BLASTX nr result
ID: Catharanthus23_contig00031975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031975
(289 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 132 4e-29
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 132 4e-29
ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat... 129 3e-28
ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat... 129 3e-28
ref|XP_002308333.2| pentatricopeptide repeat-containing family p... 129 5e-28
ref|XP_002333469.1| predicted protein [Populus trichocarpa] 129 5e-28
gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus pe... 126 3e-27
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis] 125 4e-27
ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat... 125 6e-27
gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protei... 125 7e-27
ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat... 123 3e-26
gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus... 120 2e-25
ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat... 116 3e-24
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr... 116 3e-24
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat... 114 1e-23
gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlise... 112 5e-23
ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat... 111 9e-23
ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat... 111 1e-22
ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [A... 110 2e-22
ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Caps... 110 2e-22
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 132 bits (333), Expect = 4e-29
Identities = 60/94 (63%), Positives = 79/94 (84%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
++++ GPE TL QY GSL+HGLLR+GR++EA +++S+K IGI P+VH+YTSLI HFF
Sbjct: 860 LVDEVGPERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVHVYTSLIVHFF 919
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KEKQ+ KALE F+ MKEEGCEPT+VTYSA+I G+
Sbjct: 920 KEKQMRKALETFQKMKEEGCEPTIVTYSALIRGH 953
>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1072
Score = 132 bits (333), Expect = 4e-29
Identities = 60/94 (63%), Positives = 80/94 (85%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
++++ G E TL QYT G+L+HGLLRKGR EEA A++ES+K GI+P+VH+YTSLI HFF
Sbjct: 882 LLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFF 941
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KEKQ+ KA++IF+ M+++GCEPTVVTYSA+I GY
Sbjct: 942 KEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGY 975
>ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 1037
Score = 129 bits (325), Expect = 3e-28
Identities = 59/95 (62%), Positives = 75/95 (78%)
Frame = -1
Query: 286 EMIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHF 107
EM++ G E TL +YT GS +HGLLR G++EEA A+MES+K G+ P+VH+YTSLI HF
Sbjct: 847 EMMDDIGEERSTLDRYTYGSFVHGLLRSGQVEEALAKMESMKQAGMKPTVHVYTSLIVHF 906
Query: 106 FKEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KEKQ+ +ALEIF M++EGCEPTVVTYS +I GY
Sbjct: 907 LKEKQIKRALEIFNEMQQEGCEPTVVTYSTLIRGY 941
>ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 1038
Score = 129 bits (325), Expect = 3e-28
Identities = 59/95 (62%), Positives = 75/95 (78%)
Frame = -1
Query: 286 EMIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHF 107
EM++ G E TL +YT GS +HGLLR G++EEA A+MES+K G+ P+VH+YTSLI HF
Sbjct: 847 EMMDDIGEERSTLDRYTYGSFVHGLLRSGQVEEALAKMESMKQAGMKPTVHVYTSLIVHF 906
Query: 106 FKEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KEKQ+ +ALEIF M++EGCEPTVVTYS +I GY
Sbjct: 907 LKEKQIKRALEIFNEMQQEGCEPTVVTYSTLIRGY 941
>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336797|gb|EEE91856.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1048
Score = 129 bits (323), Expect = 5e-28
Identities = 57/94 (60%), Positives = 79/94 (84%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
++++ E TL +YT SL+HGLL+KGR+EEA A+++S+K +GI+P+VH+YTSLI HFF
Sbjct: 859 LVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFF 918
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
+EK KALEIF++MK+EGCEPT+VTYSA+I GY
Sbjct: 919 REKLASKALEIFESMKQEGCEPTIVTYSALIRGY 952
>ref|XP_002333469.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 129 bits (323), Expect = 5e-28
Identities = 57/94 (60%), Positives = 79/94 (84%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
