BLASTX nr result
ID: Catharanthus23_contig00030110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00030110
(376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containi... 167 2e-39
ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containi... 159 4e-37
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi... 157 1e-36
gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis] 155 5e-36
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr... 149 4e-34
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi... 149 5e-34
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei... 148 8e-34
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 144 9e-33
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus... 143 3e-32
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe... 143 3e-32
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi... 142 6e-32
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi... 141 8e-32
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr... 129 5e-28
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]... 127 2e-27
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali... 127 2e-27
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps... 126 3e-27
ref|XP_002875182.1| pentatricopeptide repeat-containing protein ... 122 4e-26
ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [A... 114 1e-23
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ... 103 3e-20
>ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Solanum lycopersicum]
Length = 605
Score = 167 bits (422), Expect = 2e-39
Identities = 81/124 (65%), Positives = 97/124 (78%)
Frame = -3
Query: 374 RKDCIPEAVQPLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMH 195
RKD + PL+L+ KC SLR++KQIQAF IKT LQNDIF M K+IN CT NP+ + M+
Sbjct: 24 RKDTFTP-IDPLALVPKCKSLRDLKQIQAFSIKTQLQNDIFFMSKLINFCTKNPTPACMY 82
Query: 194 HAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACA 15
HAHLLFD+IPQPDI+LFN +ARGYAHS+TPL + LF+KI G+VPD YTFPSLLKACA
Sbjct: 83 HAHLLFDKIPQPDIVLFNFLARGYAHSDTPLNAFVLFLKILTLGVVPDFYTFPSLLKACA 142
Query: 14 KMNA 3
A
Sbjct: 143 GAEA 146
>ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Solanum tuberosum]
Length = 605
Score = 159 bits (402), Expect = 4e-37
Identities = 77/124 (62%), Positives = 95/124 (76%)
Frame = -3
Query: 374 RKDCIPEAVQPLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMH 195
RKD + PL+L+ KC SLR++KQIQAF IKT +QNDIF M K+IN CT NP+ + M+
Sbjct: 24 RKDTFTP-IDPLALVPKCKSLRDLKQIQAFSIKTQMQNDIFFMSKLINFCTKNPTPAFMY 82
Query: 194 HAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACA 15
HAHLLFD+IPQP+I+LFN +A GYA S+TPL + LF+KI G+VPD YTFPSLLKACA
Sbjct: 83 HAHLLFDKIPQPNIVLFNFLAHGYARSDTPLNAFVLFLKILTLGVVPDFYTFPSLLKACA 142
Query: 14 KMNA 3
A
Sbjct: 143 GAEA 146
Score = 55.5 bits (132), Expect = 7e-06
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Frame = -3
Query: 362 IPEAVQPLSLLSKC---NSLREIKQIQAFLIKTHLQNDIFAMKKIINC---CTFNPSTSK 201
+P+ SLL C +L E KQ+ LIK L+ D++ ++N C N S
Sbjct: 128 VPDFYTFPSLLKACAGAEALEEGKQLHCLLIKYGLKGDMYVCPALMNMYIECKDNGS--- 184
Query: 200 MHHAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKA 21
A +FD+I P ++ +N + GY S P ++L LF ++Q I P + T ++ +
Sbjct: 185 ---ARRVFDRIADPCVVTYNAIIMGYVRSSEPNKALLLFRELQVKKIKPSDVTILGVVSS 241
Query: 20 CA 15
CA
Sbjct: 242 CA 243
>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
protein product [Vitis vinifera]
Length = 595
Score = 157 bits (397), Expect = 1e-36
