BLASTX nr result
ID: Catharanthus23_contig00032101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032101
(585 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB57553.1| hypothetical protein L484_022659 [Morus notabilis] 143 3e-32
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] 139 7e-31
gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [The... 137 2e-30
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi... 124 1e-26
ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat... 105 7e-21
gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus... 103 3e-20
gb|EPS65272.1| hypothetical protein M569_09500 [Genlisea aurea] 102 6e-20
ref|XP_006840383.1| hypothetical protein AMTR_s00045p00136300 [A... 97 2e-18
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis] 86 7e-15
gb|EMJ21431.1| hypothetical protein PRUPE_ppa001951mg [Prunus pe... 84 2e-14
ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 84 2e-14
ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group] 84 3e-14
ref|XP_002302563.2| hypothetical protein POPTR_0002s15650g [Popu... 83 6e-14
gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indi... 83 6e-14
ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group] g... 83 6e-14
ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containi... 82 8e-14
ref|XP_004288861.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ... 82 1e-13
>gb|EXB57553.1| hypothetical protein L484_022659 [Morus notabilis]
Length = 613
Score = 143 bits (361), Expect = 3e-32
Identities = 79/158 (50%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
Frame = +3
Query: 114 KSFLYWFKIFRCFHIQNSSGTWLPNLSPTYINTLLNRATEFKRIKNALQIHTQLLINGYI 293
K FL +F+ F + S T P+ SPT++N LLN + K +K+A +IH QL+ NGYI
Sbjct: 12 KPFLSSPSLFKLF-VHTSKIT--PSSSPTHLNNLLNNTIQTKNLKHASEIHAQLITNGYI 68
Query: 294 SFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWTSLITQLSHHGQP 473
S PFLFNNL+NSYA+ G++ ++L LFSA AR KN+V WT+L+T+L H +P
Sbjct: 69 SLPFLFNNLLNSYAQCGHIRRSLLLFSA--ARGIP------KNVVAWTTLVTRLYHSHEP 120
Query: 474 FEALNLFGEMRRNG-IYPNHFTFSAVLPACADSMILFH 584
FEAL+LF +M + + PNHFTFSA LPACAD+ I H
Sbjct: 121 FEALSLFSQMISSAHVLPNHFTFSAALPACADTEIAVH 158
Score = 58.5 bits (140), Expect = 1e-06
Identities = 32/119 (26%), Positives = 58/119 (48%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
+++L + + IH Q++ +G++ + N+LI Y++ G L A +F
Sbjct: 349 SSVLGASACLAALDQGTMIHEQIIKSGFMRILCVANSLIKMYSRCGNLNDAYCVFE---- 404
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
+ + +N+V WT++I HG + F M +GI PN+ TF +VL AC+
Sbjct: 405 ------ENEDRNVVCWTAMIAAYQQHGCANQVFESFRAMLGDGIKPNYITFVSVLSACS 457
>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 139 bits (349), Expect = 7e-31
Identities = 74/134 (55%), Positives = 92/134 (68%)
Frame = +3
Query: 183 PNLSPTYINTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQAL 362
P+ SPT++N LLN A + + +K+A QIHTQ++IN Y S PFLFNNLIN YAK G L QAL
Sbjct: 138 PSPSPTHLNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQAL 197
Query: 363 KLFSAPIARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFS 542
LFS TH K IVTWTSLIT LSH +AL+LF +MR +G YPN FTFS
Sbjct: 198 LLFSI-------THH-HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFS 249
Query: 543 AVLPACADSMILFH 584
++L A A +M++ H
Sbjct: 250 SILSASAATMMVLH 263
Score = 67.4 bits (163), Expect = 3e-09
Identities = 35/119 (29%), Positives = 59/119 (49%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
+T+L+ + + IH Q++ GY+ + +LI YAK G L A ++F
