BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00029152
         (795 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   349   6e-94
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   347   2e-93
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              326   5e-87
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   326   5e-87
gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily p...   322   9e-86
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   321   2e-85
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     313   6e-83
gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [...   312   1e-82
ref|XP_002889338.1| pentatricopeptide repeat-containing protein ...   301   1e-79
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi...   301   2e-79
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   300   4e-79
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   300   4e-79
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...   300   5e-79
gb|ESW10402.1| hypothetical protein PHAVU_009G206300g [Phaseolus...   299   7e-79
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi...   298   2e-78
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi...   298   2e-78
ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containi...   298   2e-78
ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutr...   296   7e-78
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   295   1e-77
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   293   6e-77

>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  349 bits (896), Expect = 6e-94
 Identities = 165/234 (70%), Positives = 203/234 (86%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           +AR +A +INT+ WS+ LE+S++ L QP +S TTVLHTLR IK P KAL FF W  + GF
Sbjct: 55  KARNIASIINTNPWSSHLESSLSSLTQPSLSHTTVLHTLRFIKIPFKALYFFNWTQKMGF 114

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            HT QSYLLMLQLL + R+ N+ARNFLLSIP++SNG V L D++FN LI+++G+AGLF+E
Sbjct: 115 QHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGTVPLQDRYFNTLIQSYGKAGLFQE 174

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           SLKVF+ MKS+G+SPS VTFNSLFSIL +RGRTG+V+EL+DE+LKT+G KPD+YTFNILI
Sbjct: 175 SLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILI 234

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFCMNSMVD+GF+FFKEM+  +CEPDVITYNTIVDGLCRAGKV+IAHNV+KGM
Sbjct: 235 RGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGM 288



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = +1

Query: 406 FNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELL 585
           FN LIR F    +  +  + F+ M+     P  +T+N++   L R G+  I   +   ++
Sbjct: 230 FNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMV 289

Query: 586 KT-YGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGK 762
           K  + + P++ ++  L+RG+C    V+     F+EM     +P  ITYNT+V GLC A +
Sbjct: 290 KRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKR 349

Query: 763 VKIAHNVMKG 792
                 +++G
Sbjct: 350 FDRIKEILEG 359



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 44/157 (28%), Positives = 76/157 (48%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N L  + K+ +  +  +   +  L+R + E    + +L VF
Sbjct: 264 TYNTIVDGLCRAGKVEIAHNVLKGMVKRGH-QLSPNVVSYTTLVRGYCEKQEVERALDVF 322

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M   G+ P+++T+N+L   L    R   + E+ +  L + G+ PD  TFN LI   C 
Sbjct: 323 EEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITFHCN 382

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAG 759
              +DE  K F+ M   K +PD  TY+ ++   C+ G
Sbjct: 383 VGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKG 419



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 6/208 (2%)
 Frame = +1

Query: 181 ISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTARNFLLS 360
           +S TT++      +   +AL  F      G   T  +Y  ++Q LC  + F+  +  L  
Sbjct: 300 VSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEG 359

Query: 361 IPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFR 540
                +G +  D   FN LI      G   E++KVF+ M  + V P + T++ L     +
Sbjct: 360 T--LGSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQ 417

Query: 541 RGRTGIVFELYDELLKTY------GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFK 702
           +G      +L+D+L+K        G  P +  +N +   FC      +  K F+++   +
Sbjct: 418 KGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQL-MRR 476

Query: 703 CEPDVITYNTIVDGLCRAGKVKIAHNVM 786
              D   Y  ++ G C+ G    AH ++
Sbjct: 477 GTQDPFAYELLIMGHCKEGTFNDAHELL 504


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  347 bits (891), Expect = 2e-93
 Identities = 163/234 (69%), Positives = 205/234 (87%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           +AR +A +INT+ WS+ LE+S++ + QP +S TTVLHTLR IK PSKAL FF W  + GF
Sbjct: 49  KARKIATIINTNPWSSHLESSLSSITQPSLSHTTVLHTLRFIKIPSKALYFFNWTQKMGF 108