++++ E TL +YT SL+HGLL+KGR+EEA A+++S+K +GI+P+VH+YTSLI HFF
Sbjct: 859 LVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFF 918
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
+EK KALEIF++MK+EGCEPT+VTYSA+I GY
Sbjct: 919 REKLASKALEIFESMKQEGCEPTIVTYSALIRGY 952
>gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
Length = 893
Score = 126 bits (316), Expect = 3e-27
Identities = 57/83 (68%), Positives = 72/83 (86%)
Frame = -1
Query: 250 LKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFFKEKQVCKALEI 71
L QYT GSL+HGLLR G++E A A+++S+K GI+P+VH+YTSLI HFFKEKQ+ KALEI
Sbjct: 715 LDQYTYGSLVHGLLRSGQLEAALAKVDSMKQAGINPTVHVYTSLIVHFFKEKQIGKALEI 774
Query: 70 FKNMKEEGCEPTVVTYSAIIHGY 2
FK M++EGCEPT+VTYSA+I GY
Sbjct: 775 FKEMQQEGCEPTIVTYSALIRGY 797
>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
Length = 1039
Score = 125 bits (315), Expect = 4e-27
Identities = 59/94 (62%), Positives = 74/94 (78%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
+ ++ G E TL Q T GS+ HGLLRKGR+EEA A+M+S+K GI+P+VH+YTSLI HF
Sbjct: 849 LADEIGEEKTTLDQSTYGSIFHGLLRKGRVEEALAKMDSMKATGINPTVHVYTSLIVHFL 908
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KEKQ+ KALE + M+EEGCEPT+VTYSA I GY
Sbjct: 909 KEKQIQKALETLQKMREEGCEPTIVTYSAFIKGY 942
>ref|XP_004228915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Solanum lycopersicum]
Length = 1092
Score = 125 bits (314), Expect = 6e-27
Identities = 57/94 (60%), Positives = 72/94 (76%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
+I + E H L QY GSL+HGLL+KG +EEA A +ES+K GI P+VH+YTSLI +FF
Sbjct: 902 LINEVDDEQHVLSQYVYGSLVHGLLQKGNLEEALARIESMKQTGIHPTVHVYTSLIGYFF 961
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
K KQV KAL+ FK MK+ GC+PT+VTYSA+I GY
Sbjct: 962 KVKQVSKALQTFKEMKDSGCQPTIVTYSALIRGY 995
>gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 1050
Score = 125 bits (313), Expect = 7e-27
Identities = 58/95 (61%), Positives = 75/95 (78%)
Frame = -1
Query: 286 EMIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHF 107
EM++ G E TL Y GSL+HGLLRKGR E+A A+++S+K GI P+VH+YTSLI HF
Sbjct: 861 EMLDNVGTEQATLDLYVYGSLVHGLLRKGRFEQALAKVDSMKQAGIYPTVHVYTSLIVHF 920
Query: 106 FKEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
FKE+Q+ +AL IF MK+EGC+PT+VTYSA+I GY
Sbjct: 921 FKERQMERALGIFAKMKKEGCQPTIVTYSAMIRGY 955
>ref|XP_006348568.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Solanum tuberosum]
Length = 1087
Score = 123 bits (308), Expect = 3e-26
Identities = 56/94 (59%), Positives = 71/94 (75%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
+I + E H L QY GSL+HGLL+KG++EEA +ES+K GI P+VH+YTSLI +FF
Sbjct: 897 LINEVDDEQHVLSQYVYGSLVHGLLQKGQLEEALGRIESMKQAGIHPTVHVYTSLIGYFF 956
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
K KQ KALE FK MK+ GC+PT+VTYSA+I GY
Sbjct: 957 KVKQAGKALETFKEMKDSGCQPTIVTYSALIRGY 990
>gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus vulgaris]
Length = 1069
Score = 120 bits (300), Expect = 2e-25
Identities = 53/94 (56%), Positives = 74/94 (78%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
+I + G E + Q TCGS++HGLLRKGR++EA A++E++K GI+P++H+YTSLI HFF
Sbjct: 879 LITEVGEEKSIIDQLTCGSIVHGLLRKGRLQEALAKVEAMKQKGIAPTIHVYTSLIVHFF 938
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KEKQV KA+E F+ M++ G EP +VTYS +I GY
Sbjct: 939 KEKQVEKAIETFEEMQQSGYEPNIVTYSVLIRGY 972
>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Citrus sinensis]
Length = 1040
Score = 116 bits (291), Expect = 3e-24
Identities = 51/94 (54%), Positives = 76/94 (80%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
++++ E L ++ GSLIHGL+++G+IEEA A++E++K GI P+VH+YTS + HFF
Sbjct: 850 LLDEVKEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFF 909
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
+EKQV +ALEIF+ M++EGCEPTVVTY+A+I G+
Sbjct: 910 REKQVGRALEIFERMRQEGCEPTVVTYTALIQGF 943
>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
gi|557532087|gb|ESR43270.1| hypothetical protein
CICLE_v10010964mg [Citrus clementina]
Length = 1040
Score = 116 bits (291), Expect = 3e-24
Identities = 51/94 (54%), Positives = 76/94 (80%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
++++ E L ++ GSLIHGL+++G+IEEA A++E++K GI P+VH+YTS + HFF
Sbjct: 850 LLDEVKEERSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFF 909