Identities = 73/114 (64%), Positives = 89/114 (78%)
Frame = -3
Query: 344 PLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIP 165
PLSLL KC SLRE+KQ+QAF IKTHL +D+ + K IN C+ NP+T+ M HAH LFDQIP
Sbjct: 23 PLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIP 82
Query: 164 QPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
QPDI+LFN MARGYA ++TPL++ LF +I G+ PD+YTFPSLLKACA A
Sbjct: 83 QPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKA 136
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/113 (30%), Positives = 61/113 (53%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
L + C +L E +Q+ IK L +++ +IN T + ++M A +FD+I +
Sbjct: 128 LKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYT---ACNEMDCARRVFDKIWE 184
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
P ++ +N M GYA P ++L+LF ++Q + P + T S+L +CA + A
Sbjct: 185 PCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGA 237
>gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]
Length = 594
Score = 155 bits (392), Expect = 5e-36
Identities = 76/114 (66%), Positives = 89/114 (78%)
Frame = -3
Query: 344 PLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIP 165
PLSLL KC SL E+KQIQAF IKTHLQNDI + K+IN CT +P+ M HA LFDQIP
Sbjct: 23 PLSLLPKCTSLMELKQIQAFSIKTHLQNDISVVAKLINFCTLSPTPGFMGHAQHLFDQIP 82
Query: 164 QPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
QPD+I+FN MARGYA SETPL+++ALF + GI+PD+YTFPSLLKACA A
Sbjct: 83 QPDVIVFNTMARGYARSETPLRAIALFAQTLSNGILPDDYTFPSLLKACASSKA 136
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Frame = -3
Query: 338 SLLSKCNS---LREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQI 168
SLL C S L E KQ+ + +K L +I+ +IN T + + +H A FD I
Sbjct: 126 SLLKACASSKALEEGKQLHSLALKHGLGLNIYVCPTLINMYT---ACNDVHFARRFFDMI 182
Query: 167 PQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
+P I+++N + GYA + P ++LALF ++Q + P + T S+L CA + A
Sbjct: 183 DEPCIVMYNAIITGYARNSLPNEALALFRELQVTEVKPTDVTMLSVLSCCALLGA 237
>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
gi|568859243|ref|XP_006483151.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Citrus sinensis]
gi|557540892|gb|ESR51936.1| hypothetical protein
CICLE_v10031011mg [Citrus clementina]
Length = 598
Score = 149 bits (376), Expect = 4e-34
Identities = 69/113 (61%), Positives = 91/113 (80%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
LSLL +C S R +KQI A IKTHLQND+ + K+IN CT NP+TS M HAHLLFD+IP+
Sbjct: 25 LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPE 84
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
PDI+LFN MARGY+ S+TP++++ LFV++ G++PD+Y+FPSLLKACA + A
Sbjct: 85 PDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGA 137
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Frame = -3
Query: 362 IPEAVQPLSLLSKC-----NSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKM 198
+P+ SLL C +L E KQ+ F IK L ++++ +IN S +
Sbjct: 119 LPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLIN---LYAECSDV 175
Query: 197 HHAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKAC 18
A +F+ I +P ++ +N + YA S P ++L+LF ++Q + P + T S L +C
Sbjct: 176 EAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSC 235
Query: 17 AKMNA 3
A + +
Sbjct: 236 ALLGS 240
>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 149 bits (375), Expect = 5e-34
Identities = 72/124 (58%), Positives = 92/124 (74%)
Frame = -3
Query: 374 RKDCIPEAVQPLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMH 195
+ + + + PLSLLSKC SL E+KQIQA+ IKT+LQ+DI + K+IN CT NP+TS M
