BLASTX nr result
ID: Catharanthus23_contig00031700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00031700
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006372828.1| hypothetical protein POPTR_0017s05450g [Popu... 154 1e-35
ref|XP_002327997.1| GRAS family transcription factor [Populus tr... 154 1e-35
ref|XP_002309782.1| hypothetical protein POPTR_0007s01650g [Popu... 147 1e-33
gb|ESW22445.1| hypothetical protein PHAVU_005G154500g [Phaseolus... 142 6e-32
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer... 137 1e-30
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera] 137 2e-30
gb|EMJ22811.1| hypothetical protein PRUPE_ppa1027119mg [Prunus p... 133 3e-29
gb|EOY04802.1| GRAS family transcription factor [Theobroma cacao] 132 6e-29
dbj|BAF91722.1| putative SHORT-ROOT protein [Ipomoea nil] 131 8e-29
ref|XP_006442965.1| hypothetical protein CICLE_v10020072mg [Citr... 130 2e-28
ref|XP_004244750.1| PREDICTED: protein SHORT-ROOT-like [Solanum ... 129 3e-28
ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine ... 129 3e-28
ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine ... 128 9e-28
ref|XP_004486891.1| PREDICTED: protein SHORT-ROOT-like [Cicer ar... 125 4e-27
ref|XP_006355847.1| PREDICTED: protein SHORT-ROOT-like [Solanum ... 124 2e-26
gb|EXB23146.1| hypothetical protein L484_016163 [Morus notabilis] 119 5e-25
ref|XP_004165311.1| PREDICTED: LOW QUALITY PROTEIN: protein SHOR... 113 2e-23
ref|XP_004145036.1| PREDICTED: protein SHORT-ROOT-like [Cucumis ... 113 2e-23
ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setari... 99 8e-19
ref|XP_004231927.1| PREDICTED: protein SHORT-ROOT-like [Solanum ... 97 2e-18
>ref|XP_006372828.1| hypothetical protein POPTR_0017s05450g [Populus trichocarpa]
gi|550319476|gb|ERP50625.1| hypothetical protein
POPTR_0017s05450g [Populus trichocarpa]
Length = 441
Score = 154 bits (389), Expect = 1e-35
Identities = 71/95 (74%), Positives = 82/95 (86%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSECRESGVQWSERLREASSPFRYSDDIVDDVKALLKR 180
LERE SR+I+R+LACD++ G E RE GVQWSERLREA SP +SDD+VDDVKALLKR
Sbjct: 347 LERECSRNIVRVLACDEETGGGECERRERGVQWSERLREAFSPVGFSDDVVDDVKALLKR 406
Query: 181 YRSGWSLRLPQSDHESGIYLTWKEDPVVWASAWKP 285
Y++GW+L LPQ DHESGIYLTWKE+PVVWASAWKP
Sbjct: 407 YKAGWALVLPQGDHESGIYLTWKEEPVVWASAWKP 441
>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
Length = 411
Score = 154 bits (389), Expect = 1e-35
Identities = 71/95 (74%), Positives = 82/95 (86%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSECRESGVQWSERLREASSPFRYSDDIVDDVKALLKR 180
LERE SR+I+R+LACD++ G E RE GVQWSERLREA SP +SDD+VDDVKALLKR
Sbjct: 317 LERECSRNIVRVLACDEETGGGECERRERGVQWSERLREAFSPVGFSDDVVDDVKALLKR 376
