BLASTX nr result

ID: Catharanthus23_contig00032077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00032077
         (497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004891653.1| unnamed protein product (chloroplast) [Nicot...    67   2e-09
ref|YP_001109573.1| hypothetical protein Poptr_cp096 [Populus tr...    44   5e-06

>ref|YP_004891653.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|351653955|ref|YP_004891682.1| unnamed protein product
           (chloroplast) [Nicotiana undulata]
           gi|11873|emb|CAA77388.1| hypothetical protein [Nicotiana
           tabacum] gi|1223685|emb|CAA77405.1| hypothetical protein
           [Nicotiana tabacum] gi|77799611|dbj|BAE46700.1|
           hypothetical protein [Nicotiana sylvestris]
           gi|77799641|dbj|BAE46730.1| hypothetical protein
           [Nicotiana sylvestris] gi|80750973|dbj|BAE48049.1|
           hypothetical protein [Nicotiana tomentosiformis]
           gi|80751003|dbj|BAE48079.1| hypothetical protein
           [Nicotiana tomentosiformis] gi|347453933|gb|AEO95591.1|
           hypothetical protein (chloroplast) [Nicotiana undulata]
           gi|347453981|gb|AEO95639.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454044|gb|AEO95701.1| hypothetical protein
           [synthetic construct] gi|347454090|gb|AEO95747.1|
           hypothetical protein [synthetic construct]
           gi|225244|prf||1211235CC ORF 115
          Length = 115

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = -2

Query: 142 DPSSWNWNKFGSRSRNLGDLLYLMNGVSALKLSA 41
           DPSSWNWNKFGS SRNLGDLLYLMNG SALK SA
Sbjct: 19  DPSSWNWNKFGSGSRNLGDLLYLMNGESALKSSA 52


>ref|YP_001109573.1| hypothetical protein Poptr_cp096 [Populus trichocarpa]
           gi|133712134|gb|ABO36777.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 71

 Score = 44.3 bits (103), Expect(2) = 5e-06
 Identities = 21/28 (75%), Positives = 21/28 (75%)
 Frame = -2

Query: 151 DSIDPSSWNWNKFGSRSRNLGDLLYLMN 68
           DSI     NWNKFG  SRNLGDLLYLMN
Sbjct: 17  DSIRDLLLNWNKFGRGSRNLGDLLYLMN 44



 Score = 31.6 bits (70), Expect(2) = 5e-06
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = -1

Query: 80 LSNEWGVCFKIIRP 39
          ++NEWGVCF+I+RP
Sbjct: 43 MNNEWGVCFEIVRP 56


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