BLASTX nr result

ID: Catharanthus23_contig00031803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00031803
         (666 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    75   2e-11
ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624...    60   1e-09
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...    64   3e-08
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    64   3e-08
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...    62   2e-07
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    59   1e-06
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    59   1e-06
gb|EPS69771.1| hypothetical protein M569_04993 [Genlisea aurea]        59   2e-06
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    47   3e-06
gb|EPS58350.1| hypothetical protein M569_16465 [Genlisea aurea]        57   4e-06

>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
 Frame = +2

Query: 8   DECENYTKLPSSNDTQLLALIVNERVERKCVSIFNGIE*CTFWHC*ISSDSIEPMLKLKT 187
           DE   Y ++P        A IV  R + K      G++  TF     S  +++P+  L  
Sbjct: 46  DELNQYIEIPECTCGAAQA-IVKSREDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGK 104

Query: 188 ILPQICKKEQH*NLARMTEHDGDGAALAVVGIHRSSSTSNLFCSHCHRSGHDISGSFQLI 367
           I   + ++E+H ++AR  +        A        +  +  C+HC ++GHD++  FQL 
Sbjct: 105 IYAMVTQEERHRSMARGADRAEITVFAAXTEKPGGQTNKSGSCTHCGKTGHDVADCFQLK 164

Query: 368 GYPDWWP*SSNPNTDRAILTGRDRGM---QVAGKGRTRRVAGTLQYGRAAAGKGRTQLQQ 538
           GYPDWWP        R +  GR RG      AG+G T   +G + Y  A A +  TQ + 
Sbjct: 165 GYPDWWP-------TRQMGRGRGRGRGRNSYAGRGAT---SGRVHYXNAVA-EADTQEKG 213

Query: 539 QTVGRAID 562
           Q VG  ++
Sbjct: 214 QCVGHDVE 221


>ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624694 isoform X1 [Citrus
           sinensis] gi|568852764|ref|XP_006480041.1| PREDICTED:
           uncharacterized protein LOC102624694 isoform X2 [Citrus
           sinensis] gi|568852766|ref|XP_006480042.1| PREDICTED:
           uncharacterized protein LOC102624694 isoform X3 [Citrus
           sinensis]
          Length = 320

 Score = 60.5 bits (145), Expect(2) = 1e-09
 Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
 Frame = +2

Query: 158 SIEPMLKLKTILPQICKKEQH*NLARMTEHDGDGAALAVVGIHRSS----STSNLFCSHC 325
           S +P+  L      + ++E+   + R  E  G+  A AV G  +        S++ C HC
Sbjct: 144 STDPLPPLNRAYSLVVQEERVQTITRGKEGRGEPVAFAVQGGVKGQIEIREKSSVICKHC 203

Query: 326 HRSGHDISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGMQVAGKGRTRRVAGTLQYGRA 505
            ++GHD    FQLIGYP+WW        DR+   GR      AG+G+     G  + G A
Sbjct: 204 RKTGHDADSCFQLIGYPEWW-------GDRSRTGGRG-----AGRGQ-----GGQRQGIA 246

Query: 506 AAGKGR 523
             GKGR
Sbjct: 247 QGGKGR 252



 Score = 28.5 bits (62), Expect(2) = 1e-09
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +3

Query: 87  KENVFQFLMGLNSAHFGTVRSHLI 158
           +E + QFLMGL+   +G+VRS+++
Sbjct: 120 EERLHQFLMGLDDTIYGSVRSNIL 143


>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 55/189 (29%), Positives = 79/189 (41%), Gaps = 10/189 (5%)
 Frame = +2

Query: 8   DECENYTKLPSSN----DTQLLALIVNERVERKCVSIFNGIE*CTFWHC*ISSDSIEPML 175
           DE  ++ ++P          + A +  +R E K      G++   F     +  S++P+ 
Sbjct: 167 DELNDFDQIPMCTCNGCKCGISAALNKKREEEKLHQFLMGLDDTQFRTVRSNVLSLDPLP 226

Query: 176 KLKTILPQICKKEQH*NLARMTEHDGDGAALAVVGIHRSS------STSNLFCSHCHRSG 337
            L      + ++E+   + R  E  GD  A AV     SS      + S   CSHC R G
Sbjct: 227 NLNRAYQMVVQEERVGVMTRGKEERGDPIAFAVKSGRTSSWEKKPNTGSEKPCSHCKRDG 286