Sbjct: 22 KNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMD 81
Query: 194 HAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACA 15
HAH LFDQI DIILFN+MARGYA S +P + +LF ++ C G++PD+YTF SLLKACA
Sbjct: 82 HAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACA 141
Query: 14 KMNA 3
A
Sbjct: 142 SSKA 145
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = -3
Query: 362 IPEAVQPLSLLSKCNS---LREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHH 192
+P+ SLL C S LRE + F +K L ++I+ +IN + M+
Sbjct: 127 LPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYA---ECNDMNA 183
Query: 191 AHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAK 12
A +FD++ QP I+ +N + GYA S P ++L+LF ++Q I P + T S++ +CA
Sbjct: 184 ARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCAL 243
Query: 11 MNA 3
+ A
Sbjct: 244 LGA 246
>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 604
Score = 148 bits (373), Expect = 8e-34
Identities = 69/114 (60%), Positives = 88/114 (77%)
Frame = -3
Query: 344 PLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIP 165
PLSLL KC SLRE+KQIQAF IKTHLQNDI + K+IN CT NP+ + M +AH +FD++
Sbjct: 32 PLSLLPKCASLREVKQIQAFAIKTHLQNDITFLTKLINFCTKNPTFTSMEYAHKVFDKVS 91
Query: 164 QPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
QPDI+LFN MARGY+ S TP Q++ L ++ FG +PD+YTFPS+LKAC+ A
Sbjct: 92 QPDIVLFNTMARGYSRSNTPTQAIPLVSQLLSFGFLPDDYTFPSVLKACSSSKA 145
Score = 58.2 bits (139), Expect = 1e-06
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = -3
Query: 338 SLLSKCNS---LREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQI 168
S+L C+S L E KQI +IK L ++I+ +I+ T + + A +FD++
Sbjct: 135 SVLKACSSSKALEEGKQIHCLVIKLGLNHNIYICPSLISMYT---ECNDLDSARRVFDKM 191
Query: 167 PQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
P +I +N + GYA P ++L+LF ++Q + P + T S+L CA + A
Sbjct: 192 LDPCVISYNAIITGYAKCSRPNEALSLFRELQVKSLKPTDVTMLSVLSCCALLGA 246
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 144 bits (364), Expect = 9e-33
Identities = 67/113 (59%), Positives = 87/113 (76%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
LS L KC SL+E+KQIQAF IKTHLQND+ + K+IN CT NP+T+ M +AH LF+ IPQ
Sbjct: 30 LSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQ 89
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
PDI+LFN M RGY+ S PL++++LF+K + ++PD+YTFPSLLKAC A
Sbjct: 90 PDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKA 142
>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
Length = 600
Score = 143 bits (360), Expect = 3e-32
Identities = 66/113 (58%), Positives = 87/113 (76%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
LSL+ KC SLRE+KQIQA+ IKTHL N + K+IN CT NP+T+ M +AH +FDQIPQ
Sbjct: 29 LSLIPKCTSLRELKQIQAYTIKTHLHNSGTVLTKLINFCTCNPTTASMDYAHQMFDQIPQ 88
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
PDI+LFN MARGYA + PL+++ LF ++ G++PD+YTF SL KACA++ A
Sbjct: 89 PDIVLFNTMARGYARFDDPLRAILLFSQVLFSGLLPDDYTFSSLFKACARLKA 141
>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
Length = 593
Score = 143 bits (360), Expect = 3e-32
Identities = 68/114 (59%), Positives = 84/114 (73%)
Frame = -3
Query: 344 PLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIP 165
P+SL+ KC SLRE+KQIQAF IKTHLQ DI + K+IN CT NP+ + M +AH LFDQIP
Sbjct: 21 PVSLIPKCTSLRELKQIQAFSIKTHLQYDISVLTKLINFCTLNPTGTSMDYAHHLFDQIP 80
Query: 164 QPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
PDI++FN MARGYA S P ++++LF I + PD+YTF SLLKACA A