Sbjct: 452 STVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEG--- 508
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
++ N+++WT++I+ HG + + LF M GI P+H TF VL AC+
Sbjct: 509 -------IEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS 560
>gb|EOY11777.1| Tetratricopeptide repeat superfamily protein [Theobroma cacao]
Length = 708
Score = 137 bits (346), Expect = 2e-30
Identities = 67/134 (50%), Positives = 92/134 (68%)
Frame = +3
Query: 183 PNLSPTYINTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQAL 362
P+ + T++N LLN K +++A QIH+Q + N ++S PFLFNNL++ YAKSG+++ +L
Sbjct: 27 PSHTVTHLNNLLNTTARTKSLRHAAQIHSQFVTNSFLSVPFLFNNLLSLYAKSGHISHSL 86
Query: 363 KLFSAPIARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFS 542
LFS H + K +V+WT+LI+ LS PFEAL LF MR NG+YPNH+TFS
Sbjct: 87 LLFST-------AHRVP-KGVVSWTTLISHLSRFNTPFEALTLFNHMRSNGVYPNHYTFS 138
Query: 543 AVLPACADSMILFH 584
AVLPACA + IL H
Sbjct: 139 AVLPACASTTILLH 152
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/119 (27%), Positives = 61/119 (51%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
+T L+ + + IH Q++ G+ + ++LI YAK G L A ++F
Sbjct: 341 STALHASAHLAALGQGTLIHNQIIKTGFSKNTCIASSLITMYAKCGSLDDARRVFE---- 396
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
++ ++N+V WT++I HG + ++LF +M +G+ P++ TF VL AC+
Sbjct: 397 ------EIKNRNVVCWTAMIAACQQHGNGNQVIDLFEKMLADGLKPDYITFVCVLSACS 449
>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 124 bits (312), Expect = 1e-26
Identities = 68/135 (50%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Frame = +3
Query: 183 PNLSP-TYINTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQA 359
P L P T +N+LLN + + K+A QIH+QL+ +S PFLFNNL+N YAK G + Q
Sbjct: 25 PFLHPLTSLNSLLNCS---RTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQT 81
Query: 360 LKLFSAPIARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTF 539
L LFS+ D KN+V+WTSLITQL+ +PF+AL F MRR+G+YPNH+TF
Sbjct: 82 LLLFSSAPD--------DSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTF 133
Query: 540 SAVLPACADSMILFH 584
SAVL AC D+ H
Sbjct: 134 SAVLSACTDTTASVH 148
Score = 65.9 bits (159), Expect = 8e-09
Identities = 34/119 (28%), Positives = 61/119 (51%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
+++L+ + IH Q++ +G++ + ++LI YAK G L A ++F
Sbjct: 337 SSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFE---- 392
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
+ + +N+V WT++I HG + LF +M R GI P++ TF +VL AC+
Sbjct: 393 ------ETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACS 445
>ref|XP_003520781.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1135
Score = 105 bits (263), Expect = 7e-21
Identities = 60/156 (38%), Positives = 86/156 (55%)
Frame = +3
Query: 111 AKSFLYWFKIFRCFHIQNSSGTWLPNLSPTYINTLLNRATEFKRIKNALQIHTQLLINGY 290
++ +W ++F + Q+ + S + LLN A + K +K+A QIH+QL+
Sbjct: 71 SREVAFWLQLFTSY--QSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNN 128
Query: 291 ISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWTSLITQLSHHGQ 470
+ N L+ YAK G + L LF+ T+ N+VTWT+LI QLS +
Sbjct: 129 HASLANINTLLLLYAKCGSIHHTLLLFN--------TYPHPSTNVVTWTTLINQLSRSNK 180
Query: 471 PFEALNLFGEMRRNGIYPNHFTFSAVLPACADSMIL 578
PF+AL F MR GIYPNHFTFSA+LPACA + +L
Sbjct: 181 PFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALL 216
Score = 68.9 bits (167), Expect = 9e-10
Identities = 37/119 (31%), Positives = 61/119 (51%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
++L + + + IH+ +L G++ + ++L+ Y K G + A ++F
