BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00031923
         (264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi...   102   5e-20
ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_006343635.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_004242986.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_003625900.1| Pentatricopeptide repeat-containing protein ...    92   6e-17
ref|XP_004290764.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containi...    90   4e-16
ref|XP_004494357.1| PREDICTED: pentatricopeptide repeat-containi...    89   6e-16
gb|EMJ00243.1| hypothetical protein PRUPE_ppa018221mg, partial [...    87   2e-15
ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Popu...    82   6e-14
gb|EOX95012.1| Pentatricopeptide repeat superfamily protein [The...    81   1e-13
gb|ESW35082.1| hypothetical protein PHAVU_001G205100g [Phaseolus...    78   1e-12
ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_006604717.1| PREDICTED: pentatricopeptide repeat-containi...    71   2e-10
ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_002303975.2| pentatricopeptide repeat-containing family p...    66   6e-09
ref|XP_006856166.1| hypothetical protein AMTR_s00059p00175950 [A...    65   7e-09
ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, p...    65   1e-08
ref|XP_006858224.1| hypothetical protein AMTR_s00062p00188560, p...    63   4e-08

>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 468

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/85 (55%), Positives = 62/85 (72%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI+AC+ LGLL+   LL+T ++ KPH FICN LIRAFSH+H      SIY+ MH NS+ P
Sbjct: 49  FITACQSLGLLDSALLLFTHHS-KPHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILP 107

Query: 83  NNYTFPFILKSLSALKSFKQGKSVH 9
           NN+TFPF+LKSL+  K   +G+ +H
Sbjct: 108 NNFTFPFLLKSLADFKGLSEGQCIH 132


>ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/85 (55%), Positives = 59/85 (69%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI+ C  L LL   FL +T + PKPH FICN LIRAFSHS      + +Y+ M++NS+SP
Sbjct: 50  FINTCHHLHLLGSAFLFFT-HIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISP 108

Query: 83  NNYTFPFILKSLSALKSFKQGKSVH 9
           NNYTFPF+LKSL+  K    G+SVH
Sbjct: 109 NNYTFPFVLKSLADFKDLVGGQSVH 133


>ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/85 (55%), Positives = 59/85 (69%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI+ C  L LL   FL +T + PKPH FICN LIRAFSHS      + +Y+ M++NS+SP
Sbjct: 50  FINTCHHLHLLGSAFLFFT-HIPKPHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISP 108

Query: 83  NNYTFPFILKSLSALKSFKQGKSVH 9
           NNYTFPF+LKSL+  K    G+SVH
Sbjct: 109 NNYTFPFVLKSLADFKDLVGGQSVH 133


>ref|XP_006343635.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Solanum tuberosum]
          Length = 476

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/88 (57%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHA---HRFSISIYSQMHKNS 93
           FIS  K LGLLN  + LYT    KPH FICN LI+  SHS      + SIS+Y  MHK  
Sbjct: 54  FISVSKSLGLLNSAYTLYTKLIKKPHIFICNTLIQECSHSEIPVLKQNSISMYVHMHKEG 113

Query: 92  VSPNNYTFPFILKSLSALKSFKQGKSVH 9
           + PNNYT+PF+LKSLS LK  K GKSVH
Sbjct: 114 IFPNNYTYPFVLKSLSDLKELKLGKSVH 141


>ref|XP_004242986.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Solanum lycopersicum]
          Length = 476

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/88 (57%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHA---HRFSISIYSQMHKNS 93
           FIS  K LGL N  + LYT    KPH FICN LI+  SHS      + SIS+Y  MHK S
Sbjct: 54  FISVSKSLGLFNSAYTLYTKLIKKPHIFICNTLIQECSHSEIPVLKQNSISMYVHMHKES 113

Query: 92  VSPNNYTFPFILKSLSALKSFKQGKSVH 9
           + PNNYT+PF+LKSLS LK  K GKSVH
Sbjct: 114 IFPNNYTYPFVLKSLSDLKELKLGKSVH 141


>ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500915|gb|AES82118.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 467

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 46/84 (54%), Positives = 56/84 (66%)
 Frame = -2

Query: 260 ISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSPN 81
           I+A +   LLNY   L+T   PKPH FI N LIRAFSHSH     +S+YS MHKNS+ PN
Sbjct: 49  ITASQSHNLLNYVSPLFTHLIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPN 108

Query: 80  NYTFPFILKSLSALKSFKQGKSVH 9
           N+TFPF+ KSLS    F Q + V+
Sbjct: 109 NFTFPFLFKSLSDSHDFVQSQCVY 132


>ref|XP_004290764.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Fragaria vesca subsp. vesca]
          Length = 466

