BLASTX nr result
ID: Catharanthus23_contig00030411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00030411
(234 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis] 79 3e-17
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 82 2e-15
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 75 7e-14
gb|AFB73911.1| polyprotein [Citrus sinensis] 72 4e-13
gb|ABG22121.1| polyprotein [Solanum melongena] 72 6e-13
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 70 1e-12
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 70 1e-12
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 70 1e-12
gb|AFB73912.1| polyprotein [Citrus sinensis] 70 4e-12
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 69 4e-12
gb|ABG22123.1| polyprotein [Prunus avium] 72 4e-12
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 70 8e-12
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 70 1e-11
ref|XP_006387689.1| hypothetical protein POPTR_0672s00200g [Popu... 69 2e-11
ref|XP_006388326.1| hypothetical protein POPTR_0228s002002g, par... 69 2e-11
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 65 2e-11
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 65 2e-11
gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsi... 73 5e-11
ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259... 72 6e-11
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 72 6e-11
>gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis]
Length = 987
Score = 78.6 bits (192), Expect(2) = 3e-17
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVL 68
T++Y TL GNCISWK QLQ VVALS+ EAEYIA T K+AIW+QGLLSEL +L
Sbjct: 109 TSAYMMTLDGNCISWKSQLQLVVALSSIEAEYIAGTKGFKEAIWIQGLLSELKIL 163
Score = 35.4 bits (80), Expect(2) = 3e-17
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
IY DSQS +HLCKNP+Y
Sbjct: 169 IYLDSQSAIHLCKNPIY 185
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 81.6 bits (200), Expect(2) = 2e-15
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNS 62
TT Y FTL G +SWK QLQ +VALSTT+AEYIA T+A+K+A+WLQGL+ EL VLNS
Sbjct: 637 TTGYIFTLFGGPVSWKSQLQSIVALSTTKAEYIAATEAMKEALWLQGLVKELXVLNS 693
Score = 25.8 bits (55), Expect(2) = 2e-15
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
I+ DSQS + LC NP +
Sbjct: 697 IFLDSQSAIQLCNNPXF 713
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 75.5 bits (184), Expect(2) = 7e-14
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNS 62
TTSY FTL G ++WK QLQ +VALST E EYI T A+K+ +WLQGL+ EL VLNS
Sbjct: 1712 TTSYIFTLFGGPVNWKSQLQSIVALSTXEVEYITTTKAMKETLWLQGLVKELGVLNS 1768
Score = 26.9 bits (58), Expect(2) = 7e-14
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
I++DSQS + LCKN V+
Sbjct: 1772 IFSDSQSTIQLCKNXVF 1788
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 72.0 bits (175), Expect(2) = 4e-13
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
TT Y FTLAG +SW +LQ VVALSTTEAEY+A T A KKAIW+Q LL EL
Sbjct: 1174 TTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAIWIQRLLEEL 1225
Score = 27.7 bits (60), Expect(2) = 4e-13
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 56 LIYTDSQSCLHLCKNPVY 3
L++ DSQS LH+ +NP +
Sbjct: 1233 LVFCDSQSALHIARNPAF 1250
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 72.4 bits (176), Expect(2) = 6e-13
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHV 71
TT Y FTLA +SWK LQ VALSTTEAEY+A T+A+K+AIWL GLL EL V
Sbjct: 275 TTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLHGLLEELGV 328
Score = 26.9 bits (58), Expect(2) = 6e-13
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -2
Query: 56 LIYTDSQSCLHLCKNPVY 3
++++DSQS +HL KN V+
Sbjct: 334 MVHSDSQSAIHLAKNQVF 351
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 70.5 bits (171), Expect(2) = 1e-12
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
TT Y FTLAG +SW +LQ VVALSTTEAEY+A T A K+AIW+Q L+ EL
Sbjct: 1170 TTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEEL 1221
Score = 27.7 bits (60), Expect(2) = 1e-12
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y DSQS LH+ +NP +
Sbjct: 1230 VYCDSQSALHIARNPAF 1246
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 70.5 bits (171), Expect(2) = 1e-12
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
TT Y FTLAG +SW +LQ VVALSTTEAEY+A T A K+AIW+Q L+ EL
Sbjct: 1170 TTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEEL 1221
Score = 27.7 bits (60), Expect(2) = 1e-12
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y DSQS LH+ +NP +
Sbjct: 1230 VYCDSQSALHIARNPAF 1246
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 70.5 bits (171), Expect(2) = 1e-12
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
TT Y FTLAG +SW +LQ VVALSTTEAEY+A T A K+AIW+Q L+ EL
Sbjct: 1170 TTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEEL 1221
Score = 27.7 bits (60), Expect(2) = 1e-12
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y DSQS LH+ +NP +
Sbjct: 1230 VYCDSQSALHIARNPAF 1246
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 70.5 bits (171), Expect(2) = 4e-12
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
TT Y FTLAG +SW +LQ VVALSTTEAEY+A T A K+AIW+Q LL EL
Sbjct: 1174 TTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEEL 1225