Sbjct: 81 HPDIVVFNTMARGYARSHAPFRAISLFAHILSSDLFPDDYTFASLLKACASSKA 134
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Frame = -3
Query: 368 DCIPEAVQPLSLLSKCNS---LREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKM 198
D P+ SLL C S L E +Q+ F IK L +I+ +IN T + +
Sbjct: 114 DLFPDDYTFASLLKACASSKALEEGRQLHCFAIKCGLHLNIYVCPTLINMYT---ECNDV 170
Query: 197 HHAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKAC 18
A +FD+IP P +++ N M +GYA S P ++LALF ++Q + P + T S L +C
Sbjct: 171 DAARRVFDKIPDPCVVVHNAMIKGYARSSRPNEALALFRELQASNLKPTDVTMLSALSSC 230
Query: 17 AKMNA 3
A + A
Sbjct: 231 ALLGA 235
>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 593
Score = 142 bits (357), Expect = 6e-32
Identities = 64/113 (56%), Positives = 86/113 (76%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
+SL+ KC SL +++QIQAF IKTHLQ D+ + K+IN CT NP+ + M +AH LFDQIP
Sbjct: 22 ISLIPKCTSLTQLQQIQAFSIKTHLQYDLSVLSKLINSCTLNPTATSMDYAHQLFDQIPH 81
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
PDI++FN MARGY+ S TP ++++LF ++ GI PD+YTFP+LLKACA A
Sbjct: 82 PDIVVFNTMARGYSRSTTPFRAISLFSQVLSSGIFPDDYTFPALLKACAACKA 134
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/113 (34%), Positives = 64/113 (56%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
L + C +L E KQ+ ++IK +Q +IF +IN T S + A +FD++P+
Sbjct: 126 LKACAACKALEEGKQLHCYVIKCGMQLNIFVCPALINMYT---ECSAVDVARQVFDKMPE 182
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
P +++ N M GYA + P ++LALF ++Q G+ P + T S L +CA + A
Sbjct: 183 PCVVVHNAMITGYARNSRPNEALALFRELQASGLKPTDVTMLSALSSCALLGA 235
>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 141 bits (356), Expect = 8e-32
Identities = 67/119 (56%), Positives = 90/119 (75%)
Frame = -3
Query: 359 PEAVQPLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLL 180
P + LSL+ KC SLRE+KQIQA+ IKTH QN+ + K+IN CT NP+ + M HAH +
Sbjct: 33 PPSSSILSLIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKLINFCTSNPTIASMDHAHRM 91
Query: 179 FDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
FD+IPQPDI+LFN MARGYA + PL+++ L ++ C G++PD+YTF SLLKACA++ A
Sbjct: 92 FDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKA 150
>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cicer arietinum]
Length = 602
Score = 129 bits (325), Expect = 3e-28
Identities = 60/113 (53%), Positives = 82/113 (72%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
LS + KC +L+E+KQIQA+ IKTH N+ + K+IN CT P+T+ M +AH LFD+I
Sbjct: 31 LSFIPKCTTLKELKQIQAYTIKTHQHNNTNFITKLINFCTSKPTTASMDYAHQLFDKITL 90
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
PDI+LFN MARGYA PL+++ LF + C G++PD+YTF SLLK C+K+ A
Sbjct: 91 PDIVLFNSMARGYARFNDPLRAIILFSHVLCNGLLPDDYTFSSLLKVCSKVKA 143
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/113 (28%), Positives = 60/113 (53%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
L + SK +L E KQ+ F +K + N+++ + +IN T S + A +FD+I +
Sbjct: 135 LKVCSKVKALEEGKQLHCFALKLGVGNNMYVVPTLINMYT---SCGDIDAARRVFDKIDE 191
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
P ++ +N + A + P ++LALF +Q G+ + T +L +CA + +
Sbjct: 192 PCVVAYNAIIMSLARNSQPNEALALFRDLQESGLKATDVTMLVVLSSCALLGS 244
>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
gi|557092383|gb|ESQ33030.1| hypothetical protein
EUTSA_v10003852mg [Eutrema salsugineum]
Length = 605
Score = 129 bits (323), Expect = 5e-28
Identities = 62/115 (53%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
Frame = -3
Query: 344 PLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIP 165