Sbjct: 404 SSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVF----- 458
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
R TK H N+V WT++IT HG EA+ LF EM G+ P + TF +VL AC+
Sbjct: 459 RETKEH-----NVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACS 512
Score = 63.2 bits (152), Expect = 5e-08
Identities = 34/118 (28%), Positives = 58/118 (49%)
Frame = +3
Query: 210 TLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIAR 389
+L + + + IH+ +L G++ + ++L+ Y K G + A ++F R
Sbjct: 851 SLFHASASIAALTQGTMIHSHVLKTGHVKDSHISSSLVTMYGKCGSMLDAYQVF-----R 905
Query: 390 ATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
TK H +V WT++IT HG EA+ LF EM G+ P + TF ++L C+
Sbjct: 906 ETKEH-----YVVCWTAMITVFHLHGCANEAIELFEEMLNEGVVPEYITFISILSVCS 958
>gb|ESW35278.1| hypothetical protein PHAVU_001G221600g [Phaseolus vulgaris]
Length = 701
Score = 103 bits (257), Expect = 3e-20
Identities = 56/121 (46%), Positives = 77/121 (63%)
Frame = +3
Query: 216 LNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARAT 395
LN+A + K +K+A QIH+Q++ S + N+LI YAK G + A+ LF +T
Sbjct: 35 LNKAAKLKNLKHATQIHSQIVTTNRTSLGNI-NSLIVVYAKCGSIKHAVLLFGTTPRAST 93
Query: 396 KTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADSMI 575
++VTWT+LITQLSH +PF+AL+ F MR GIYPN FTFSA+LPACA + +
Sbjct: 94 --------SVVTWTTLITQLSHFNKPFQALSSFNLMRTTGIYPNQFTFSAILPACAHATL 145
Query: 576 L 578
L
Sbjct: 146 L 146
Score = 65.9 bits (159), Expect = 8e-09
Identities = 38/119 (31%), Positives = 61/119 (51%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
++LL+ + + IH +L G++ + ++L+ Y K G L A ++F
Sbjct: 334 SSLLHASASISALAQGTLIHCHVLKTGHMKNACVSSSLVTMYGKCGSLFDAYRVFG---- 389
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
+T D N+V WT++IT HG EA+ LF EM + GI P + TF +VL AC+
Sbjct: 390 ---ETKDC---NVVCWTAMITVCHQHGCANEAIELFEEMLKEGIVPEYITFVSVLSACS 442
>gb|EPS65272.1| hypothetical protein M569_09500 [Genlisea aurea]
Length = 573
Score = 102 bits (255), Expect = 6e-20
Identities = 55/107 (51%), Positives = 68/107 (63%)
Frame = +3
Query: 246 KNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNI 425
++A QIH QLL IS P LFN L+ Y++ G + Q+L LFS + T D KN+
Sbjct: 33 RHAAQIHAQLLTRSRISSPVLFNKLLALYSRCGQVLQSLALFSNSDS-GTNFDDSAAKNV 91
Query: 426 VTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACAD 566
T+TSLITQLS P AL+ F EMR I+PNHFTFSA+LPAC D
Sbjct: 92 FTYTSLITQLSRSALPVRALSYFNEMRCRSIFPNHFTFSAILPACGD 138
Score = 59.3 bits (142), Expect = 7e-07
Identities = 32/119 (26%), Positives = 62/119 (52%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
+T+L+ A + + IH +++ G+ + LI+ YAK G A + F+
Sbjct: 333 STVLHAAASGASLDQGISIHARVVKYGFGGNSCVSTPLISMYAKCGSFLDAERAFA---- 388
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
+ ++++TWT++I+ + HG+ + +F +M R+G+ P+ TF +VL ACA
Sbjct: 389 ------ETGIRSVLTWTAMISAVHRHGRADRVIQVFDDMIRDGVEPDRVTFVSVLSACA 441
>ref|XP_006840383.1| hypothetical protein AMTR_s00045p00136300 [Amborella trichopoda]
gi|548842101|gb|ERN02058.1| hypothetical protein
AMTR_s00045p00136300 [Amborella trichopoda]
Length = 194
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/123 (38%), Positives = 71/123 (57%)
Frame = +3
Query: 192 SPTYINTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLF 371
+PT ++ L++ T + IKN + H Q++ G SFPFL N+LIN YAK G ++L +F
Sbjct: 35 TPTDFSSQLSKFTHLQNIKNGRKAHAQIIKTGCTSFPFLHNSLINMYAKCGQTYESLLIF 94
Query: 372 SAPIARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVL 551
+ N+++WTS I+ P++A++LF MRR G PN FT SA+L