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            HT QSYLLMLQLL + R+ N+ARNFLLSIP++SNGAV L D++FN LI+++G+AGLF+E
Sbjct: 109 QHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGAVPLQDRYFNTLIQSYGKAGLFQE 168

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           SLKVF+ MKS+G+SPS VTFNSLF+IL +RGRTG+V+EL+DE+LKT+G KPD+YTFNILI
Sbjct: 169 SLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILI 228

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFC+NSMVD+GF+FFKEM+  +CEP+VITYNTIVDGLCRAGKV+IAHNV+KGM
Sbjct: 229 RGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGM 282



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = +1

Query: 406 FNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELL 585
           FN LIR F    +  +  + F+ M+     P+ +T+N++   L R G+  I   +   + 
Sbjct: 224 FNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMA 283

Query: 586 KT-YGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGK 762
           K  + + P++ ++  L+RG+C    V+     F+EM     +P  ITYNT+V GLC A +
Sbjct: 284 KRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKR 343

Query: 763 VKIAHNVMKG 792
                 +++G
Sbjct: 344 FDRIKEILEG 353



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 44/157 (28%), Positives = 76/157 (48%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N L  + K+ +  +  +   +  L+R + E    + +L VF
Sbjct: 258 TYNTIVDGLCRAGKVEIAHNVLKGMAKRGH-QLSPNVVSYTTLVRGYCEKQEVERALDVF 316

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M   G+ P+++T+N+L   L    R   + E+ +  L + G+ PD  TFN LI   C 
Sbjct: 317 EEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCN 376

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAG 759
              +DE  K F+ M   K +PD  TY+ ++   C+ G
Sbjct: 377 VGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKG 413



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 6/208 (2%)
 Frame = +1

Query: 181 ISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTARNFLLS 360
           +S TT++      +   +AL  F      G   T  +Y  ++Q LC  + F+  +  L  
Sbjct: 294 VSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEG 353

Query: 361 IPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFR 540
                +G +  D   FN LI      G   E++KVF+ M  + V P + T++ L     +
Sbjct: 354 T--LGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQ 411

Query: 541 RGRTGIVFELYDELLKTY------GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFK 702
           +G      +L+D+L+K        G  P +  +N +   FC      +  K F+++   +
Sbjct: 412 KGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQL-MRR 470

Query: 703 CEPDVITYNTIVDGLCRAGKVKIAHNVM 786
              D   Y  ++ G C+ G    AH ++
Sbjct: 471 GTQDPFAYELLIRGHCKEGTFNDAHGLL 498



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
 Frame = +1

Query: 406 FNCLIRAFGEAGLFKESLKVFQ-TMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDEL 582
           +N L++   EA  F    ++ + T+ S G+ P   TFN+L +     G      ++++ +
Sbjct: 331 YNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENM 390

Query: 583 LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFK-------CEPDVITYNTIVD 741
           L    VKPD  T++ILIR FC     D   K F ++   +       C P +  YN + +
Sbjct: 391 LYLK-VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFE 449

Query: 742 GLCRAGKVKIAHNVMK 789
             C+ GK K A  V +
Sbjct: 450 YFCKIGKTKKAEKVFR 465


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  326 bits (836), Expect = 5e-87
 Identities = 159/234 (67%), Positives = 192/234 (82%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           R++ MARLINT  WS +L++S+A+LA P +S+TTVL TL+LI+TP+KAL FF W    GF
Sbjct: 65  RSQAMARLINTEPWSHELQSSLAELA-PSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGF 123

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            H  QSY LM+++L   RN N ARNF+ SI KKS GAV+L D+ FN LIR++G AGLF+E
Sbjct: 124 THNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQE 183

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S+KVF+TMK IGVSPS VTFNSL SI+ +RGRT +  +L+DE+L TYGV PD YTFNILI
Sbjct: 184 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILI 243

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFCMNSMVDEGF FFKEM  FKC+PDV+TYNT+VDGLCRAGKVKIAHNV+KGM
Sbjct: 244 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGM 297



 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
 Frame = +1

Query: 394 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY 573
           D   FN LIR F    +  E    F+ M      P  VT+N+L   L R G+  I   + 
Sbjct: 235 DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294

