BLASTX nr result
ID: Catharanthus23_contig00031872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031872
(375 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345164.1| PREDICTED: DNA annealing helicase and endonu... 80 3e-13
ref|XP_004236486.1| PREDICTED: DNA annealing helicase and endonu... 79 8e-13
ref|XP_006477618.1| PREDICTED: DNA annealing helicase and endonu... 78 1e-12
ref|XP_002318592.1| hypothetical protein POPTR_0012s06860g [Popu... 78 1e-12
gb|EOY21979.1| SNF2 domain-containing protein / helicase domain-... 77 2e-12
gb|EOY21978.1| SNF2 domain-containing protein / helicase domain-... 77 2e-12
ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin... 76 5e-12
ref|XP_004138311.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin... 76 5e-12
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co... 75 1e-11
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu... 74 2e-11
gb|EMJ10016.1| hypothetical protein PRUPE_ppa024990mg [Prunus pe... 73 4e-11
ref|XP_004499416.1| PREDICTED: DNA annealing helicase and endonu... 72 1e-10
ref|XP_006286920.1| hypothetical protein CARUB_v10000064mg, part... 72 1e-10
ref|XP_004301127.1| PREDICTED: uncharacterized protein LOC101303... 70 3e-10
gb|EXC11026.1| Zinc finger Ran-binding domain-containing protein... 69 6e-10
ref|XP_004958210.1| PREDICTED: DNA annealing helicase and endonu... 69 6e-10
dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana] 68 1e-09
ref|NP_196398.2| SNF2 and helicase domain-containing protein [Ar... 68 1e-09
gb|ESW29647.1| hypothetical protein PHAVU_002G087300g [Phaseolus... 67 2e-09
gb|ESW29645.1| hypothetical protein PHAVU_002G087300g [Phaseolus... 67 2e-09
>ref|XP_006345164.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Solanum tuberosum]
Length = 1251
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 12/93 (12%)
Frame = -1
Query: 255 SSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVA------------TRSSMLVTSLRFE 112
SS EV++ + + + +D + ++ D K A T SS+ V SLRFE
Sbjct: 798 SSCRAEVSDDDFSSSHCIDVNEAKEQDLQDKGKGASPELEVNGEILLTSSSIQVESLRFE 857
Query: 111 VSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEI 13
VS+YTGR+HLYSCIP IDSRP+PLF +FRPE++
Sbjct: 858 VSQYTGRIHLYSCIPGIDSRPKPLFKNFRPEDV 890
>ref|XP_004236486.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Solanum lycopersicum]
Length = 1290
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = -1
Query: 156 VATRSSMLVTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEI 13
+ T SS+ V SLRFEVS+YTGR+HLYSCIP IDSRP+PLF +FRPEE+
Sbjct: 876 LVTNSSIQVESLRFEVSQYTGRIHLYSCIPGIDSRPKPLFKNFRPEEV 923
>ref|XP_006477618.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Citrus sinensis]
Length = 1212
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/63 (57%), Positives = 47/63 (74%)
Frame = -1
Query: 195 TDPNAGEIIDPNKVATRSSMLVTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEE 16
T + +++ P + SS V SLRFEVS+YTGR+HLYSC+P DSRPRPLF SFRPEE
Sbjct: 815 TKLDVAKLLLPTEADECSSDQVNSLRFEVSQYTGRIHLYSCVPGTDSRPRPLFESFRPEE 874
Query: 15 IES 7
+++
Sbjct: 875 LDN 877
>ref|XP_002318592.1| hypothetical protein POPTR_0012s06860g [Populus trichocarpa]
gi|222859265|gb|EEE96812.1| hypothetical protein
POPTR_0012s06860g [Populus trichocarpa]
Length = 726
Score = 77.8 bits (190), Expect = 1e-12
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Frame = -1
Query: 273 RAAGRISS-QNLEVTEGNI-----NKVNMVDETDPNAGEIIDPNKVATRSSMLVTSLRFE 112
R++ R+SS ++ E EGN NK+ V T+ N E+ N+ S V SLRFE
Sbjct: 292 RSSSRVSSSESSEGHEGNDQSEKENKL-CVQTTETNDSELAQQNEADECWSNEVYSLRFE 350
Query: 111 VSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIES 7
VSKYTGR+HLYSCI DSRP+PL+ +F+PEE+ES
Sbjct: 351 VSKYTGRIHLYSCILGKDSRPQPLYENFQPEELES 385
>gb|EOY21979.1| SNF2 domain-containing protein / helicase domain-containing protein
/ HNH endonuclease domain-containing protein, putative
