BLASTX nr result

ID: Catharanthus23_contig00031890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00031890
         (227 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251078.1| PREDICTED: F-box protein At2g27310-like [Sol...    66   4e-09
gb|EMJ09898.1| hypothetical protein PRUPE_ppa023494mg, partial [...    65   9e-09
ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    61   1e-07
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...    61   2e-07
ref|XP_004293121.1| PREDICTED: F-box protein At2g27310-like [Fra...    60   3e-07
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...    60   3e-07
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...    59   9e-07
ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-...    58   1e-06
ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-...    58   1e-06
ref|XP_002313604.2| hypothetical protein POPTR_0009s16231g [Popu...    56   6e-06
ref|XP_006430130.1| hypothetical protein CICLE_v10012142mg [Citr...    55   8e-06

>ref|XP_004251078.1| PREDICTED: F-box protein At2g27310-like [Solanum lycopersicum]
          Length = 349

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   PVEI-RQQLKGEINIHFATIIGDGIDGRFVKCGVDVTCERVKDDDVLNITEIGMQVEDME 178
           PV + R  L GE+ + ++T++G G     V+CG+ VTCE  K+   L++ E+ MQ+EDM+
Sbjct: 206 PVSVQRHWLTGELKVRYSTVMGSGAGEGLVQCGIVVTCEG-KEGGELHVREVSMQIEDMD 264

Query: 179 GNILNGNDSLEIFEE 223
           G +L G DSL I +E
Sbjct: 265 GKVLCGKDSLVILQE 279


>gb|EMJ09898.1| hypothetical protein PRUPE_ppa023494mg, partial [Prunus persica]
          Length = 322

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/71 (49%), Positives = 45/71 (63%)
 Frame = +2

Query: 14  RQQLKGEINIHFATIIGDGIDGRFVKCGVDVTCERVKDDDVLNITEIGMQVEDMEGNILN 193
           R  L GEI + FATI+     G FV+CG+ VTC   +  + L++ E+ MQVE MEGN LN
Sbjct: 208 RHWLTGEIQLRFATILAGEKRGEFVQCGMVVTCNWSEGGE-LHVREVSMQVEGMEGNHLN 266

Query: 194 GNDSLEIFEEA 226
           G +SL I E A
Sbjct: 267 GKESLVILERA 277


>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   PVEIRQQ-LKGEINIHFATIIGDG--IDGRFVKCGVDVTCERVKDDDVLNITEIGMQVED 172
           PV +++  L GE+ + +AT++G    +    V+CG+ VTC   K+   + + E+ +QVED
Sbjct: 199 PVSVKRHWLTGEVQVRYATVVGGDRTVGSEVVQCGIVVTCAG-KEGGEMQVREVNLQVED 257

Query: 173 MEGNILNGNDSLEIFEEA 226
           MEG  LNG +SL I +EA
Sbjct: 258 MEGRHLNGKESLVILQEA 275


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
           gi|566167687|ref|XP_006384770.1| F-box family protein
           [Populus trichocarpa] gi|550341538|gb|ERP62567.1| F-box
           family protein [Populus trichocarpa]
          Length = 342

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   PVEI-RQQLKGEINIHFATII-GDGIDGRFVKCGVDVTCERVKDDDVLNITEIGMQVEDM 175
           PV + R  L GE+ + FATI+ GDG +  FV+CGV V C + K+   + + EI M +EDM
Sbjct: 205 PVSVQRHWLTGEVVVKFATIMAGDGGEKEFVECGVMVCCGK-KEGGEMEVREISMGMEDM 263

Query: 176 EGNILNGNDSLEIFEEA 226
           EG  L G +SL + +EA
Sbjct: 264 EGRNLTGKESLVVIQEA 280


>ref|XP_004293121.1| PREDICTED: F-box protein At2g27310-like [Fragaria vesca subsp.
           vesca]
          Length = 336

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   PVEI-RQQLKGEINIHFATIIGDGIDGRFVKCGVDVTCERVKDDDVLNITEIGMQVEDME 178
           PV + R  L GE+ + FA I+     G FV+CG+ +TC+   D   L++ E+ MQ+E ME
Sbjct: 199 PVSVTRHWLTGEVQLRFAMIMPGNRRGEFVQCGMVLTCKG-SDGGKLHVREVSMQMEAME 257