P+ L+S+C SLRE+ QIQ + IK+HL D+ + K+IN CT P+TS M +A LFD +P
Sbjct: 32 PILLISRCTSLRELMQIQGYAIKSHLHEDVSFITKLINFCTEYPTTSSMSYARQLFDAMP 91
Query: 164 QPDIILFNLMARGYAHSETPLQSLALFVKI-QCFGIVPDNYTFPSLLKACAKMNA 3
+PDI++FN MARGY+ S TPL++ +LFV+I + ++PD YTFPSLLKACA A
Sbjct: 92 EPDIVVFNSMARGYSRSTTPLEAFSLFVEILEDDYLLPDGYTFPSLLKACAAAKA 146
Score = 55.5 bits (132), Expect = 7e-06
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Frame = -3
Query: 362 IPEAVQPLSLLSKC---NSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHH 192
+P+ SLL C +L E +Q+ +K L ++I+ +IN T +
Sbjct: 128 LPDGYTFPSLLKACAAAKALEEGRQLHCLSMKLGLDDNIYVCPTLINMYT---ECEDVDA 184
Query: 191 AHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAK 12
A +FD I +P ++ +N M GYA P ++L+LF ++Q + P+ T S+L +C+
Sbjct: 185 ARCVFDGIVEPCVVSYNAMITGYARRNRPNEALSLFREMQGKNLKPNEVTLLSVLSSCSL 244
Query: 11 MNA 3
+ +
Sbjct: 245 LGS 247
>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
[Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
editing factor OTP85 [Arabidopsis thaliana]
Length = 603
Score = 127 bits (318), Expect = 2e-27
Identities = 62/114 (54%), Positives = 85/114 (74%)
Frame = -3
Query: 344 PLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIP 165
P+ L+SKCNSLRE+ QIQA+ IK+H++ D+ + K+IN CT +P+ S M +A LF+ +
Sbjct: 32 PILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 164 QPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
+PDI++FN MARGY+ PL+ +LFV+I GI+PDNYTFPSLLKACA A
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -3
Query: 338 SLLSKC---NSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQI 168
SLL C +L E +Q+ +K L ++++ +IN T + A +FD+I
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT---ECEDVDSARCVFDRI 190
Query: 167 PQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
+P ++ +N M GYA P ++L+LF ++Q + P+ T S+L +CA + +
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGS 245
>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 127 bits (318), Expect = 2e-27
Identities = 62/114 (54%), Positives = 85/114 (74%)
Frame = -3
Query: 344 PLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIP 165
P+ L+SKCNSLRE+ QIQA+ IK+H++ D+ + K+IN CT +P+ S M +A LF+ +
Sbjct: 32 PILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 164 QPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
+PDI++FN MARGY+ PL+ +LFV+I GI+PDNYTFPSLLKACA A
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -3
Query: 338 SLLSKC---NSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQI 168
SLL C +L E +Q+ +K L ++++ +IN T + A +FD+I
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT---ECEDVDSARXVFDRI 190
Query: 167 PQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
+P ++ +N M GYA P ++L+LF ++Q + P+ T S+L +CA + +
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGS 245
>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
gi|482559454|gb|EOA23645.1| hypothetical protein
CARUB_v10016843mg [Capsella rubella]
Length = 630
Score = 126 bits (316), Expect = 3e-27
Identities = 59/116 (50%), Positives = 82/116 (70%)
Frame = -3
Query: 350 VQPLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQ 171
+ P+ +S+C SLRE+ QIQ + IK+HL D+ + K+IN CT +P+ S M +A LFD
Sbjct: 56 LNPILQISRCKSLRELMQIQGYAIKSHLHEDVSFITKLINFCTESPTESSMSYARHLFDA 115
Query: 170 IPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
+ +PDI++FN MARGY+ S TPL + +LF +I ++PDNYTFPSLLKACA A
Sbjct: 116 MSEPDIVIFNSMARGYSRSTTPLDAFSLFAEILGGDLLPDNYTFPSLLKACAVAKA 171