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
+EKQV +ALEIF+ M++EGCEPTVVTY+A+I G+
Sbjct: 910 REKQVGRALEIFERMRQEGCEPTVVTYTALIQGF 943
>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 114 bits (286), Expect = 1e-23
Identities = 53/92 (57%), Positives = 71/92 (77%)
Frame = -1
Query: 277 EKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFFKE 98
E+ G E + Q T GS++HGLLRKGR+EEA A+++ +K GI+P++H++TSLI HFFKE
Sbjct: 846 EEVGEEKFIIDQLTFGSIVHGLLRKGRLEEALAKVDVMKQNGITPTIHVFTSLIVHFFKE 905
Query: 97 KQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KQV KA+E F+ M G EPT+VTYSA+I GY
Sbjct: 906 KQVEKAIETFEEMLHSGYEPTIVTYSALIRGY 937
>gb|EPS63838.1| hypothetical protein M569_10945, partial [Genlisea aurea]
Length = 913
Score = 112 bits (280), Expect = 5e-23
Identities = 52/95 (54%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEME-SIKNIGISPSVHIYTSLISHF 107
+I+KSG L+QYT GSLIHG LRKG++E+A A+M+ +K GI P+VH+YT+LI HF
Sbjct: 724 LIDKSGSVKAVLEQYTYGSLIHGFLRKGQLEKALAKMKYMMKQYGIPPTVHVYTALIIHF 783
Query: 106 FKEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KE+++ +A+E MK+EGC+PTVVT+SA++ GY
Sbjct: 784 IKEREINRAIETLDEMKKEGCQPTVVTFSALVCGY 818
>ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
gi|449501176|ref|XP_004161299.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g06400,
mitochondrial-like [Cucumis sativus]
Length = 1037
Score = 111 bits (278), Expect = 9e-23
Identities = 52/92 (56%), Positives = 67/92 (72%)
Frame = -1
Query: 277 EKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFFKE 98
E G E L Y GSL++GLL+ GR EEA A+M S+K +GI+P+VH+YTS I + FKE
Sbjct: 849 EVVGDERSKLDSYIYGSLVYGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKE 908
Query: 97 KQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KQ +ALEI M +EGCEP++ TYSAI+HGY
Sbjct: 909 KQTRRALEILAKMLQEGCEPSIATYSAIVHGY 940
>ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cicer arietinum]
Length = 1045
Score = 111 bits (277), Expect = 1e-22
Identities = 49/94 (52%), Positives = 72/94 (76%)
Frame = -1
Query: 283 MIEKSGPENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFF 104
+I+ GPE +++ T GS++HGLL KG++EEA A++ +K GI+P++H+YTSLI HFF
Sbjct: 855 LIDGVGPEKSIVEKLTYGSIVHGLLHKGKLEEALAKVHGMKQEGITPTIHVYTSLIVHFF 914
Query: 103 KEKQVCKALEIFKNMKEEGCEPTVVTYSAIIHGY 2
KEK++ KA+E + M++ G EP VVTYSA+I GY
Sbjct: 915 KEKKIEKAIETYDEMQKSGYEPNVVTYSALIRGY 948
>ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [Amborella trichopoda]
gi|548830738|gb|ERM93661.1| hypothetical protein
AMTR_s00004p00162290 [Amborella trichopoda]
Length = 961
Score = 110 bits (275), Expect = 2e-22
Identities = 49/84 (58%), Positives = 66/84 (78%)
Frame = -1
Query: 253 TLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFFKEKQVCKALE 74
TL QY GSL+HGLLR GR++EA + + G SP+VH+YTS + H+FKEKQ+ KALE
Sbjct: 781 TLDQYIYGSLVHGLLRAGRVDEALKMVGKMTLDGFSPTVHVYTSFLVHYFKEKQMEKALE 840
Query: 73 IFKNMKEEGCEPTVVTYSAIIHGY 2
IF+ M+E+GCEP+++TYSA+I GY
Sbjct: 841 IFRKMREDGCEPSIITYSALIRGY 864
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = -1
Query: 226 LIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFFKEKQVCKALEIFKNMKEEG 47
LI+G LR G I A + S+K +G PSV YT ++ H F+ + +++ MKE G
Sbjct: 324 LINGYLRIGEISVACVLLNSMKKLGFLPSVSTYTDIVQHLFRMNAYEEGCRLYEEMKESG 383
Query: 46 CEPTVVTYSAIIHGY 2
EP VV +A++ G+
Sbjct: 384 LEPDVVAMTALVAGH 398
>ref|XP_006286714.1| hypothetical protein CARUB_v10002874mg [Capsella rubella]
gi|482555420|gb|EOA19612.1| hypothetical protein
CARUB_v10002874mg [Capsella rubella]
Length = 1016
Score = 110 bits (275), Expect = 2e-22
Identities = 50/87 (57%), Positives = 69/87 (79%)
Frame = -1
Query: 262 ENHTLKQYTCGSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFFKEKQVCK 83
E L QYT GS++HG L++G+++EA A++ S+K GI PSVH+YTSLI HFFKEKQ+ K
Sbjct: 833 EKSLLDQYTYGSIVHGFLQRGQLQEALAKVNSMKEKGIKPSVHVYTSLIVHFFKEKQLEK 892
Query: 82 ALEIFKNMKEEGCEPTVVTYSAIIHGY 2
+E + M+EEGCEP+VVT++A+I GY
Sbjct: 893 VIETCQEMEEEGCEPSVVTFTAMICGY 919
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = -1
Query: 232 GSLIHGLLRKGRIEEAFAEMESIKNIGISPSVHIYTSLISHFFKEKQVCKALEIFKNMKE 53
G +I G LR+ + +A + E IKN G + V YT ++ H FK KQ K +F M E
Sbjct: 396 GIIISGYLRQNNVSKALEQFEVIKNSGKTLRVSTYTEIMQHLFKLKQFEKGCNLFSEMIE 455
Query: 52 EGCEPTVVTYSAIIHGY 2
G EP V +A++ GY
Sbjct: 456 NGIEPDSVAITAMVAGY 472