isoform 2 [Theobroma cacao]
Length = 1129
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 132 VTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIESE 4
V SLRFEVS+YTGR+HLYSCIP D RPRPLF +FRPEEIESE
Sbjct: 832 VNSLRFEVSQYTGRIHLYSCIPGTDLRPRPLFQNFRPEEIESE 874
>gb|EOY21978.1| SNF2 domain-containing protein / helicase domain-containing protein
/ HNH endonuclease domain-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 1217
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 132 VTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIESE 4
V SLRFEVS+YTGR+HLYSCIP D RPRPLF +FRPEEIESE
Sbjct: 832 VNSLRFEVSQYTGRIHLYSCIPGTDLRPRPLFQNFRPEEIESE 874
>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
endonuclease ZRANB3-like [Cucumis sativus]
Length = 1241
Score = 75.9 bits (185), Expect = 5e-12
Identities = 46/99 (46%), Positives = 59/99 (59%)
Frame = -1
Query: 306 PYGGSSPEATQRAAGRISSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVATRSSMLVT 127
P SSP+ ++ S + E + +MV +P+ II+P K S V
Sbjct: 805 PERASSPQMDEQCG---ESDQAQKEENLGSGASMVHNGEPHL--IIEPEK---NSLNHVQ 856
Query: 126 SLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIE 10
LRFEVS+YTGRVHLY+CIP ID RPRPLF +FRPEE+E
Sbjct: 857 ILRFEVSQYTGRVHLYACIPGIDLRPRPLFLNFRPEEVE 895
>ref|XP_004138311.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
endonuclease ZRANB3-like [Cucumis sativus]
Length = 1211
Score = 75.9 bits (185), Expect = 5e-12
Identities = 46/99 (46%), Positives = 59/99 (59%)
Frame = -1
Query: 306 PYGGSSPEATQRAAGRISSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVATRSSMLVT 127
P SSP+ ++ S + E + +MV +P+ II+P K S V
Sbjct: 775 PERASSPQMDEQCG---ESDQAQKEENLGSGASMVHNGEPHL--IIEPEK---NSLNHVQ 826
Query: 126 SLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIE 10
LRFEVS+YTGRVHLY+CIP ID RPRPLF +FRPEE+E
Sbjct: 827 ILRFEVSQYTGRVHLYACIPGIDLRPRPLFLNFRPEEVE 865
>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
[Vitis vinifera]
Length = 1280
Score = 74.7 bits (182), Expect = 1e-11
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Frame = -1
Query: 264 GRISSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVATRSSM------LVTSLRFEVSK 103
GR+S L + +K++ D P ++D + + M V LRF+VS+
Sbjct: 830 GRVSFCKLSRQSEDEDKMHKADNIFPETS-LVDDGEPVQKIDMGESYPNQVDFLRFQVSQ 888
Query: 102 YTGRVHLYSCIPEIDSRPRPLFHSFRPEEIE 10
YTGR+HLYSCIP IDSRPRPLF +FRPEE++
Sbjct: 889 YTGRIHLYSCIPGIDSRPRPLFENFRPEELD 919
>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
gi|223546303|gb|EEF47805.1| ATP binding protein, putative
[Ricinus communis]
Length = 1229
Score = 74.3 bits (181), Expect = 2e-11
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Frame = -1
Query: 285 EATQRAAGRISSQNLEVTEGNINKV----NMVDETDPNAGEIIDPNKVATRS-SMLVTSL 121
E+ + G ISS L+ G+ +++ N + +T + A + S V SL
Sbjct: 789 ESESNSDGGISSSKLDKGNGSEHEIEKEQNPLSQTKETYNHVPALGNEADETFSNQVYSL 848
Query: 120 RFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIES 7
RFEVSKYTGR+HLYSCI D RP+PLF +FRPEEIES
Sbjct: 849 RFEVSKYTGRIHLYSCILGTDPRPQPLFENFRPEEIES 886
>gb|EMJ10016.1| hypothetical protein PRUPE_ppa024990mg [Prunus persica]
Length = 1050
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = -1
Query: 195 TDPNAGEIIDPNKVATRSSMLVTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEE 16
T N GE + P + S + +LRFEVS+YTGR+HLYSCI DSRPRP+F +FRPEE
Sbjct: 774 TKLNDGEPVQP--LEAEESSTLDALRFEVSQYTGRIHLYSCISGEDSRPRPMFENFRPEE 831
Query: 15 IES 7
+E+
Sbjct: 832 LEA 834
>ref|XP_004499416.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Cicer arietinum]
Length = 1146
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/84 (44%), Positives = 48/84 (57%)
Frame = -1
Query: 261 RISSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVATRSSMLVTSLRFEVSKYTGRVHL 82
R S ++ E + I TD G+ I P + V SLRFEVS YTGR+HL
Sbjct: 732 RCSEESFEDNDEVIEDKESTSTTDAVNGQPIHPVETEGDCPNQVNSLRFEVSPYTGRIHL 791
