect = 7e-22
Identities = 54/88 (61%), Positives = 64/88 (72%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LS +RQ LR+L+ L S C PGA GYF RCLGSQGL++EAN+LFD V+ LC+L
Sbjct: 123 LSNSRQKEPLRLLSEQALVSGCNWMPGAFGYFLRCLGSQGLLEEANSLFDQVRILGLCSL 182
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
N YSYNCLLE I+K G+V LLE RL EM
Sbjct: 183 NGYSYNCLLEVIAKRGDVALLEYRLNEM 210
>gb|ESW14767.1| hypothetical protein PHAVU_007G015700g [Phaseolus vulgaris]
Length = 844
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 4 SRARQNASLRVLATDMLNSR-CYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
SR+RQ A LR L + S C TPGALG+ RCLG GL +EA+ +FD ++ LC
Sbjct: 136 SRSRQTAPLRTLVKHLAESAPCSFTPGALGFLIRCLGQVGLAREAHHVFDEMRVKGLCVP 195
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
N Y YNCLLEA+SKSG V L+E RL+EM
Sbjct: 196 NDYCYNCLLEALSKSGEVDLVEARLEEM 223
>ref|XP_006605847.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Glycine max]
Length = 821
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSR-CYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCT 177
LSR+ Q + L+ L + +S C TPGALG+ RCLG GL +EA+ LFD ++ LC
Sbjct: 111 LSRSHQTSPLKTLLKQISDSAPCSFTPGALGFLIRCLGHAGLAREAHHLFDEMRLKGLCV 170
Query: 178 LNSYSYNCLLEAISKSGNVHLLELRLKEM 264
N Y YNCLLEA+SKSG V L+E RL+EM
Sbjct: 171 PNDYCYNCLLEALSKSGEVDLIEARLEEM 199
>ref|XP_006836716.1| hypothetical protein AMTR_s00088p00119450 [Amborella trichopoda]
gi|548839276|gb|ERM99569.1| hypothetical protein
AMTR_s00088p00119450 [Amborella trichopoda]
Length = 858
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/88 (50%), Positives = 57/88 (64%)
Frame = +1
Query: 1 LSRARQNASLRVLATDMLNSRCYMTPGALGYFFRCLGSQGLVQEANALFDGVKRWNLCTL 180
LSR+ Q L+ L D++ RC M+PGALGY RCLG+ L +EAN +F+ C
Sbjct: 125 LSRSGQRIPLKALVKDLMIRRCSMSPGALGYLIRCLGNVCLAEEANHVFERACDLT-CEP 183
Query: 181 NSYSYNCLLEAISKSGNVHLLELRLKEM 264
NSY+YNCLLEA++KS L+E R KEM
Sbjct: 184 NSYTYNCLLEALAKSKRCELVESRFKEM 211