BLASTX nr result

ID: Catharanthus23_contig00029752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00029752
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
gb|ESW15257.1| hypothetical protein PHAVU_007G057700g [Phaseolus...    58   1e-06
gb|EOY10376.1| Tetratricopeptide repeat (TPR)-like superfamily p...    58   1e-06
gb|EXC74564.1| hypothetical protein L484_000327 [Morus notabilis]      57   2e-06
gb|EXC01816.1| hypothetical protein L484_021456 [Morus notabilis]      57   2e-06
gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis]      57   2e-06
ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
gb|EPS73044.1| hypothetical protein M569_01710 [Genlisea aurea]        57   3e-06
ref|XP_004954668.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006340539.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [A...    57   3e-06
ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat...    57   3e-06
gb|EMJ26204.1| hypothetical protein PRUPE_ppa020300mg [Prunus pe...    57   3e-06
ref|XP_004231485.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006841563.1| hypothetical protein AMTR_s00003p00182540 [A...    56   4e-06
gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein...    56   4e-06

>ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Solanum tuberosum]
          Length = 786

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/39 (64%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKFIS          D  RFHHFKG  CSCRDYW
Sbjct: 748 DCHSAIKFISKLVGREIILRDATRFHHFKGGFCSCRDYW 786


>gb|ESW15257.1| hypothetical protein PHAVU_007G057700g [Phaseolus vulgaris]
          Length = 685

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/39 (61%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKFIS          DN RFHHFK   CSC+DYW
Sbjct: 647 DCHSAIKFISKIVGREIIVRDNNRFHHFKNGWCSCKDYW 685


>gb|EOY10376.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 720

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 23/39 (58%), Positives = 26/39 (66%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+AIKF+S          DN RFHHFK  +CSCRDYW
Sbjct: 682 DCHTAIKFMSKISQREIIVRDNSRFHHFKDGKCSCRDYW 720


>gb|EXC74564.1| hypothetical protein L484_000327 [Morus notabilis]
          Length = 590

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+AIKFIS          DN RFHHF G +CSC DYW
Sbjct: 552 DCHTAIKFISKIVGREIIVRDNSRFHHFNGGQCSCGDYW 590


>gb|EXC01816.1| hypothetical protein L484_021456 [Morus notabilis]
          Length = 709

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+AIKFIS          DN RFHHF G +CSC DYW
Sbjct: 671 DCHTAIKFISKIVGREIIVRDNSRFHHFNGGQCSCGDYW 709


>gb|EXB63452.1| hypothetical protein L484_005415 [Morus notabilis]
          Length = 678

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/39 (61%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKFIS          DN RFH FK  +CSCRDYW
Sbjct: 640 DCHSAIKFISGIVGREIIVRDNNRFHQFKDGKCSCRDYW 678


>ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum tuberosum]
          Length = 628

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 24/39 (61%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH A KFIS          D  RFHHFKG ECSC+DYW
Sbjct: 590 DCHQASKFISKVYDREIIVRDRNRFHHFKGGECSCKDYW 628


>ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum lycopersicum]
          Length = 626

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 24/39 (61%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH A KFIS          D  RFHHFKG ECSC+DYW
Sbjct: 588 DCHQASKFISKVYNLEIIVRDRNRFHHFKGGECSCKDYW 626


>gb|EPS73044.1| hypothetical protein M569_01710 [Genlisea aurea]
          Length = 684

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/39 (56%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKF+S          DN R+HHF+ N CSC DYW
Sbjct: 646 DCHSAIKFVSGIVEREIVVRDNNRYHHFRDNRCSCGDYW 684


>ref|XP_004954668.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Setaria italica]
          Length = 691

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 24/39 (61%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH A KFIS          DN RFHHFK  ECSC+DYW
Sbjct: 653 DCHRAFKFISAIVGREIIVRDNNRFHHFKNYECSCKDYW 691


>ref|XP_006340539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Solanum tuberosum]
          Length = 687

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKFIS          DN RFH FK  +CSCRDYW
Sbjct: 649 DCHSAIKFISGITGREIIVRDNNRFHSFKDYQCSCRDYW 687


>ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [Amborella trichopoda]
           gi|548843439|gb|ERN03093.1| hypothetical protein
           AMTR_s00003p00032470 [Amborella trichopoda]
          Length = 791

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 22/39 (56%), Positives = 26/39 (66%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+A+KF+S          D +RFHHFK  ECSCRDYW
Sbjct: 753 DCHTAMKFMSKVVEREIIVRDGKRFHHFKHGECSCRDYW 791


>ref|XP_004296377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 24/39 (61%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+A K IS          DN RFHHFKG ECSC DYW
Sbjct: 655 DCHTATKLISKIVGREIIVRDNNRFHHFKGGECSCGDYW 693


>gb|EMJ26204.1| hypothetical protein PRUPE_ppa020300mg [Prunus persica]
          Length = 671

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/39 (58%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+AIKF+S          DN RFHHFK  ECSC DYW
Sbjct: 633 DCHAAIKFMSKIVGREMIVRDNSRFHHFKDGECSCGDYW 671


>ref|XP_004231485.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Solanum lycopersicum]
          Length = 687

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 25/39 (64%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKFIS          DN RFH FK  +CSCRDYW
Sbjct: 649 DCHSAIKFISGITGREIVVRDNNRFHSFKDYQCSCRDYW 687


>ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 24/39 (61%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKFIS          D  RFHHFK   CSCRDYW
Sbjct: 744 DCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 22/39 (56%), Positives = 26/39 (66%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+AIKF+S          D +RFHHFK  ECSCR+YW
Sbjct: 759 DCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797


>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 24/39 (61%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKFIS          D  RFHHFK   CSCRDYW
Sbjct: 744 DCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782


>ref|XP_006841563.1| hypothetical protein AMTR_s00003p00182540 [Amborella trichopoda]
           gi|548843584|gb|ERN03238.1| hypothetical protein
           AMTR_s00003p00182540 [Amborella trichopoda]
          Length = 689

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/39 (56%), Positives = 26/39 (66%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCH+A+KF+S          D +RFHHFK  ECSCRDYW
Sbjct: 651 DCHTAMKFMSKVVEREIIVRDGKRFHHFKYGECSCRDYW 689


>gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508781793|gb|EOY29049.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 675

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 22/39 (56%), Positives = 24/39 (61%)
 Frame = +3

Query: 3   DCHSAIKFISXXXXXXXXXXDNRRFHHFKGNECSCRDYW 119
           DCHSAIKF+S          D  RFHHF+G  CSC DYW
Sbjct: 637 DCHSAIKFVSQVVRREIIVRDTNRFHHFRGGSCSCGDYW 675


Top