Sbjct: 95 EST----------QENNVISWTSAISAFVRGNMPYKAMSLFSRMRREGTQPNQFTLSAIL 144
Query: 552 PAC 560
P+C
Sbjct: 145 PSC 147
>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
Length = 750
Score = 85.9 bits (211), Expect = 7e-15
Identities = 48/124 (38%), Positives = 66/124 (53%)
Frame = +3
Query: 195 PTYINTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFS 374
P N LL R TE ++++ +H L + + P + N ++N YAK G L A KLF
Sbjct: 76 PPLYNRLLKRCTEMRKLREGKMVHAHFLNSQFRDDPVIGNTILNMYAKCGSLADARKLFD 135
Query: 375 APIARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLP 554
++ K+IVTWT+LI+ S H Q EAL LF M R G+ PN FT S++L
Sbjct: 136 ----------EMPLKDIVTWTALISGYSQHDQAEEALALFPLMLRRGLEPNQFTLSSLLK 185
Query: 555 ACAD 566
A D
Sbjct: 186 ASGD 189
Score = 66.6 bits (161), Expect = 4e-09
Identities = 39/122 (31%), Positives = 62/122 (50%)
Frame = +3
Query: 204 INTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPI 383
+++LL + + K Q+H L GY S ++ ++L++ YA+ G+L +A +F +
Sbjct: 180 LSSLLKASGDGTTNKRGRQLHAYCLKCGYDSDVYVGSSLVDMYARYGHLVEARLIFDGLV 239
Query: 384 ARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
KN V+W +LI S G+ AL LF M R P HFTFS++ ACA
Sbjct: 240 T----------KNEVSWNALIAGHSRKGETENALRLFSMMHREDFKPTHFTFSSLCTACA 289
Query: 564 DS 569
+
Sbjct: 290 ST 291
Score = 60.1 bits (144), Expect = 4e-07
Identities = 32/103 (31%), Positives = 53/103 (51%)
Frame = +3
Query: 261 IHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWTS 440
+H Q++ +G F+ N L++ YAKSG + A K+F + R ++V+W S
Sbjct: 300 VHAQVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVKR----------DVVSWNS 349
Query: 441 LITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADS 569
++ + G+ AL LF M R P FT+S++ ACA +
Sbjct: 350 MLNGYARKGETENALRLFSMMHREDFKPTDFTYSSLCTACAST 392
Score = 55.8 bits (133), Expect = 8e-06
Identities = 32/106 (30%), Positives = 55/106 (51%)
Frame = +3
Query: 261 IHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWTS 440
+H ++ +G F+ N L++ YAKSG + A K+F + R ++V+W S
Sbjct: 401 VHAHVIKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVKR----------DVVSWNS 450
Query: 441 LITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADSMIL 578
++ + HG + + F EM +GI P TF +VL AC+ + +L
Sbjct: 451 MLRGYAQHGLGRKTVQHFEEMMTSGIEPISVTFLSVLTACSHAGLL 496
>gb|EMJ21431.1| hypothetical protein PRUPE_ppa001951mg [Prunus persica]
Length = 737
Score = 84.3 bits (207), Expect = 2e-14
Identities = 44/123 (35%), Positives = 72/123 (58%)
Frame = +3
Query: 210 TLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIAR 389
++LN K +KNA+ IH ++ G+ + + N L++ YAK G + AL++F
Sbjct: 269 SVLNSLAALKDMKNAMVIHCLIVKTGFEVYQLVGNALVDMYAKQGNIDCALEVFK----- 323
Query: 390 ATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADS 569
+ K++++WTSL+T +H+G +AL LF EMR GIYP+ F ++VL ACA+
Sbjct: 324 -----HMSDKDVISWTSLVTGYAHNGSHEKALRLFCEMRTAGIYPDQFVIASVLIACAEL 378
Query: 570 MIL 578
+L
Sbjct: 379 TVL 381
>ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 84.3 bits (207), Expect = 2e-14
Identities = 46/116 (39%), Positives = 66/116 (56%)
Frame = +3
Query: 216 LNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARAT 395
++ A IK QIH+ +L GY S + N+LI+ YAKSG ++ A + F+
Sbjct: 672 ISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFN------- 724
Query: 396 KTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
D+ +N+++W ++IT S HG EAL LF EM+ GI PNH TF VL AC+
Sbjct: 725 ---DMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777
Score = 63.5 bits (153), Expect = 4e-08