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Frame = -3
Query: 368 DCIPEAVQPLSLLSKC---NSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKM 198
D +P+ SLL C +L E +Q+ +K L ++++ +IN T +
Sbjct: 151 DLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT---ECEDV 207
Query: 197 HHAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKAC 18
A +FD+I +P ++ +N M GYA P ++L+LF ++Q + P+ T S+L +C
Sbjct: 208 DSARCVFDRIVEPCVVCYNAMITGYAKRNRPNEALSLFREMQGKSLKPNEITLLSVLSSC 267
Query: 17 AKMNA 3
A + +
Sbjct: 268 ALLGS 272
>ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321020|gb|EFH51441.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 605
Score = 122 bits (307), Expect = 4e-26
Identities = 62/119 (52%), Positives = 82/119 (68%)
Frame = -3
Query: 359 PEAVQPLSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLL 180
P P+ L+SKCNS RE+ QIQA+ IK+H Q D+ K+IN CT +P+ S M +A L
Sbjct: 29 PNPPNPILLISKCNSERELMQIQAYAIKSH-QEDVSFNTKLINFCTESPTESSMSYARHL 87
Query: 179 FDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
FD + +PDI++FN +ARGY+ S PL+ LFV+I ++PDNYTFPSLLKACA A
Sbjct: 88 FDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKA 146
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Frame = -3
Query: 368 DCIPEAVQPLSLLSKC---NSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKM 198
D +P+ SLL C +L E +Q+ +K + ++++ +IN T +
Sbjct: 126 DLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYT---ECEDV 182
Query: 197 HHAHLLFDQIPQPDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKAC 18
A +FD+I +P ++ +N M GYA P ++L+LF ++Q + P+ T S+L +C
Sbjct: 183 DAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSC 242
Query: 17 AKMNA 3
A + +
Sbjct: 243 ALLGS 247
>ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [Amborella trichopoda]
gi|548831685|gb|ERM94493.1| hypothetical protein
AMTR_s00010p00262470 [Amborella trichopoda]
Length = 354
Score = 114 bits (286), Expect = 1e-23
Identities = 57/113 (50%), Positives = 79/113 (69%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
LSLLS+C +L ++KQIQA IKTHLQN + K+ + C+ + + +A LFDQIP+
Sbjct: 29 LSLLSRCATLSQLKQIQANTIKTHLQNHAPTLSKLASFCSLS-LPEHIEYAQQLFDQIPE 87
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
P+ +LFN + R Y+ S TP+Q++ LFVK+ I PDNYTFPS+LKACA +A
Sbjct: 88 PNTVLFNTLIRSYSRSHTPIQAINLFVKMLTNNIQPDNYTFPSILKACAMASA 140
>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 586
Score = 103 bits (256), Expect = 3e-20
Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 23/136 (16%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
+SL+ KC +L+E+KQIQA+ IKT+ QN+ + K IN CT NP+ + M HAH LFDQI Q
Sbjct: 30 ISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQ 89
Query: 161 PDIILFNLMARGYAHSETPLQSLALF----------------VKIQCFGI---VPDN-YT 42
P+I+LFN MARGYA PL+ + F ++ CF + V DN Y
Sbjct: 90 PNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYV 149
Query: 41 FPSLLK---ACAKMNA 3
P+L+ AC ++A
Sbjct: 150 VPTLINMYTACGDIDA 165
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/113 (26%), Positives = 62/113 (54%)
Frame = -3
Query: 341 LSLLSKCNSLREIKQIQAFLIKTHLQNDIFAMKKIINCCTFNPSTSKMHHAHLLFDQIPQ 162
L L+SK +L E KQ+ F +K + ++++ + +IN T + + + +FD+I +
Sbjct: 119 LRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYT---ACGDIDASRRVFDKIDE 175
Query: 161 PDIILFNLMARGYAHSETPLQSLALFVKIQCFGIVPDNYTFPSLLKACAKMNA 3
P ++ +N + A + ++LALF ++Q G+ P + T +L +CA + +
Sbjct: 176 PCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGS 228