Query: 181 YRSGWSLRLPQSDHESGIYLTWKEDPVVWASAWKP 285
Y++GW+L LPQ DHESGIYLTWKE+PVVWASAWKP
Sbjct: 377 YKAGWALVLPQGDHESGIYLTWKEEPVVWASAWKP 411
>ref|XP_002309782.1| hypothetical protein POPTR_0007s01650g [Populus trichocarpa]
gi|222852685|gb|EEE90232.1| hypothetical protein
POPTR_0007s01650g [Populus trichocarpa]
Length = 411
Score = 147 bits (372), Expect = 1e-33
Identities = 69/95 (72%), Positives = 79/95 (83%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSECRESGVQWSERLREASSPFRYSDDIVDDVKALLKR 180
LERE SR+I+R+LACD+ G E RE G QW ERLREA SP +SDD+VDDVKALLKR
Sbjct: 317 LERECSRNIVRVLACDEGNDGGECERRERGSQWFERLREAFSPVGFSDDVVDDVKALLKR 376
Query: 181 YRSGWSLRLPQSDHESGIYLTWKEDPVVWASAWKP 285
YR+GW+L LPQ DH+SGIYLTWKE+PVVWASAWKP
Sbjct: 377 YRAGWALVLPQGDHDSGIYLTWKEEPVVWASAWKP 411
>gb|ESW22445.1| hypothetical protein PHAVU_005G154500g [Phaseolus vulgaris]
Length = 441
Score = 142 bits (357), Expect = 6e-32
Identities = 70/99 (70%), Positives = 78/99 (78%), Gaps = 4/99 (4%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSEC---RESGVQWSERLREASSPFRYSDDIVDDVKAL 171
LERE SRSI+R+LAC DD+ D G EC RE G QW ERLR A SP +SDD+VDDVKAL
Sbjct: 343 LERECSRSIVRVLACCDDLEDDGGECCERRERGTQWCERLRNAFSPVGFSDDVVDDVKAL 402
Query: 172 LKRYRSGWSLRLPQ-SDHESGIYLTWKEDPVVWASAWKP 285
LKRY+ GWSL + Q DH SGIYLTWKE+PVVWASAWKP
Sbjct: 403 LKRYQPGWSLVVSQGDDHLSGIYLTWKEEPVVWASAWKP 441
>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
gi|296081342|emb|CBI17688.3| unnamed protein product
[Vitis vinifera]
Length = 436
Score = 137 bits (345), Expect = 1e-30
Identities = 66/99 (66%), Positives = 79/99 (79%), Gaps = 4/99 (4%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSEC--RESGVQWSERLREASSPFRYSDDIVDDVKALL 174
LERE SRSI+R+LACDD D G +C RE G+QWSE L+E SP +S+D+VDDVKALL
Sbjct: 338 LERECSRSIVRVLACDDIEDDTGEDCERREKGIQWSEGLKEVFSPLGFSEDVVDDVKALL 397
Query: 175 KRYRSGWSLRLPQ--SDHESGIYLTWKEDPVVWASAWKP 285
KRYRSGW+L PQ +H+ GIYLTWK++PVVWASAWKP
Sbjct: 398 KRYRSGWALVPPQQGENHQLGIYLTWKDEPVVWASAWKP 436
>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
Length = 436
Score = 137 bits (344), Expect = 2e-30
Identities = 66/99 (66%), Positives = 79/99 (79%), Gaps = 4/99 (4%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSEC--RESGVQWSERLREASSPFRYSDDIVDDVKALL 174
LERE SRSI+R+LACDD D G +C RE G+QWSE L+E SP +S+D+VDDVKALL
Sbjct: 338 LERECSRSIVRVLACDDIEDDTGEDCERREKGIQWSEGLKEXFSPLGFSEDVVDDVKALL 397
Query: 175 KRYRSGWSLRLPQ--SDHESGIYLTWKEDPVVWASAWKP 285
KRYRSGW+L PQ +H+ GIYLTWK++PVVWASAWKP
Sbjct: 398 KRYRSGWALVPPQQGENHQLGIYLTWKDEPVVWASAWKP 436
>gb|EMJ22811.1| hypothetical protein PRUPE_ppa1027119mg [Prunus persica]
Length = 449
Score = 133 bits (334), Expect = 3e-29
Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 8/103 (7%)
Frame = +1
Query: 1 LEREYSRSIIRILACDD---DIVDGGSEC--RESGVQWSERLREASSPFRYSDDIVDDVK 165
LERE SRSI+R+L CD D +GG EC RE G QWSERL+EA SPF +SDD+VDDVK
Sbjct: 345 LERECSRSIVRVLGCDHHDHDDKNGGGECERRERGSQWSERLKEAFSPFGFSDDVVDDVK 404
Query: 166 ALLKRYRSGWSLRLP---QSDHESGIYLTWKEDPVVWASAWKP 285
ALLKRYR+GW+L LP + ++G+YLTWKE+P VWAS WKP
Sbjct: 405 ALLKRYRAGWALVLPPQGEDIDQTGVYLTWKEEPAVWASIWKP 447
>gb|EOY04802.1| GRAS family transcription factor [Theobroma cacao]
Length = 457
Score = 132 bits (331), Expect = 6e-29
Identities = 64/97 (65%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 LEREYSRSIIRILACDD--DIVDGGSECRESGVQWSERLREASSPFRYSDDIVDDVKALL 174
LERE SRSI+R+LACD+ D G E RE G QWS+RL+EA SP +SDD+VDDVKALL
Sbjct: 362 LERECSRSIVRVLACDEGEDSTAGECERREKGSQWSDRLKEAFSPVGFSDDVVDDVKALL 421
Query: 175 KRYRSGWSLRLPQSDHESGIYLTWKEDPVVWASAWKP 285
KRYR+GW+L P D E+G+YLTWK++ VVWASAWKP
Sbjct: 422 KRYRAGWALAQPHQD-ETGLYLTWKDEAVVWASAWKP 457
>dbj|BAF91722.1| putative SHORT-ROOT protein [Ipomoea nil]
Length = 412
Score = 131 bits (330), Expect = 8e-29
Identities = 65/104 (62%), Positives = 77/104 (74%), Gaps = 9/104 (8%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSECRESGVQWSERLREAS-SPFRYSDDIVDDVKALLK 177
LERE SRSI+R+L CD+ I DG SE RE G+QWSE+LR+A SPF +DD VDDVKALLK
Sbjct: 309 LERECSRSILRVLGCDEQISDGDSENRERGIQWSEKLRDAGFSPFTLNDDAVDDVKALLK 368
Query: 178 RYRSGWSLR--------LPQSDHESGIYLTWKEDPVVWASAWKP 285
RY+ GW+L+ S SGIYLTWK++PVVWASAWKP
Sbjct: 369 RYKGGWALQQQAAGEDNTTSSSSTSGIYLTWKDEPVVWASAWKP 412
>ref|XP_006442965.1| hypothetical protein CICLE_v10020072mg [Citrus clementina]
gi|568850072|ref|XP_006478752.1| PREDICTED: protein
SHORT-ROOT-like [Citrus sinensis]
gi|557545227|gb|ESR56205.1| hypothetical protein
CICLE_v10020072mg [Citrus clementina]
Length = 460
Score = 130 bits (326), Expect = 2e-28
Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 12/107 (11%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGS--------EC--RESGVQWSERLREAS-SPFRYSDD 147
LERE SR I+R+LACDDD + EC RE G QW+E+L+EA+ SP +SDD
Sbjct: 354 LERECSRDIVRVLACDDDNNSSNNGNGDREEEECERRERGSQWAEKLKEAAFSPVGFSDD 413
Query: 148 IVDDVKALLKRYRSGWSLRLPQ-SDHESGIYLTWKEDPVVWASAWKP 285
+VDDVKALLKRYR+GW L LPQ D+ SGIYLTWKE+PVVWASAWKP
Sbjct: 414 VVDDVKALLKRYRAGWGLVLPQGDDNTSGIYLTWKEEPVVWASAWKP 460
>ref|XP_004244750.1| PREDICTED: protein SHORT-ROOT-like [Solanum lycopersicum]
Length = 451
Score = 129 bits (325), Expect = 3e-28
Identities = 64/101 (63%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVD--GGSECRESGVQWSERLREASSPFRYSDDIVDDVKALL 174
+ERE S+ I+++LACD+DI D G SE RE G QW ERL+E +PF +DD VDDVKALL
Sbjct: 345 IERECSKCIVKVLACDNDIGDDQGYSERRERGNQWCERLKECFTPFTLNDDAVDDVKALL 404