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/85 (49%), Positives = 54/85 (63%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FISA K L LL+   L      P PH F CN LIRAFSHSH     +SIY+ M + S++P
Sbjct: 46  FISASKTLNLLHLAHLHILTQLPTPHVFTCNSLIRAFSHSHIPHIPLSIYTHMTRTSIAP 105

Query: 83  NNYTFPFILKSLSALKSFKQGKSVH 9
           NNYTFP + KSL+  +  +QG+ +H
Sbjct: 106 NNYTFPILFKSLADFRDLRQGQCLH 130


>ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Citrus sinensis]
          Length = 466

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI+AC+ L LLN   LL+      PH F CN LI+AFSHS       SIY+ M +N V P
Sbjct: 51  FITACQSLNLLNTAHLLFH-QLHVPHVFACNSLIKAFSHSQIPHIPYSIYTHMLRNYVLP 109

Query: 83  NNYTFPFILKSLSALKSFKQGKSVH 9
           NNYTFPF+LKS S    FKQG+++H
Sbjct: 110 NNYTFPFVLKSSSDFMEFKQGQAIH 134


>ref|XP_004494357.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cicer arietinum]
          Length = 468

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -2

Query: 263 FISACKFLGLLN--YPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSV 90
           FI+A +   LLN   P    T  +PKPH FI N LIRAFSHSH     +SIY+ MHKNS+
Sbjct: 47  FINASQSHNLLNTVLPLFFTTSLSPKPHIFIFNSLIRAFSHSHIPHIPLSIYTHMHKNSI 106

Query: 89  SPNNYTFPFILKSLSALKSFKQGKSVH 9
            PNN+TFPF+ KSLS    F Q + V+
Sbjct: 107 FPNNFTFPFLFKSLSDSHHFIQAQCVY 133


>gb|EMJ00243.1| hypothetical protein PRUPE_ppa018221mg, partial [Prunus persica]
          Length = 372

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
 Frame = -2

Query: 218 LLYTINTPKPHTFICNQLIRAFSHSHA------HRFSISIYSQMHKNSVSPNNYTFPFIL 57
           L +    PKPH FICN LIRAFSHSH       +   +SIY  MHK+S+ PNN+TFPF+L
Sbjct: 2   LHFLTQLPKPHVFICNSLIRAFSHSHTPHNQIHNHIPLSIYVHMHKSSILPNNFTFPFLL 61

Query: 56  KSLSALKSFKQGKSVH 9
           KSL+    FKQG+ +H
Sbjct: 62  KSLADSHDFKQGQCLH 77


>ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Populus trichocarpa]
           gi|550324072|gb|EEE98668.2| hypothetical protein
           POPTR_0014s12660g [Populus trichocarpa]
          Length = 410

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/86 (47%), Positives = 52/86 (60%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI+A +   LL     L+  +  +PH FICN LIRAFS  H      SIY  MH NS+ P
Sbjct: 49  FITASQNFSLLRSSLPLFFTHLHRPHVFICNTLIRAFSRIHDPHIPYSIYIHMHYNSILP 108

Query: 83  NNYTFPFILKSLSALKSFKQGKSVHA 6
           NNYTFPF+ KSLS  + + + + VHA
Sbjct: 109 NNYTFPFLFKSLSDCRDYLKCQCVHA 134


>gb|EOX95012.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 456

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 40/84 (47%), Positives = 51/84 (60%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI++C   GLL++   L  ++ P  H FI N LIRAFSHS       S+Y+ M   SV P
Sbjct: 33  FINSCNSSGLLSHAHTLLFLSKPPAHVFIYNSLIRAFSHSKTPHLPFSLYTHMRNASVMP 92

Query: 83  NNYTFPFILKSLSALKSFKQGKSV 12
           NNYTFPF+LKSLS      +G+ V
Sbjct: 93  NNYTFPFLLKSLSDFHQLLKGQMV 116


>gb|ESW35082.1| hypothetical protein PHAVU_001G205100g [Phaseolus vulgaris]
          Length = 463

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 39/85 (45%), Positives = 49/85 (57%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI AC   GL+N    L+T   P PH +I N LIR FS S      + IYS M +N+V P
Sbjct: 44  FIGACYSHGLINSALRLFTTLPPSPHVYIFNTLIRVFSQSRIPHTPLLIYSHMRRNNVLP 103

Query: 83  NNYTFPFILKSLSALKSFKQGKSVH 9
           NN+TFP + KSLS  +   Q + VH
Sbjct: 104 NNFTFPPLFKSLSDARHLTQARCVH 128


>ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 676

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/87 (36%), Positives = 55/87 (63%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI+ C  LGL++Y  LL+    P+P++F+ N LIR F  + A ++++  + QM  N+V P
Sbjct: 49  FITHCASLGLMSYAALLFD-QMPEPNSFVWNTLIRGFQQNRAPKYTLYYFDQMRANNVQP 107