Query: 574 DELLK-TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
             ++K +  + P++ T+  LIRG+CM   + E      EM S   +P+ ITYNT++ GLC
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354

Query: 751 RAGKVKIAHNVMKGM 795
            A K+     +++GM
Sbjct: 355 EAQKLDKIKEILEGM 369



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 43/162 (26%), Positives = 76/162 (46%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N +  + KKS   +  +   +  LIR +       E+L + 
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN-LSPNVVTYTTLIRGYCMKQDMAEALSLL 331

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
             M S G+ P+ +T+N+L   L    +   + E+ + ++   G  PD  T N LI+  C 
Sbjct: 332 AEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCT 391

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIA 774
              ++E F  F++M   + +PD  TY+ +V  LC+ G  + A
Sbjct: 392 MGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
 Frame = +1

Query: 163 DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 342
           +L+   ++ TT++    + +  ++AL         G      +Y  ++Q LC  +  +  
Sbjct: 303 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362

Query: 343 RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 522
           +  L  +    +G    D    N LI+A    G  +E+  VF+ M  + V P + T++ L
Sbjct: 363 KEILEGMV--GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 420

Query: 523 FSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 684
              L +RG      E +DE      LL   G KP +  +N +    C N    +  + F+
Sbjct: 421 VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 480

Query: 685 EMDSFKCEPDVITYNTIVDGLCRAG 759
           ++   +   D  +Y T++ G CR G
Sbjct: 481 QLMK-RGTQDPPSYKTLILGHCREG 504


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  326 bits (836), Expect = 5e-87
 Identities = 159/234 (67%), Positives = 192/234 (82%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           R++ MARLINT  WS +L++S+A+LA P +S+TTVL TL+LI+TP+KAL FF W    GF
Sbjct: 65  RSQAMARLINTEPWSHELQSSLAELA-PSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGF 123

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            H  QSY LM+++L   RN N ARNF+ SI KKS GAV+L D+ FN LIR++G AGLF+E
Sbjct: 124 THNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQE 183

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S+KVF+TMK IGVSPS VTFNSL SI+ +RGRT +  +L+DE+L TYGV PD YTFNILI
Sbjct: 184 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILI 243

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFCMNSMVDEGF FFKEM  FKC+PDV+TYNT+VDGLCRAGKVKIAHNV+KGM
Sbjct: 244 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGM 297



 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
 Frame = +1

Query: 394 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY 573
           D   FN LIR F    +  E    F+ M      P  VT+N+L   L R G+  I   + 
Sbjct: 235 DTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVV 294

Query: 574 DELLK-TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
             ++K +  + P++ T+  LIRG+CM   + E      EM S   +P+ ITYNT++ GLC
Sbjct: 295 KGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC 354

Query: 751 RAGKVKIAHNVMKGM 795
            A K+     +++GM
Sbjct: 355 EAQKLDKIKEILEGM 369



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 43/162 (26%), Positives = 76/162 (46%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N +  + KKS   +  +   +  LIR +       E+L + 
Sbjct: 273 TYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN-LSPNVVTYTTLIRGYCMKQDMAEALSLL 331

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
             M S G+ P+ +T+N+L   L    +   + E+ + ++   G  PD  T N LI+  C 
Sbjct: 332 AEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCT 391

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIA 774
              ++E F  F++M   + +PD  TY+ +V  LC+ G  + A
Sbjct: 392 MGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 433



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
 Frame = +1

Query: 163 DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 342
           +L+   ++ TT++    + +  ++AL         G      +Y  ++Q LC  +  +  
Sbjct: 303 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362

Query: 343 RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 522
           +  L  +    +G    D    N LI+A    G  +E+  VF+ M  + V P + T++ L
Sbjct: 363 KEILEGMV--GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVL 420

Query: 523 FSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 684
              L +RG      E +DE      LL   G KP +  +N +    C N    +  + F+
Sbjct: 421 VRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFR 480