Query: 338 HDISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGMQVAGKGRTRRVAGTLQYGRAAAGK 517
           HDI   FQL+GYPDWW        DR    GR  G    GK   R ++G L+     A  
Sbjct: 287 HDIDSCFQLVGYPDWW-------GDRPRSVGRALG---RGKHVHRPMSGALKGRGNNAKV 336

Query: 518 GRTQLQQQT 544
             TQ+   T
Sbjct: 337 NMTQVVDDT 345


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
 Frame = +2

Query: 149 SSDSIEPMLKLKTILPQICKKEQH*NLARMTEHDGDGAALAVVGIHRSSST-------SN 307
           S   IEP+  L  +  ++ ++EQ+ N +R      D      +G    SST       S 
Sbjct: 202 SITDIEPLPDLYQVYSRVVREEQNLNASRTK----DVVKTEAIGFSVQSSTTPRFRDKST 257

Query: 308 LFCSHCHRSGHDISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGMQVAGKGR------- 466
           LFC+HC+R GH+++  F + GYPDWW    NP  ++    GR    + +  GR       
Sbjct: 258 LFCTHCNRKGHEVTQCFLVHGYPDWWL-EQNPQENQPSTRGRGSNGRGSSSGRGGNRSSA 316

Query: 467 -TRRVAGTLQYGRAAA----GKGRTQLQQ 538
            T R  G     +AAA    G G  Q+ Q
Sbjct: 317 PTTRGRGRANNAQAAAPTVSGDGNDQIAQ 345


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
 Frame = +2

Query: 8   DECENYTKLPSSNDTQLLALIVNERVERKCVSIFNGIE*CTFWHC*ISSDSIEPMLKLKT 187
           DE +NY          +L  IV ER + K      G++   F     +  +++P+  L  
Sbjct: 166 DELKNYQASAVCPHGSVLTAIVKERDDEKLHQFVLGLDSARFSGLCTNLINMDPLPSLGV 225

Query: 188 ILPQICKKEQH*NLARMTEHDGDGAALAVVGIHRSSSTSN----------------LFCS 319
              Q+ ++EQ  + +R  E   +   +  V  H  SS  +                + CS
Sbjct: 226 AYSQVIREEQRIHASRTQEQRQE--VVGFVARHEQSSAMSSPAQSSIESSIVKSRPVLCS 283

Query: 320 HCHRSGHDISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGMQVAGKGRTRRVA 481
           HC R+GH+    + ++G+PDWW  +      R   +GR RG + AG+G+ + VA
Sbjct: 284 HCGRTGHEKKDCWSIVGFPDWW--TERNGNGRG--SGRGRGGRGAGRGKGQIVA 333


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 9/169 (5%)
 Frame = +2

Query: 8   DECENYTKLPSSNDTQLLALIVNE----RVERKCVSIFNGIE*CTFWHC*ISSDSIEPML 175
           DE  NY  +P    T+    I  +    R E +      G++   +     +  SIEP+ 
Sbjct: 108 DELNNYDSIPVCTCTRCKCKITTQLEKKREEERVHQFLMGLDEDGYGTVRSNILSIEPLS 167

Query: 176 KLKTILPQICKKEQH*NLARMTEHDGDGAALAVVGIHRS----SSTSNLFCSHCHRSGHD 343
            L  +   I ++E+   + R  E  G   + AV    R+         + CS+C R GH+
Sbjct: 168 NLNRVYAMIVQQERVRTMTRTKEERGSPMSFAVQVGGRNPGGDGKDKTVICSNCKRKGHE 227

Query: 344 ISGSFQLIGYPDWWP*SSNPNTDRAILT-GRDRGMQVAGKGRTRRVAGT 487
           +   FQ I YP+WW     P T  +  + G  RG+Q  G G  R   GT
Sbjct: 228 VDSCFQRIAYPEWW--GDRPRTTTSGCSGGHGRGVQ-QGTGGGRGRGGT 273


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 13/169 (7%)
 Frame = +2

Query: 8   DECENYTKLPSSN----DTQLLALIVNERVERKCVSIFNGIE*CTFWHC*ISSDSIEPML 175
           DE  NY K+P  N       L  ++  +R E +      G++   +     +  S EP+ 
Sbjct: 120 DELNNYDKMPVCNCVGCKCNLTIVLEKKREEERVHQFLMGLDEEGYGTVSSNILSTEPLP 179