Query: 179 GNILNGNDSLEIFEEA 226
           GN LNG +SL I + A
Sbjct: 258 GNHLNGKESLVILQGA 273


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
 Frame = +2

Query: 5   VEIRQQ-LKGEINIHFATIIGD--GIDGRFVKCGVDVTCERVKDDDVLNITEIGMQVEDM 175
           V++ Q  L GE+++ F T++G   G    +VKCG+ VTC   +  + L + E+ +QVEDM
Sbjct: 216 VKVEQHWLSGEVHVEFGTVLGGEKGTAAEWVKCGIAVTCGGWEGGN-LQVREVNLQVEDM 274

Query: 176 EGNILNGNDSLEIFEEA 226
           +G  L+G DSL I E A
Sbjct: 275 DGTFLDGKDSLVILERA 291


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
 Frame = +2

Query: 5   VEIRQQ-LKGEINIHFATIIGD--GIDGRFVKCGVDVTCERVKDDDVLNITEIGMQVEDM 175
           V++ Q  L GE+++ F T++G   G    +VKCG+ VTC   +  + L + E+ +QVEDM
Sbjct: 216 VKVEQHWLSGEVHVEFGTVLGGEKGTAAEWVKCGIAVTCGGWEGGN-LQVREVNLQVEDM 274

Query: 176 EGNILNGNDSLEIFEEA 226
           +G  L+G +SL I E A
Sbjct: 275 DGTFLDGKESLVILERA 291


>ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-like, partial [Cucumis
           sativus]
          Length = 320

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
 Frame = +2

Query: 2   PVEIRQQ-LKGEINIHFATIIGD----GIDGRFVKCGVDVTC-ERVKDDDVLNITEIGMQ 163
           PV++R+  L GEI + + T++G     G     V+C V V+C E+ ++   +++TE+ MQ
Sbjct: 198 PVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEMSVTEVSMQ 257

Query: 164 VEDMEGNILNGNDSLEIFEEA 226
           + DMEG  LNG DSL I +EA
Sbjct: 258 MLDMEGKHLNGKDSLGILKEA 278


>ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 321

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
 Frame = +2

Query: 2   PVEIRQQ-LKGEINIHFATIIGD----GIDGRFVKCGVDVTC-ERVKDDDVLNITEIGMQ 163
           PV++R+  L GEI + + T++G     G     V+C V V+C E+ ++   +++TE+ MQ
Sbjct: 198 PVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEMSVTEVSMQ 257

Query: 164 VEDMEGNILNGNDSLEIFEEA 226
           + DMEG  LNG DSL I +EA
Sbjct: 258 MLDMEGKHLNGKDSLGILKEA 278


>ref|XP_002313604.2| hypothetical protein POPTR_0009s16231g [Populus trichocarpa]
           gi|550331855|gb|EEE87559.2| hypothetical protein
           POPTR_0009s16231g [Populus trichocarpa]
          Length = 341

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   PVEI-RQQLKGEINIHFATII-GDGIDGRFVKCGVDVTCERVKDDDVLNITEIGMQVEDM 175
           PV + R  L GE+ + F+ I+ GDG +  +V+CGV V C   K+   + + E+ M +EDM
Sbjct: 207 PVSVQRHWLTGEVVVKFSNIMAGDGREKEYVECGVMVCCGE-KEGGEVEVREVSMVMEDM 265

Query: 176 EGNILNGNDSLEIFEEA 226
           EG  L G D L I +EA
Sbjct: 266 EGKNLTGKDGLVILQEA 282


>ref|XP_006430130.1| hypothetical protein CICLE_v10012142mg [Citrus clementina]
           gi|557532187|gb|ESR43370.1| hypothetical protein
           CICLE_v10012142mg [Citrus clementina]
          Length = 338

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
 Frame = +2

Query: 2   PVEI-RQQLKGEINIHFATIIGDGIDG---RFVKCGVDVTCERVKDDDVLNITEIGMQVE 169
           PV + R  L GE ++ F+ ++  G  G    FV+CG+ VTC   +  + +++ E+ +QVE
Sbjct: 199 PVTVQRHWLSGEAHVRFSLVLSGGDKGSSSEFVQCGIVVTCGGSQGGE-MHVREVNLQVE 257

Query: 170 DMEGNILNGNDSLEIFE 220
           DM+G  LNG DSL I +
Sbjct: 258 DMDGTNLNGKDSLVILQ 274


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