Score = 26.2 bits (56), Expect(2) = 4e-12
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
++ DSQS LH+ +NP +
Sbjct: 1234 VFCDSQSALHIARNPAF 1250
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 68.9 bits (167), Expect(2) = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
TT Y FTL G +SW +LQ VVALSTTEAEY+A T A K+AIW+Q L+ EL
Sbjct: 1170 TTGYVFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEEL 1221
Score = 27.7 bits (60), Expect(2) = 4e-12
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y DSQS LH+ +NP +
Sbjct: 1230 VYCDSQSALHIARNPAF 1246
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 72.0 bits (175), Expect(2) = 4e-12
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHV 71
TT + FT+AG +SW+ LQ VALSTTEAEY+A T+AIK+AIWLQGLL +L V
Sbjct: 190 TTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDLGV 243
Score = 24.6 bits (52), Expect(2) = 4e-12
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y DSQS ++L KN V+
Sbjct: 250 VYCDSQSAIYLAKNQVH 266
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 70.1 bits (170), Expect(2) = 8e-12
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
TT Y FTLAG +SW +LQ VVALSTTEAEY+A T A K+AIW Q LL EL
Sbjct: 1170 TTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRLLEEL 1221
Score = 25.4 bits (54), Expect(2) = 8e-12
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y DS S LH+ +NP +
Sbjct: 1230 VYCDSPSALHIARNPAF 1246
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 70.5 bits (171), Expect(2) = 1e-11
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = -3
Query: 229 TSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNSK 59
T Y FT G +SWK LQ VVALSTTEAEY+A T+A+K+AIWL+G+ EL + K
Sbjct: 1074 TGYVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGK 1130
Score = 24.6 bits (52), Expect(2) = 1e-11
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 80 IACFKF*SLIYTDSQSCLHLCKN 12
+A ++ ++Y D+QS +HL KN
Sbjct: 1124 LAMYRGKVVVYCDNQSAIHLAKN 1146
>ref|XP_006387689.1| hypothetical protein POPTR_0672s00200g [Populus trichocarpa]
gi|550308159|gb|ERP46603.1| hypothetical protein
POPTR_0672s00200g [Populus trichocarpa]
Length = 783
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNSK 59
TT Y +TL G +SW LQ +VALSTTEAEY+A +++ K+ +WLQ L EL LN K
Sbjct: 54 TTGYVYTLGGTAVSWSSTLQKIVALSTTEAEYVAVSESAKEIVWLQSFLKELGKLNGK 111
Score = 25.8 bits (55), Expect(2) = 2e-11
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y+DSQS + L KNP +
Sbjct: 114 LYSDSQSAIFLAKNPAF 130
>ref|XP_006388326.1| hypothetical protein POPTR_0228s002002g, partial [Populus
trichocarpa] gi|550310006|gb|ERP47240.1| hypothetical
protein POPTR_0228s002002g, partial [Populus
trichocarpa]
Length = 691
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNSK 59
TT Y +TL G +SW LQ +VALSTTEAEY+A +++ K+ +WLQ L EL LN K
Sbjct: 39 TTGYVYTLGGTAVSWSSTLQKIVALSTTEAEYVAVSESAKEIVWLQSFLKELGKLNGK 96
Score = 25.8 bits (55), Expect(2) = 2e-11
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 53 IYTDSQSCLHLCKNPVY 3
+Y+DSQS + L KNP +
Sbjct: 99 LYSDSQSAIFLAKNPAF 115
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 64.7 bits (156), Expect(2) = 2e-11
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 229 TSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNSK 59
T Y FTL G ISW+ LQP VALSTTEAEY++ T+ +K+ +WL G L L + SK
Sbjct: 1501 TCYIFTLFGCAISWRASLQPTVALSTTEAEYMSLTEGVKEGMWLNGFLGSLGLNLSK 1557
Score = 29.3 bits (64), Expect(2) = 2e-11
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 56 LIYTDSQSCLHLCKNPVY 3
+IY DSQS L L KNPVY
Sbjct: 1559 VIYCDSQSALCLAKNPVY 1576
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 64.7 bits (156), Expect(2) = 2e-11
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3
Query: 229 TSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNSK 59
T Y FTL G ISW+ LQP VALSTTEAEY++ T+ +K+ +WL G L L + SK
Sbjct: 1264 TCYIFTLFGCAISWRASLQPTVALSTTEAEYMSLTEGVKEGMWLNGFLGSLGLNLSK 1320
Score = 29.3 bits (64), Expect(2) = 2e-11
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 56 LIYTDSQSCLHLCKNPVY 3
+IY DSQS L L KNPVY
Sbjct: 1322 VIYCDSQSALCLAKNPVY 1339
>gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsis thaliana]
gi|7267201|emb|CAB77912.1| putative transposon protein
[Arabidopsis thaliana]
Length = 570
Score = 72.8 bits (177), Expect = 5e-11
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = -3
Query: 232 TTSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNSK 59
TT Y FT+ GN +SWK LQ +A+ TTEAEY+A T+A+K+A+W+QGLL ++ V K
Sbjct: 447 TTGYVFTVGGNTVSWKSNLQNTIAIPTTEAEYVAITEAVKEALWMQGLLKDMGVKQDK 504
>ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259364 [Solanum
lycopersicum]
Length = 505
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = -3
Query: 229 TSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSELHVLNSKA 56
T Y FTL G+ +SWK LQP V LSTTEAEY+A T+A+K+ IWL+GL+S+L + + +A
Sbjct: 376 TGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAVKEGIWLKGLVSDLGLHHDQA 433
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -3
Query: 229 TSYFFTLAGNCISWKLQLQPVVALSTTEAEYIADTDAIKKAIWLQGLLSEL 77
T Y F + GN ISWK LQ VVALSTTEAEY+A T+A+K+AIWL+GL SEL
Sbjct: 1071 TGYVFKVGGNTISWKSSLQSVVALSTTEAEYMALTEAVKEAIWLKGLCSEL 1121