Query: 685 EMDSFKCEPDVITYNTIVDGLCRAG 759
           ++   +   D  +Y T++ G CR G
Sbjct: 481 QLMK-RGTQDPPSYKTLILGHCREG 504


>gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 724

 Score =  322 bits (825), Expect = 9e-86
 Identities = 154/234 (65%), Positives = 197/234 (84%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           RA++MAR+IN++ WS++LE+S++ L+ P +S+TTVL TLRLIK PSKALQFF W  + GF
Sbjct: 60  RAKSMARVINSTPWSSELESSLSSLS-PSLSKTTVLQTLRLIKAPSKALQFFDWVQKMGF 118

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            H  QS+ L+L++L   RN N ARN LLSI K+SNG+V+L+D+ FN LIR++G+AGLF+E
Sbjct: 119 PHNAQSFFLILEILGKERNLNAARNLLLSIEKRSNGSVKLEDQFFNSLIRSYGKAGLFQE 178

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S+KVF+TMK IGVSPS V+FN+L  IL +RGRT +   ++DE+L TYGV PD+YTFNILI
Sbjct: 179 SIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFNILI 238

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFCMNSMVDEGF+FFKEM+ FKC+PDV+TYNTIVDGLCRAGKV IA NV++GM
Sbjct: 239 RGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGM 292



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
 Frame = +1

Query: 298 LMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM 477
           L++ LL  GR  N A++    +   S   V  D   FN LIR F    +  E  + F+ M
Sbjct: 201 LLMILLKRGRT-NMAKSVFDEM--LSTYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEM 257

Query: 478 KSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLK-TYGVKPDLYTFNILIRGFCMNS 654
           +     P  VT+N++   L R G+ GI   +   + K +  + P++ T+  L+RG+CM  
Sbjct: 258 ERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVRGYCMKQ 317

Query: 655 MVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
            +DE    FKEM S +  P+ ITYNT++ GL    + +    +++GM
Sbjct: 318 EIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGM 364



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDK--HFNCLIRAFGEAGLFKESLK 462
           +Y  ++  LC       ARN +  + KKS   ++L+     +  L+R +       E+L 
Sbjct: 268 TYNTIVDGLCRAGKVGIARNVVRGMSKKS---LDLNPNVVTYTTLVRGYCMKQEIDEALV 324

Query: 463 VFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGF 642
           VF+ M S  + P+ +T+N+L   L        + E+ + + +     PD  T N LI   
Sbjct: 325 VFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAH 384

Query: 643 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAG 759
           C    +DE    FK M      PD  TY+ I+  LC+ G
Sbjct: 385 CNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRG 423


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  321 bits (823), Expect = 2e-85
 Identities = 154/234 (65%), Positives = 190/234 (81%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           +A++MARLIN+  WS +LE+S++ L+ P IS+TTV   LRLIKTPSKALQFF WA   GF
Sbjct: 56  KAKSMARLINSKPWSTELESSLSSLS-PSISKTTVFEVLRLIKTPSKALQFFNWAPELGF 114

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            H  QSY LML++L   RN N ARNFL SI ++SNG V+L+D+ FN LIR++G+AGLF+E
Sbjct: 115 THNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQE 174

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S++VF +MKS+GVSPS VTFNSL  IL +RGRT +   ++DE+L TYGV PD YTFNILI
Sbjct: 175 SVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILI 234

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFC NSMVDEGF+FFKEM  FKC+PD++TYNT+VDGLCRAGKV IAHNV+ GM
Sbjct: 235 RGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGM 288



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +1

Query: 298 LMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM 477
           L+L LL  GR  N A++    +   S   V  D   FN LIR F +  +  E  + F+ M
Sbjct: 197 LLLILLKRGRT-NMAQSVFDEM--LSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEM 253

Query: 478 KSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLK-TYGVKPDLYTFNILIRGFCMNS 654
                 P  VT+N+L   L R G+  I   + + ++K +  + PD+ T+  L+RG+CM  
Sbjct: 254 SRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKH 313

Query: 655 MVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKG 792
            +DE    F+EM S   +P+ ITYNT++ GLC   K+     + +G
Sbjct: 314 EIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEG 359



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 42/165 (25%), Positives = 77/165 (46%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC     N A N +  + KKS   +  D   +  L+R +       E+L VF
Sbjct: 264 TYNTLVDGLCRAGKVNIAHNVVNGMVKKSTN-LNPDVVTYTTLVRGYCMKHEIDEALVVF 322