Identities = 35/100 (35%), Positives = 58/100 (58%)
Frame = +3
Query: 258 QIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWT 437
Q+H++ G+ S P + N LI+ Y+K+GY+ A K+F+ + K+IVTW
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC----------ICMKDIVTWV 230
Query: 438 SLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPA 557
++I+ LS +G EA+ LF +M + I+P + S+VL A
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSA 270
Score = 57.0 bits (136), Expect = 3e-06
Identities = 49/174 (28%), Positives = 83/174 (47%)
Frame = +3
Query: 42 FSASEV*SLVMRVQLPLKYGKTEAKSFLYWFKIFRCFHIQNSSGTWLPNLSPTYINTLLN 221
F +E ++V+ + + YG+ + S F+IFR ++ +PN TY ++L
Sbjct: 420 FLXTETENIVLWNVMLVAYGQLDNLSDS--FEIFRQMQMEGM----IPNQF-TY-PSILR 471
Query: 222 RATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKT 401
T + QIHT ++ G+ ++ + LI+ YAK G L AL++
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR-------- 523
Query: 402 HDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
L ++V+WT++I H EAL LF EM GI ++ F++ + ACA
Sbjct: 524 --LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACA 575
>ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 84.3 bits (207), Expect = 2e-14
Identities = 46/116 (39%), Positives = 66/116 (56%)
Frame = +3
Query: 216 LNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARAT 395
++ A IK QIH+ +L GY S + N+LI+ YAKSG ++ A + F+
Sbjct: 672 ISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFN------- 724
Query: 396 KTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
D+ +N+++W ++IT S HG EAL LF EM+ GI PNH TF VL AC+
Sbjct: 725 ---DMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777
Score = 63.5 bits (153), Expect = 4e-08
Identities = 35/100 (35%), Positives = 58/100 (58%)
Frame = +3
Query: 258 QIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWT 437
Q+H++ G+ S P + N LI+ Y+K+GY+ A K+F+ + K+IVTW
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC----------ICMKDIVTWV 230
Query: 438 SLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPA 557
++I+ LS +G EA+ LF +M + I+P + S+VL A
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSA 270
Score = 57.4 bits (137), Expect = 3e-06
Identities = 49/174 (28%), Positives = 83/174 (47%)
Frame = +3
Query: 42 FSASEV*SLVMRVQLPLKYGKTEAKSFLYWFKIFRCFHIQNSSGTWLPNLSPTYINTLLN 221
F +E ++V+ + + YG+ + S F+IFR ++ +PN TY ++L
Sbjct: 420 FLTTETENIVLWNVMLVAYGQLDNLSDS--FEIFRQMQMEGM----IPNQF-TY-PSILR 471
Query: 222 RATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKT 401
T + QIHT ++ G+ ++ + LI+ YAK G L AL++
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR-------- 523
Query: 402 HDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
L ++V+WT++I H EAL LF EM GI ++ F++ + ACA
Sbjct: 524 --LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACA 575
>emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/128 (37%), Positives = 67/128 (52%)
Frame = +3
Query: 177 WLPNLSPTYINTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQ 356
+LP I LL + ++ +Q+H L+ G+ S L NNLI+ YAK G L
Sbjct: 194 FLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHM 253
Query: 357 ALKLFSAPIARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFT 536
A ++F + +N+V+WT+L+ HHG+ E L LFGEMR +G PN FT
Sbjct: 254 AGEVFDG----------MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFT 303
Query: 537 FSAVLPAC 560
SA L AC
Sbjct: 304 LSATLKAC 311
>ref|XP_002302563.2| hypothetical protein POPTR_0002s15650g [Populus trichocarpa]
gi|550345094|gb|EEE81836.2| hypothetical protein