Query: 83  NNYTFPFILKSLSALKSFKQGKSVHAQ 3
           + +T+PF +++ S L    +G S+H Q
Sbjct: 108 DRFTYPFAIRACSGLLECAKGVSLHGQ 134


>ref|XP_006604717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Glycine max]
          Length = 464

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/85 (42%), Positives = 49/85 (57%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI AC+  GLLN   +L+T   P PH +  N LIR FS S      + IY+ M + S+ P
Sbjct: 45  FIGACQSHGLLNTALVLFTTLLPHPHVYTFNTLIRVFSQSLTPHTPLFIYTHMRRYSLLP 104

Query: 83  NNYTFPFILKSLSALKSFKQGKSVH 9
           NN+TFP + KSLS  +   Q + V+
Sbjct: 105 NNFTFPPLFKSLSDTRQVTQAQCVY 129


>ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 680

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/87 (34%), Positives = 54/87 (62%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           FI+ C  LGL++Y   L+     +P++F+ N LIR F  +H+ ++++  + QM  N+  P
Sbjct: 53  FITHCASLGLMSYAAQLFD-QMSEPNSFVWNTLIRGFQQNHSPKYTLYYFDQMRVNNAQP 111

Query: 83  NNYTFPFILKSLSALKSFKQGKSVHAQ 3
           + +T+PF +++ S L  F +G S+H Q
Sbjct: 112 DRFTYPFTIRACSGLLEFAKGASLHGQ 138


>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343649|gb|EEE78954.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 543

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAH-RFSISIYSQMHKNSVS 87
           FI AC  LG  +Y + L+T  T  P  ++ N +I+A S S  H + SI +Y+ +    + 
Sbjct: 51  FIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIFLYNNIQLAGLR 110

Query: 86  PNNYTFPFILKSLSALKSFKQGKSVHAQ 3
           P++Y+FPF LK+++   S + G+ +H+Q
Sbjct: 111 PDSYSFPFALKAVTRFSSIQTGRQLHSQ 138


>ref|XP_006856166.1| hypothetical protein AMTR_s00059p00175950 [Amborella trichopoda]
           gi|548860025|gb|ERN17633.1| hypothetical protein
           AMTR_s00059p00175950 [Amborella trichopoda]
          Length = 236

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/78 (41%), Positives = 50/78 (64%)
 Frame = -2

Query: 242 LGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSPNNYTFPF 63
           LG L+Y FL++     +P+ F+ N +IR FS+S   + +  +Y QM    + PNN+TFPF
Sbjct: 35  LGDLDYGFLVFN-QIQEPNRFMWNTIIRGFSNSPYPKEAFFLYKQMLNQGLFPNNFTFPF 93

Query: 62  ILKSLSALKSFKQGKSVH 9
           +LK+ + L S ++GK VH
Sbjct: 94  VLKACTQLSSIREGKIVH 111


>ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, partial [Amborella
           trichopoda] gi|548831291|gb|ERM94099.1| hypothetical
           protein AMTR_s00010p00121230, partial [Amborella
           trichopoda]
          Length = 135

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/76 (39%), Positives = 49/76 (64%)
 Frame = -2

Query: 233 LNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSPNNYTFPFILK 54
           ++Y  LL+     KP  FI N LIR++  +H    ++S+Y QMH ++V P+ +TFPF+LK
Sbjct: 1   MDYAHLLFQ-QMHKPRPFIWNTLIRSYYKTHLFSHALSLYDQMHVSNVRPDEFTFPFVLK 59

Query: 53  SLSALKSFKQGKSVHA 6
           + + L + ++G  VHA
Sbjct: 60  ACAGLIAQREGSQVHA 75


>ref|XP_006858224.1| hypothetical protein AMTR_s00062p00188560, partial [Amborella
           trichopoda] gi|548862327|gb|ERN19691.1| hypothetical
           protein AMTR_s00062p00188560, partial [Amborella
           trichopoda]
          Length = 150

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 27/87 (31%), Positives = 54/87 (62%)
 Frame = -2

Query: 263 FISACKFLGLLNYPFLLYTINTPKPHTFICNQLIRAFSHSHAHRFSISIYSQMHKNSVSP 84
           ++SAC   G ++Y   ++  +  KP+ F+ N +I+ F H H+++ +IS+Y ++  +SVS 
Sbjct: 16  YVSACSSTGSMDYAISVFA-HLQKPNIFVWNSMIKGFVHCHSYQEAISMYKKLLVSSVSA 74

Query: 83  NNYTFPFILKSLSALKSFKQGKSVHAQ 3
            +YTF  ++K+ + +     G+S+H Q
Sbjct: 75  TSYTFSSVIKACTQVLGLSLGESIHGQ 101