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M S G+ P+ +T+N+L   L    +   + ++++  L   G  PD  T N L+   C 
Sbjct: 323 EEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCN 382

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNV 783
              +++  + F++M      PD  TY+ ++  LC+ G  + A  +
Sbjct: 383 AGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQL 427



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 8/213 (3%)
 Frame = +1

Query: 181 ISQTTVLHTLRLIKTPSKALQFFYWAYRAG-FVHTPQSYLLMLQLLCAGRNFNTARNFLL 357
           I+  T++  L  ++   K  Q F  A   G F+    +   ++   C   N N A   L 
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDA---LE 391

Query: 358 SIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM-------KSIGVSPSAVTFN 516
              K     V  D   ++ LIR   + G F+ + ++F  +       +  G +P    + 
Sbjct: 392 VFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYK 451

Query: 517 SLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDS 696
           S+F  L R G+T     ++ +L+K     P   +F ILI+G C     + G++    M  
Sbjct: 452 SMFEFLCRNGKTAKAERVFRQLMKRGTQDP--LSFKILIKGHCREGTFEAGYELLVLMLR 509

Query: 697 FKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
               PD+ TY +++DGL + G+  +A+  ++ M
Sbjct: 510 RDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKM 542


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  313 bits (801), Expect = 6e-83
 Identities = 149/234 (63%), Positives = 186/234 (79%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           RA+ M+RLINT+ WS  LE+S++ L   P+S+TTVL TLRLI +PSKA QFF W  + GF
Sbjct: 107 RAKEMSRLINTNPWSTDLESSLSSLFPFPLSKTTVLQTLRLITSPSKAFQFFKWVPQMGF 166

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            H  QS  +ML++L   RN N ARNFL SI KKSNG+V+L+D+ FN LIR++G AGLF+E
Sbjct: 167 SHNDQSCFMMLEILGRSRNLNAARNFLFSIEKKSNGSVKLEDRFFNSLIRSYGNAGLFQE 226

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S+K+F TMK + ++PS VTFNSL  +L +RGRT +   ++DE+L TYGV+PD +TFN+LI
Sbjct: 227 SVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLI 286

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFCMNSMVDEGF FFKEM  FKCEPDV+TYNT+VDGLCRAGKV IA NV+KGM
Sbjct: 287 RGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGM 340



 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
 Frame = +1

Query: 298 LMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTM 477
           L+L LL  GR  N ARN    +       VE D   FN LIR F    +  E    F+ M
Sbjct: 249 LLLVLLKRGRT-NMARNVFDEM--LGTYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEM 305

Query: 478 KSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLK-TYGVKPDLYTFNILIRGFCMNS 654
                 P  VT+N+L   L R G+  I   +   + K +  + P++ T+  LI+G+C   
Sbjct: 306 SRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQ 365

Query: 655 MVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKG 792
            +DE     KEM     +P+ ITYNT++ GLC A K+     ++ G
Sbjct: 366 EIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDG 411



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDK--HFNCLIRAFGEAGLFKESLK 462
           +Y  ++  LC     + ARN +  + KKS   V+L+     +  LI+ +       E+L 
Sbjct: 316 TYNTLVDGLCRAGKVDIARNVVKGMSKKS---VDLNPNIVTYTTLIKGYCGKQEIDEALL 372

Query: 463 VFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGF 642
           V + M   G+ P+ +T+N+L   L    +   V ++ D  ++     P+  TFN LI   
Sbjct: 373 VLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTH 432

Query: 643 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAG 759
           C    +DE  K F++M   +   D  TY+ ++  LC+ G
Sbjct: 433 CQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRG 471



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  +++ LC  +  +  R  L    ++  G    +   FN LI    +AG   E+LKVF
Sbjct: 388 TYNTLIKGLCEAQKLDDVRKILDGTMRR--GEFVPNTCTFNTLIHTHCQAGRLDEALKVF 445

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNIL 630
           + M  + V   + T+++L   L +RG      EL+D+      LL   G +P +  +N +
Sbjct: 446 EKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVAAYNPM 505