POPTR_0002s15650g [Populus trichocarpa]
Length = 800
Score = 82.8 bits (203), Expect = 6e-14
Identities = 42/123 (34%), Positives = 73/123 (59%)
Frame = +3
Query: 210 TLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIAR 389
++LN K ++NA+ +H ++ G+ ++ + N LI+ YAK G L A+ +FS +
Sbjct: 332 SVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMV-- 389
Query: 390 ATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADS 569
K++V+WTSL+T SH+G EA+ LF +MR +G+YP+ ++VL ACA+
Sbjct: 390 --------DKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAEL 441
Query: 570 MIL 578
++
Sbjct: 442 TVM 444
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/124 (30%), Positives = 63/124 (50%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
N +L ++ RI +A + ++L F +N ++ YA SG LT+A KLF
Sbjct: 31 NRVLKDLSKRGRIDDARNLFDKMLDRD----EFSWNTMVAGYANSGRLTEAKKLF----- 81
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACAD 566
++ K+ +TWTSL++ +G EA LF EM+ G P+ +T +VL C+
Sbjct: 82 -----YETPMKSSITWTSLLSGYCRYGFENEAFELFLEMQLEGQRPSQYTLGSVLGLCST 136
Query: 567 SMIL 578
+ +L
Sbjct: 137 NGLL 140
>gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 82.8 bits (203), Expect = 6e-14
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +3
Query: 204 INTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPI 383
I LL + ++ +Q+H L+ G+ S L NNLI+ YAK G L A ++F
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDG-- 64
Query: 384 ARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPAC 560
+ +N+V+WT+L+ HHG+ E L LFGEMR +G PN FT SA L AC
Sbjct: 65 --------MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC 115
>ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza
sativa Japonica Group] gi|113565898|dbj|BAF16241.1|
Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein
OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 82.8 bits (203), Expect = 6e-14
Identities = 46/119 (38%), Positives = 64/119 (53%)
Frame = +3
Query: 204 INTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPI 383
I LL + ++ +Q+H L+ G+ S L NNLI+ YAK G L A ++F
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDG-- 64
Query: 384 ARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPAC 560
+ +N+V+WT+L+ HHG+ E L LFGEMR +G PN FT SA L AC
Sbjct: 65 --------MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC 115
>ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Solanum lycopersicum]
Length = 914
Score = 82.4 bits (202), Expect = 8e-14
Identities = 44/118 (37%), Positives = 66/118 (55%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
++LLN + QIH +L G++S F N+L+N YAK G + A F
Sbjct: 546 SSLLNACANLSAYEQGKQIHAHVLKFGFMSDVFAGNSLVNMYAKCGSIEDASCAF----- 600
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPAC 560
H++ K IV+W+++I L+ HG +AL+LFGEM ++G+ PNH T +VL AC
Sbjct: 601 -----HEVPKKGIVSWSAMIGGLAQHGHAKQALHLFGEMLKDGVSPNHITLVSVLYAC 653
Score = 69.7 bits (169), Expect = 5e-10
Identities = 41/120 (34%), Positives = 62/120 (51%)
Frame = +3
Query: 204 INTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPI 383
++ +LN T I +IH L+ GY S PF N L++ YAK G L A+ F +
Sbjct: 242 LSNILNACTGLGDIVEGKKIHGYLVKLGYGSDPFSSNALVDMYAKGGDLKDAITAFEGIV 301
Query: 384 ARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
+IV+W ++I H +A+++ +MRR+GI+PN FT S+ L ACA
Sbjct: 302 V----------PDIVSWNAIIAGCVLHECQGQAIDMLNQMRRSGIWPNMFTLSSALKACA 351
>ref|XP_004288861.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Fragaria vesca subsp. vesca]