Query: 175 KRYRSGWSLRLPQSDHES-GIYLTWKEDPVVWASAWKP*KK 294
KRY++GWSL LPQ++ ES GIYLTW+E VVWAS+WKP +K
Sbjct: 405 KRYKAGWSLVLPQANQESPGIYLTWREQQVVWASSWKPQEK 445
>ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
Length = 443
Score = 129 bits (325), Expect = 3e-28
Identities = 69/106 (65%), Positives = 79/106 (74%), Gaps = 11/106 (10%)
Frame = +1
Query: 1 LEREYSRSIIRILAC-------DDDIVDGGSEC---RESGVQWSERLREASSPFRYSDDI 150
LERE SRSI+R+LAC +DD G +C RE G+QW ERLR A SP +SDD+
Sbjct: 340 LERECSRSIVRVLACCGTGHEFEDD--HGEFDCCERRERGIQWCERLRNAFSPSGFSDDV 397
Query: 151 VDDVKALLKRYRSGWSLRLPQSD-HESGIYLTWKEDPVVWASAWKP 285
VDDVKALLKRY+SGWSL + Q D H SGIYLTWKE+PVVWASAWKP
Sbjct: 398 VDDVKALLKRYQSGWSLVVTQGDEHISGIYLTWKEEPVVWASAWKP 443
>ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
Length = 437
Score = 128 bits (321), Expect = 9e-28
Identities = 66/102 (64%), Positives = 76/102 (74%), Gaps = 7/102 (6%)
Frame = +1
Query: 1 LEREYSRSIIRILAC------DDDIVDGGSECRESGVQWSERLREASSPFRYSDDIVDDV 162
LERE SR+I+R+LAC +DD E RE G+QW ERLR A SP +SDD+VDDV
Sbjct: 336 LERECSRTIVRVLACCGSGEFEDDGEFDCCERRERGIQWCERLRSAFSPSGFSDDVVDDV 395
Query: 163 KALLKRYRSGWSLRLPQSD-HESGIYLTWKEDPVVWASAWKP 285
KALLKRY+ GWSL + Q D H SGIYLTWKE+PVVWASAWKP
Sbjct: 396 KALLKRYQPGWSLVVSQGDEHLSGIYLTWKEEPVVWASAWKP 437
>ref|XP_004486891.1| PREDICTED: protein SHORT-ROOT-like [Cicer arietinum]
Length = 446
Score = 125 bits (315), Expect = 4e-27
Identities = 60/101 (59%), Positives = 77/101 (76%), Gaps = 6/101 (5%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDI-----VDGGSECRESGVQWSERLREASSPFRYSDDIVDDVK 165
LERE SRSI+R+LAC ++ + E RE G QW ++L SP+ +SDD+VDDVK
Sbjct: 346 LERECSRSIVRVLACSNEFDHENNIGDNCERRERGKQWCKKLSNEFSPYGFSDDVVDDVK 405
Query: 166 ALLKRYRSGWSLRLPQ-SDHESGIYLTWKEDPVVWASAWKP 285
ALLKRY+SGWSL +PQ D+++GIYLTWKE+PVVWAS+WKP
Sbjct: 406 ALLKRYQSGWSLVVPQGDDNQTGIYLTWKEEPVVWASSWKP 446
>ref|XP_006355847.1| PREDICTED: protein SHORT-ROOT-like [Solanum tuberosum]
Length = 419
Score = 124 bits (310), Expect = 2e-26
Identities = 60/102 (58%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIV---DGGSECRESGVQWSERLREASSPFRYSDDIVDDVKAL 171
+ERE S+ I+++LACD++ + G SE RE G QW RL+E +PF +DD VDDVKAL
Sbjct: 312 IERECSKCIVKVLACDNNEIGDDQGDSERRERGNQWCTRLKECFTPFTLNDDAVDDVKAL 371
Query: 172 LKRYRSGWSLRLPQSDHES-GIYLTWKEDPVVWASAWKP*KK 294
LKRY++GWSL LPQ++ ES GIYLTW+E+ VVWAS+WKP +K
Sbjct: 372 LKRYKAGWSLVLPQANQESPGIYLTWREEQVVWASSWKPQEK 413
>gb|EXB23146.1| hypothetical protein L484_016163 [Morus notabilis]
Length = 528
Score = 119 bits (297), Expect = 5e-25
Identities = 66/126 (52%), Positives = 77/126 (61%), Gaps = 31/126 (24%)
Frame = +1
Query: 1 LEREYSRSIIRILAC-------DDDIVDGGS----------------ECRESGVQWSERL 111