Query: 176 KLKTILPQICKKEQH*NLARMTEHDGDGAALAV-VGIHRSSSTS---NLFCSHCHRSGHD 343
            L  +   + ++E+   + R  E  G+  + A+ VG   S       N+ C++C R GHD
Sbjct: 180 NLNRVYAMVVQQERMRTMTRTKEERGNLMSFAMKVGGQNSRGEXKDRNVVCTNCKREGHD 239

Query: 344 ISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGMQVAG-----KGRTRR 475
           +   FQLIGY +WW      N  R  +  R  G +        KGRT R
Sbjct: 240 VDTCFQLIGYLEWW-----GNRXRTNVFXRXGGXKCGAHGGHDKGRTAR 283


>gb|EPS69771.1| hypothetical protein M569_04993 [Genlisea aurea]
          Length = 266

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 51/157 (32%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
 Frame = +2

Query: 164 EPMLKLKTILPQICKKEQH*NLARMTEHDGDGAALAV--VGIHRSSST-SNLFCSHCHRS 334
           EP+     I  +I ++EQH N+ R  +   D  A+AV      RSS   S+  CS C  S
Sbjct: 19  EPLPGFNQIYNRIIREEQHRNIKRSEDPRSDAVAMAVRRTAEERSSKIKSDKPCSVCGFS 78

Query: 335 GHDISGSFQLIGYPDWW---P*SSNPNTDRAILTG----------RDRG---MQVAGKGR 466
           GHD  G F L+GYP+WW   P        + +  G          R+RG    +V G+GR
Sbjct: 79  GHDKDGCFVLLGYPEWWGDRPRYQFDEKGKLVQCGGGPATSSQESRNRGGISRRVTGRGR 138

Query: 467 TRRVAGTLQYG----RAAAGKGRTQLQQQTVGRAIDA 565
            R   G+   G     A AG    Q    T G+ + A
Sbjct: 139 GR--GGSRSNGSREETAVAGPSTLQAHAATGGQVVSA 173


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
 Frame = +2

Query: 173 LKLKTILPQICKKEQH*NLARMTEHDGDGAALAV-VGIHRSSSTSNLF----CSHCHRSG 337
           + L +I  +I  +E+H  + R  E   D    AV  G++  +S + +     C+HC RS 
Sbjct: 223 ISLDSIYSEIIAEERHLTITRSKEERVDAVGFAVQTGVNAIASVTRVNNMGPCTHCGRSN 282

Query: 338 HDISGSFQLIGYPDWWP*SSNPNTDRAILTGRDRGMQVAGKGR 466
           H     F+L G P+W+   +    D +   GR R     G+GR
Sbjct: 283 HSADTCFKLHGVPEWY---TEKYGDTSSGRGRGRSSTPRGRGR 322



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 90  ENVFQFLMGLNSAHFGTVRSHLI 158
           E + QFLMGL++A FGT R++++
Sbjct: 192 ERIHQFLMGLDAAKFGTSRTNIL 214


>gb|EPS58350.1| hypothetical protein M569_16465 [Genlisea aurea]
          Length = 259

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
 Frame = +2

Query: 158 SIEPMLKLKTILPQICKKEQH*NLARMTEHDGDGAAL-AVVGIHRSSSTSNLFCSHCHRS 334
           SIEP+  L  +  +I ++E+H ++AR +  DG   A  +     +    SNL C  C   
Sbjct: 17  SIEPLPSLNQLYSRIVREERHRSVARTS--DGRRTAFNSQTHAEKKIDRSNLKCIACEGV 74

Query: 335 GHDISGSFQLIGYPDWWP*SSNPNTD-----------RAILTGRDRGMQVAGKGRTRRVA 481
           GH I G F +IGYP+WW   + P ++             I TGR R     G+G +RR  
Sbjct: 75  GHTIDGCFAVIGYPEWW--GARPKSEIKNQKVVLEYLSGIKTGRGR-----GRGNSRRPV 127

Query: 482 ---GTLQYGRAAAGKGRTQL-----QQQTVGRAIDAW 568
               T+   + A       L      QQ  G+ +D W
Sbjct: 128 ARNATVHIDQKAKLDNSLGLLDKLDHQQESGKIVDDW 164


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