Query: 81 YSCIPEIDSRPRPLFHSFRPEEIE 10
Y+C P D RP+PL+ SFRPE++E
Sbjct: 792 YTCNPGTDVRPQPLYESFRPEDLE 815
>ref|XP_006286920.1| hypothetical protein CARUB_v10000064mg, partial [Capsella rubella]
gi|482555626|gb|EOA19818.1| hypothetical protein
CARUB_v10000064mg, partial [Capsella rubella]
Length = 1207
Score = 71.6 bits (174), Expect = 1e-10
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = -1
Query: 297 GSSPEATQRAAGRISSQNLEV-TEGNINKVNMVDETDPNAGEIIDPNKVATRSSMLVTSL 121
GSS E R++G ISS L+ + N N++ + G D N + LV SL
Sbjct: 784 GSSSE--MRSSGTISSPMLDQENQENFQPKNLIADHGLVNGN--DSNSIFP----LVDSL 835
Query: 120 RFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIES 7
RFEVS TGR+HLYSCIP D RPRP F SFRPE+IE+
Sbjct: 836 RFEVSPNTGRIHLYSCIPGKDPRPRPHFQSFRPEDIEA 873
>ref|XP_004301127.1| PREDICTED: uncharacterized protein LOC101303335 [Fragaria vesca
subsp. vesca]
Length = 1231
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Frame = -1
Query: 294 SSPEATQRAAGRISSQNLEVT-EGNINKVNMVDETD----PNAGEIIDPNKVATRSS--- 139
SS + ++ GR+ ++L+ E IN D P G + +P +
Sbjct: 772 SSCKFSKSGEGRVGKESLDKKQEDGINSQTSKGHDDGSVLPIKGHVDEPVQQIEAGEGGI 831
Query: 138 MLVTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIES 7
V +LRFEVS+YTGR+HLYSCI D+RPRPLF +FRPEE++S
Sbjct: 832 NQVDALRFEVSQYTGRIHLYSCISGEDARPRPLFENFRPEELQS 875
>gb|EXC11026.1| Zinc finger Ran-binding domain-containing protein 3 [Morus
notabilis]
Length = 972
Score = 68.9 bits (167), Expect = 6e-10
Identities = 42/86 (48%), Positives = 50/86 (58%)
Frame = -1
Query: 267 AGRISSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVATRSSMLVTSLRFEVSKYTGRV 88
AG+ S L+ EGNI M + A E S V SLRFEVS+YTGR+
Sbjct: 681 AGKESLSKLD--EGNIFSPQMEGDETTEAFECC---------SNPVDSLRFEVSQYTGRI 729
Query: 87 HLYSCIPEIDSRPRPLFHSFRPEEIE 10
HLYSCI D+RPRPLF +FR EE+E
Sbjct: 730 HLYSCISGTDTRPRPLFENFRAEELE 755
>ref|XP_004958210.1| PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like
[Setaria italica]
Length = 1209
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = -1
Query: 132 VTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIES 7
V SLRFEVS++TGR+HLYSC+P DSRP+PLF +F+PEE+ S
Sbjct: 844 VESLRFEVSRHTGRIHLYSCVPGHDSRPKPLFENFQPEELNS 885
>dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana]
Length = 1178
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = -1
Query: 135 LVTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIES 7
L+ SLRFEVS+ TGR+HLYSCIP D RPRP F +FRPEEIE+
Sbjct: 805 LIDSLRFEVSQNTGRIHLYSCIPGKDPRPRPHFQNFRPEEIEA 847
>ref|NP_196398.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
gi|332003824|gb|AED91207.1| SNF2 and helicase
domain-containing protein [Arabidopsis thaliana]
Length = 1190
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = -1
Query: 135 LVTSLRFEVSKYTGRVHLYSCIPEIDSRPRPLFHSFRPEEIES 7
L+ SLRFEVS+ TGR+HLYSCIP D RPRP F +FRPEEIE+
Sbjct: 817 LIDSLRFEVSQNTGRIHLYSCIPGKDPRPRPHFQNFRPEEIEA 859
>gb|ESW29647.1| hypothetical protein PHAVU_002G087300g [Phaseolus vulgaris]
Length = 1164
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = -1
Query: 261 RISSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVATRSSMLVTSLRFEVSKYTGRVHL 82
R + ++ E T ++ V+ + D + ++++ + + S V LRFEVS YTGR+HL
Sbjct: 747 RYTGKSFEDTNPDMKCVSTTEADDNQSVQLVEAD---SHCSNQVDFLRFEVSPYTGRIHL 803
Query: 81 YSCIPEIDSRPRPLFHSFRPEEIE 10
Y+CI D RP+PL+ +FRPEE+E
Sbjct: 804 YTCILGTDKRPQPLYENFRPEELE 827
>gb|ESW29645.1| hypothetical protein PHAVU_002G087300g [Phaseolus vulgaris]
Length = 1159
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = -1
Query: 261 RISSQNLEVTEGNINKVNMVDETDPNAGEIIDPNKVATRSSMLVTSLRFEVSKYTGRVHL 82
R + ++ E T ++ V+ + D + ++++ + + S V LRFEVS YTGR+HL
Sbjct: 747 RYTGKSFEDTNPDMKCVSTTEADDNQSVQLVEAD---SHCSNQVDFLRFEVSPYTGRIHL 803
Query: 81 YSCIPEIDSRPRPLFHSFRPEEIE 10
Y+CI D RP+PL+ +FRPEE+E
Sbjct: 804 YTCILGTDKRPQPLYENFRPEELE 827