BLASTX nr result

ID: Catharanthus23_contig00030581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00030581
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328295.1| predicted protein [Populus trichocarpa] gi|5...    58   2e-06
gb|EXB74654.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synth...    55   1e-05
dbj|BAB09833.1| GcpE protein [Arabidopsis thaliana]                    55   1e-05
ref|XP_004487120.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl d...    55   1e-05
ref|XP_004487119.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl d...    55   1e-05
ref|XP_006280064.1| hypothetical protein CARUB_v10025946mg [Caps...    55   1e-05
ref|XP_004295028.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl d...    55   1e-05
gb|EMJ08408.1| hypothetical protein PRUPE_ppa002111mg [Prunus pe...    55   1e-05
gb|AAO24774.1| GCPE protein [Catharanthus roseus]                      55   1e-05
ref|NP_200868.2| 4-hydroxy-3-methylbut-2-enyl diphosphate syntha...    55   1e-05
gb|AFB70983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase...    55   1e-05
ref|XP_006400831.1| hypothetical protein EUTSA_v10012774mg [Eutr...    55   1e-05
ref|XP_002864694.1| hypothetical protein ARALYDRAFT_919295 [Arab...    55   1e-05
ref|XP_002530286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate ...    55   1e-05
ref|NP_001119467.1| 4-hydroxy-3-methylbut-2-enyl diphosphate syn...    55   1e-05
dbj|BAF98296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt...    55   1e-05
ref|XP_002285130.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl d...    55   1e-05
gb|AAM19840.1| AT5g60600/mup24_10 [Arabidopsis thaliana]               55   1e-05
ref|NP_851233.1| 4-hydroxy-3-methylbut-2-enyl diphosphate syntha...    55   1e-05
gb|AAL91150.1| GcpE protein [Arabidopsis thaliana] gi|34365569|g...    55   1e-05

>ref|XP_002328295.1| predicted protein [Populus trichocarpa]
           gi|566167939|ref|XP_006384896.1| hypothetical protein
           POPTR_0004s22010g [Populus trichocarpa]
           gi|550341664|gb|ERP62693.1| hypothetical protein
           POPTR_0004s22010g [Populus trichocarpa]
          Length = 760

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +3

Query: 246 FSLLQVFTPLVEKCKKYGRAMRIGTNHG 329
           F L QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 233 FLLCQVFTPLVEKCKKYGRAMRIGTNHG 260


>gb|EXB74654.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Morus
           notabilis]
          Length = 978

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 455 QVFTPLVEKCKKYGRAMRIGTNHG 478


>dbj|BAB09833.1| GcpE protein [Arabidopsis thaliana]
          Length = 716

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 192 QVFTPLVEKCKKYGRAMRIGTNHG 215


>ref|XP_004487120.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 740

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>ref|XP_004487119.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
           chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 774

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>ref|XP_006280064.1| hypothetical protein CARUB_v10025946mg [Capsella rubella]
           gi|482548768|gb|EOA12962.1| hypothetical protein
           CARUB_v10025946mg [Capsella rubella]
          Length = 741

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>ref|XP_004295028.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 740

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>gb|EMJ08408.1| hypothetical protein PRUPE_ppa002111mg [Prunus persica]
          Length = 715

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 192 QVFTPLVEKCKKYGRAMRIGTNHG 215


>gb|AAO24774.1| GCPE protein [Catharanthus roseus]
          Length = 740

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>ref|NP_200868.2| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
           thaliana] gi|27462472|gb|AAO15446.1|AF434673_1 GcpE
           [Arabidopsis thaliana] gi|332009971|gb|AED97354.1|
           4-hydroxy-3-methylbut-2-enyl diphosphate synthase
           [Arabidopsis thaliana]
          Length = 740

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>gb|AFB70983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase, partial
           [Mitragyna speciosa]
          Length = 237

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 38  QVFTPLVEKCKKYGRAMRIGTNHG 61


>ref|XP_006400831.1| hypothetical protein EUTSA_v10012774mg [Eutrema salsugineum]
           gi|312282499|dbj|BAJ34115.1| unnamed protein product
           [Thellungiella halophila] gi|557101921|gb|ESQ42284.1|
           hypothetical protein EUTSA_v10012774mg [Eutrema
           salsugineum]
          Length = 742

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 218 QVFTPLVEKCKKYGRAMRIGTNHG 241


>ref|XP_002864694.1| hypothetical protein ARALYDRAFT_919295 [Arabidopsis lyrata subsp.
           lyrata] gi|297310529|gb|EFH40953.1| hypothetical protein
           ARALYDRAFT_919295 [Arabidopsis lyrata subsp. lyrata]
          Length = 741

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>ref|XP_002530286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
           [Ricinus communis] gi|223530184|gb|EEF32093.1|
           4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
           putative [Ricinus communis]
          Length = 716

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 219 QVFTPLVEKCKKYGRAMRIGTNHG 242


>ref|NP_001119467.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
           thaliana] gi|332009972|gb|AED97355.1|
           4-hydroxy-3-methylbut-2-enyl diphosphate synthase
           [Arabidopsis thaliana]
          Length = 717

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>dbj|BAF98296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea
           brasiliensis]
          Length = 740

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>ref|XP_002285130.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
           [Vitis vinifera] gi|297746253|emb|CBI16309.3| unnamed
           protein product [Vitis vinifera]
          Length = 740

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>gb|AAM19840.1| AT5g60600/mup24_10 [Arabidopsis thaliana]
          Length = 741

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>ref|NP_851233.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
           thaliana] gi|391359289|sp|F4K0E8.1|ISPG_ARATH RecName:
           Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate
           synthase, chloroplastic; AltName:
           Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
           synthase; AltName: Full=Protein CHLOROPLAST BIOGENESIS
           4; AltName: Full=Protein CONSTITUTIVE SUBTILISIN 3;
           Flags: Precursor gi|332009970|gb|AED97353.1|
           4-hydroxy-3-methylbut-2-enyl diphosphate synthase
           [Arabidopsis thaliana]
          Length = 741

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


>gb|AAL91150.1| GcpE protein [Arabidopsis thaliana] gi|34365569|gb|AAQ65096.1|
           At5g60600 [Arabidopsis thaliana]
          Length = 741

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 258 QVFTPLVEKCKKYGRAMRIGTNHG 329
           QVFTPLVEKCKKYGRAMRIGTNHG
Sbjct: 217 QVFTPLVEKCKKYGRAMRIGTNHG 240


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