Length = 810
Score = 82.0 bits (201), Expect = 1e-13
Identities = 42/123 (34%), Positives = 72/123 (58%)
Frame = +3
Query: 210 TLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIAR 389
++LN K +KNA+ IH ++ G+ + + N L++ YAK G + A+++F
Sbjct: 342 SVLNSFAALKEVKNAVAIHCLIVKTGFEVYQLVGNALVDMYAKLGNIEFAVEMFRY---- 397
Query: 390 ATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADS 569
+ K++++WTSL+T + +G +AL LF EMR GIYP+HF +++L ACA+
Sbjct: 398 ------MPDKDVISWTSLVTGYAQNGSHEKALKLFCEMRDAGIYPDHFIIASILSACAEL 451
Query: 570 MIL 578
+L
Sbjct: 452 TLL 454
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/125 (27%), Positives = 65/125 (52%)
Frame = +3
Query: 204 INTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPI 383
I ++L+ E ++ QIH + +G + + N+ + YAK G L +AL++F +
Sbjct: 441 IASILSACAELTLLEFGQQIHANFIKSGLQASLSVDNSFLTLYAKCGCLEEALRVFDS-- 498
Query: 384 ARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACA 563
+ +N++TWT+LI + +G+ E+L + +M G P+ TF +L AC+
Sbjct: 499 --------MQVQNVITWTALIVGYAQNGRGKESLKFYNQMLATGTQPDFITFIGLLFACS 550
Query: 564 DSMIL 578
+ +L
Sbjct: 551 HAGLL 555
>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Citrus sinensis]
Length = 670
Score = 81.6 bits (200), Expect = 1e-13
Identities = 45/117 (38%), Positives = 69/117 (58%)
Frame = +3
Query: 207 NTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIA 386
NTLL + T K++K A +H +L + + + + N ++N+YAK G L +A KLF
Sbjct: 100 NTLLKKCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFD---- 155
Query: 387 RATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPA 557
++ K++VTWT+LI+ S + QP A+ LF +M R G+ PN FT S+VL A
Sbjct: 156 ------EMPVKDMVTWTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKA 206
Score = 63.5 bits (153), Expect = 4e-08
Identities = 35/106 (33%), Positives = 57/106 (53%)
Frame = +3
Query: 261 IHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWTS 440
+H ++ +G F+ N L++ YAKSG + A K+F+ + R ++V+W S
Sbjct: 321 VHAHVIKSGGQLVAFVGNTLVDMYAKSGSIEDAEKVFNRLLKR----------DVVSWNS 370
Query: 441 LITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADSMIL 578
++T + HG + F +M RNGI PN TF VL AC+ + +L
Sbjct: 371 MLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFLCVLTACSHAGLL 416
>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331463|gb|EFH61882.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 624
Score = 81.6 bits (200), Expect = 1e-13
Identities = 48/138 (34%), Positives = 74/138 (53%)
Frame = +3
Query: 150 FHIQNSSGTWLPNLSPTYINTLLNRATEFKRIKNALQIHTQLLINGYISFPFLFNNLINS 329
F + G+++P + + NTLL + T FK + +H L+ + + + N L+N
Sbjct: 37 FPSNDLEGSYIP-VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNM 95
Query: 330 YAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWTSLITQLSHHGQPFEALNLFGEMRR 509
YAK G L +A K+F + ++ VTWT+LI+ S H +PF+AL LF +M R
Sbjct: 96 YAKCGSLEEARKVFDK----------MPERDFVTWTTLISGYSQHDRPFDALVLFNQMLR 145
Query: 510 NGIYPNHFTFSAVLPACA 563
G PN FT S+V+ A A
Sbjct: 146 FGFSPNEFTLSSVIKAAA 163
Score = 68.6 bits (166), Expect = 1e-09
Identities = 39/106 (36%), Positives = 58/106 (54%)
Frame = +3
Query: 261 IHTQLLINGYISFPFLFNNLINSYAKSGYLTQALKLFSAPIARATKTHDLDHKNIVTWTS 440
+H ++ +G F N L++ YAKSG + A K+F L +++V+W S
Sbjct: 275 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR----------LAKRDVVSWNS 324
Query: 441 LITQLSHHGQPFEALNLFGEMRRNGIYPNHFTFSAVLPACADSMIL 578
L+T + HG EA+ F EMRR GI PN +F +VL AC+ S +L
Sbjct: 325 LLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLL 370