Query: 631 IRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 786
               C N    +  + F+++   +   D  +Y T++ G CR G  +  + ++
Sbjct: 506 FEHLCRNGKTKKAERVFRQLMK-RGTQDPPSYKTLIMGHCREGTFEAGYELL 556


>gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  312 bits (799), Expect = 1e-82
 Identities = 150/233 (64%), Positives = 187/233 (80%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+ MARL+NT+ WS++LE+S++ ++   +S+TTV  TL LIKTP KALQFF W    GF 
Sbjct: 49  AKDMARLVNTNTWSSELESSLSTISSS-LSKTTVHQTLHLIKTPHKALQFFKWVEVMGFS 107

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           H  QSY LML++L   RN N ARN L SI K+SNGAV+L+D+ FN LIR +G AGLF+ES
Sbjct: 108 HNDQSYFLMLEILGRARNLNAARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAGLFQES 167

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           +K+F TMKS+GVSPS V+FNSL SIL ++GRT +   +YDE+L  YGV PD YTFNILIR
Sbjct: 168 IKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIR 227

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFCMNSMVDEG++FFK+M  F+C+PDVITYNT+VDGLCRAGKV+IAHNV+ GM
Sbjct: 228 GFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGM 280



 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           S+  +L +L      N A+N    +   S   V  D   FN LIR F    +  E  + F
Sbjct: 185 SFNSLLSILLKKGRTNMAKNVYDEM--LSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFF 242

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYG-VKPDLYTFNILIRGFC 645
           + M      P  +T+N+L   L R G+  I   + + + K  G + P++ T+  LIRG+C
Sbjct: 243 KDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRSGDLTPNVVTYTTLIRGYC 302

Query: 646 MNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKG 792
           +   +D+     +EM +   +P+  TYNT++ GLC A K+     + +G
Sbjct: 303 VKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEG 351



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 40/157 (25%), Positives = 72/157 (45%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N +  + K+S G +  +   +  LIR +       ++L + 
Sbjct: 256 TYNTLVDGLCRAGKVEIAHNVVNGMSKRS-GDLTPNVVTYTTLIRGYCVKQEIDKALSIL 314

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M + G+ P+  T+N+L   L    +   + E+++  +      PD  TFN L+   C 
Sbjct: 315 EEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCN 374

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAG 759
              +DE  K F +M   K  PD  TY+ ++  LC+ G
Sbjct: 375 AGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRG 411



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 6/217 (2%)
 Frame = +1

Query: 163 DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 342
           DL    ++ TT++    + +   KAL         G      +Y  +++ LC  +  +  
Sbjct: 286 DLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKI 345

Query: 343 RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 522
           +           G    D   FN L+ +   AG   E+LKVF  M  + V P + T++ L
Sbjct: 346 KEIFEGT--MIGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVL 403

Query: 523 FSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 684
              L +RG      EL+DE      LL+  G KP + ++N +      N    +  + F+
Sbjct: 404 ICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFR 463

Query: 685 EMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           ++   +   D ++Y T++ G C+ G  +  + ++  M
Sbjct: 464 QL-MRRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWM 499


>ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335180|gb|EFH65597.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 712

 Score =  301 bits (772), Expect = 1e-79
 Identities = 141/234 (60%), Positives = 182/234 (77%), Gaps = 1/234 (0%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADL-AQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           AR++AR +N++ WS +LE+S++ L    P+S+TTVL TLRLIK P+  L+FF W Y  GF
Sbjct: 40  ARSLARAVNSNPWSDELESSLSSLHPSEPLSRTTVLQTLRLIKVPADGLRFFDWVYNKGF 99

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            H  QS+ LML+ L   RN N ARNFL SI K+SNG V+L D++FN LIR++G AGLF+E
Sbjct: 100 SHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQE 159

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S+ +FQTMK +G+SPS +TFNSL SIL +RGRTG+  +++DE+ +TYGV PD YTFN LI
Sbjct: 160 SVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLI 219

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
            GFC NSMVD+ F  FKEM+ + C PDV+TYNTI+DGLCRAGKVKIAHN++ GM
Sbjct: 220 SGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGM 273



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +1

Query: 394 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY 573
           D   FN LI  F +  +  ++  +F+ M+    +P  VT+N++   L R G+  I   L 
Sbjct: 211 DSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLL 270