LERE SR I+R LAC DD+ + G E RE G QWSER+
Sbjct: 403 LERECSRGIVRALACGGGGGDYDDENKEQGEGEETNYAVKSGDGWDFERREKGTQWSERM 462
Query: 112 REASSPFRYSDDIVDDVKALLKRYRSGWSLRLPQS--------DHESGIYLTWKEDPVVW 267
++A SP YSDD+VDDVKALLKRY SGW L LPQ+ ++ GIYLTWKE+PVVW
Sbjct: 463 KKAFSPVLYSDDVVDDVKALLKRYPSGWGLVLPQAKQQQQEQQQNDHGIYLTWKEEPVVW 522
Query: 268 ASAWKP 285
ASAWKP
Sbjct: 523 ASAWKP 528
>ref|XP_004165311.1| PREDICTED: LOW QUALITY PROTEIN: protein SHORT-ROOT-like [Cucumis
sativus]
Length = 459
Score = 113 bits (283), Expect = 2e-23
Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 15/110 (13%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDG---GSECRESGVQWSERLREAS-SPFRYSDDIVDDVKA 168
LERE SRSI+R+L CD D + GSE RE G QW++RL++A S +S+D++DDVKA
Sbjct: 350 LERECSRSIVRLLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKA 409
Query: 169 LLKRYRSGWSLRLPQS----DHE-------SGIYLTWKEDPVVWASAWKP 285
LLKRY+ GW+L P + D E SGIYLTWKE+PVVW SAWKP
Sbjct: 410 LLKRYKPGWALLRPATAAVRDEEENGDGESSGIYLTWKEEPVVWVSAWKP 459
>ref|XP_004145036.1| PREDICTED: protein SHORT-ROOT-like [Cucumis sativus]
gi|449471114|ref|XP_004153213.1| PREDICTED: protein
SHORT-ROOT-like [Cucumis sativus]
Length = 459
Score = 113 bits (283), Expect = 2e-23
Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 15/110 (13%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDG---GSECRESGVQWSERLREAS-SPFRYSDDIVDDVKA 168
LERE SRSI+R+L CD D + GSE RE G QW++RL++A S +S+D++DDVKA
Sbjct: 350 LERECSRSIVRLLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKA 409
Query: 169 LLKRYRSGWSLRLPQS----DHE-------SGIYLTWKEDPVVWASAWKP 285
LLKRY+ GW+L P + D E SGIYLTWKE+PVVW SAWKP
Sbjct: 410 LLKRYKPGWALLRPATAAVRDEEENGDGESSGIYLTWKEEPVVWVSAWKP 459
>ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setaria italica]
Length = 635
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSECRESGVQWSERLREAS-SPFRYSDDIVDDVKALLK 177
LER R+I+ +++C +E RE+G W+ R+R A SP +SDD+ DD+++LL+
Sbjct: 541 LERAAGRAIVDLVSCP---ASESAERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLR 597
Query: 178 RYRSGWSLRLPQSDH--ESGIYLTWKEDPVVWASAWKP 285
RYR GWSLR P +D +G++L WKE PVVW SAW+P
Sbjct: 598 RYREGWSLREPGTDDGAAAGVFLAWKEQPVVWTSAWRP 635
>ref|XP_004231927.1| PREDICTED: protein SHORT-ROOT-like [Solanum lycopersicum]
Length = 507
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/96 (51%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 LEREYSRSIIRILACDDDIVDGGSECRESGVQWSERLREAS-SPFRYSDDIVDDVKALLK 177
LER+ RSI+ +LAC E RE+G +WS R+ SP YSD++ DDV+ALL+
Sbjct: 416 LERQAGRSIVDLLACPPS---ESMERRETGAKWSHRMHAGGFSPVLYSDEVCDDVRALLR 472
Query: 178 RYRSGWSLRLPQSDHESGIYLTWKEDPVVWASAWKP 285
RY+ GWS+ D +GI+L+WKE PVVWASAWKP
Sbjct: 473 RYKDGWSMGQCGGD-SAGIFLSWKEQPVVWASAWKP 507