Query: 574 DELLK-TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
           + +LK    V P++ ++  L+RG+CM   +DE    F EM +   +P+ +TYNT++ GL 
Sbjct: 271 NGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLS 330

Query: 751 RA 756
            A
Sbjct: 331 EA 332



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N L  + KK+  AV  +   +  L+R +       E+L VF
Sbjct: 249 TYNTIIDGLCRAGKVKIAHNLLNGMLKKAT-AVHPNIVSYTTLLRGYCMKQEIDEALLVF 307

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIV--FELYDELLKTYGVKPDLYTFNILIRGF 642
             M + G+ P+AVT+N+L   L    R   +  F +  +   T+   PD  TFNILI+  
Sbjct: 308 HEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFS--PDACTFNILIKAH 365

Query: 643 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
           C    +D   K F+EM + K  PD  +Y+ ++  LC
Sbjct: 366 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 401



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
 Frame = +1

Query: 181 ISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTARNFLLS 360
           +S TT+L    + +   +AL  F+     G      +Y  +++ L     ++  + FL+ 
Sbjct: 285 VSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIG 344

Query: 361 IPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFR 540
               +      D   FN LI+A  +AG    ++KVFQ M ++ + P + +++ L   L  
Sbjct: 345 --GDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCL 402

Query: 541 RGRTGIVFELYDE------LLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFK 702
           R        L++E      LL     KP    +N++    C N    +  K F+++   +
Sbjct: 403 RNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMK-R 461

Query: 703 CEPDVITYNTIVDGLCRAGKVKIAHNVM 786
              D  +Y T++ GLCR GK K A+ ++
Sbjct: 462 GAQDPSSYRTLITGLCREGKFKAAYELL 489


>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cicer arietinum]
          Length = 740

 Score =  301 bits (771), Expect = 2e-79
 Identities = 147/233 (63%), Positives = 179/233 (76%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+T+  LIN   WS  L +S  +     +S+TTVL TLR IK PSKA  FF W +  GF 
Sbjct: 63  AKTIVNLINFKPWSNGLLSSFTN----SLSKTTVLQTLRHIKFPSKAFHFFNWVHENGFS 118

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           H  QSY +ML++L   +N N ARNFL SI K+SNG V+L+D+ FN LIR++GEAGLFKES
Sbjct: 119 HNSQSYFIMLEILGREKNLNVARNFLFSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKES 178

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           +K+FQTMKSIGVSPS +TFNS+  IL RRGRT +  E++DE+L TYGV PD YT+NILIR
Sbjct: 179 IKLFQTMKSIGVSPSVITFNSVLLILLRRGRTNMAKEVFDEMLSTYGVTPDTYTYNILIR 238

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFC NSMVDEGF FFKEM SF C+PDV+TYNT+VDGLCRAGK+K AHN++ GM
Sbjct: 239 GFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGM 291



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
 Frame = +1

Query: 373 SNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRT 552
           S   V  D   +N LIR F +  +  E    F+ M S    P  VT+N+L   L R G+ 
Sbjct: 222 STYGVTPDTYTYNILIRGFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKI 281

Query: 553 GIVFELYDELLKTYG-VKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYN 729
                L + + K  G + PD+ T+  LIRG+CM   V+E     +EM+    +P+++TYN
Sbjct: 282 KTAHNLVNGMSKKCGGLSPDVVTYTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTYN 341

Query: 730 TIVDGLCRAGKVKIAHNVMKGM 795
           T++ GLC A K     ++++ M
Sbjct: 342 TLIKGLCEAQKWDKMKDILEQM 363



 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 43/157 (27%), Positives = 73/157 (46%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC      TA N +  + KK  G +  D   +  LIR +       E+L + 
Sbjct: 267 TYNTLVDGLCRAGKIKTAHNLVNGMSKKCGG-LSPDVVTYTTLIRGYCMKQEVNEALVIL 325

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M   G+ P+ VT+N+L   L    +   + ++ +++    G  PD  TFN LI   C 
Sbjct: 326 EEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKDILEQMKGDSGAIPDACTFNTLINSHCC 385

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAG 759
              +DE FK F+ M   +   D  +Y+ ++  LC+ G
Sbjct: 386 AGNLDEAFKVFENMKKLQVSADSASYSVLIRSLCQIG 422


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  300 bits (768), Expect = 4e-79
 Identities = 147/233 (63%), Positives = 185/233 (79%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+ MA LIN++ WS  L++S++ L+ P IS TTV  TLR IKTPS+A++FF W    GF 
Sbjct: 51  AQAMASLINSTPWSPHLQSSLSSLS-PSISTTTVSQTLRRIKTPSQAIKFFNWVESLGFS 109

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           HT  SY  +L+LL   RN N ARNFL SI K+SNG V+L+DK FN LIR++G AGLF+E+
Sbjct: 110 HTSHSYFTILELLGRNRNLNAARNFLFSIEKRSNGKVKLEDKFFNSLIRSYGAAGLFQEA 169

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           + VF+TMKS+G+S S  +FNSLFS+L +RGRT +V  +YDE+L  YGV+PD +TFNILIR
Sbjct: 170 VNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEMLGMYGVEPDTHTFNILIR 229

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFCM+SMVDEGF FFKEM+ FKCEPDV+TYNT+VDGLCR GKV+IA NV+KGM
Sbjct: 230 GFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGM 282



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
 Frame = +1

Query: 385 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVF 564
           VE D   FN LIR F  + +  E    F+ M+     P  VT+N+L   L R G+  I  
Sbjct: 217 VEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIAR 276

Query: 565 ELYDELLKTYG------VKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITY 726
            +   ++          + P++ T+  LIRG+C+   VDE     +EM S   +P+ ITY
Sbjct: 277 NVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITY 336

Query: 727 NTIVDGLCRAGKVKIAHNVMKG 792
           NT+  GLC A ++     +++G
Sbjct: 337 NTLFKGLCEAKRLDKIKEILEG 358



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKH-----FNCLIRAFGEAGLFKE 453
           +Y  ++  LC       ARN +  +  KS+   EL+  +     +  LIR +       E
Sbjct: 258 TYNTLVDGLCRDGKVEIARNVVKGMMSKSSEG-ELNQLNPNVVTYTTLIRGYCVRQEVDE 316

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           +L V + M S G+ P+ +T+N+LF  L    R   + E+ +  ++  G  PD  TFN L+
Sbjct: 317 ALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLM 376

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
              C+   ++E  K F+ M   K  PD  TY+ ++   C
Sbjct: 377 HSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWC 415


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497542|gb|AES78745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  300 bits (768), Expect = 4e-79
 Identities = 144/233 (61%), Positives = 180/233 (77%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+T+A LIN   WS +L +S        +S+TTV  TLR IK P+KA  FF W +  GF 
Sbjct: 59  AKTIANLINYKPWSDELLSSFTT----SLSKTTVFQTLRHIKVPTKAFLFFNWIHEKGFS 114

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           H PQ+Y +ML++L   +N N ARNFL SI K+SNG V+L+D+ FN LIR++GEAGLFKES
Sbjct: 115 HNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKES 174

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           +K+F+ MK IGVSP  VTFNS+  +L +RGRT +  E+YDE+LKTYGVKPD YT+NILIR
Sbjct: 175 VKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIR 234

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFC NSMVDEGF FFKEM SF C+PDV+TYNT+VDGLCRAGK+K+AHN++ GM
Sbjct: 235 GFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGM 287



 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
 Frame = +1

Query: 385 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVF 564
           V+ D   +N LIR F +  +  E    F+ M S    P  VT+N+L   L R G+  +  
Sbjct: 222 VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAH 281

Query: 565 ELYDELLKTY-GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVD 741
            L + + K    + PD+ T+  LIRG+C    VDE     +EM+    +P+++TYNT++ 
Sbjct: 282 NLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIK 341

Query: 742 GLCRAGK 762
           GLC A K
Sbjct: 342 GLCEAQK 348



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
 Frame = +1

Query: 244 FFYWAYRAGFVHTPQ--SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCL 417
           F+++     F   P   +Y  ++  LC       A N +  + KK    +  D   +  L
Sbjct: 246 FYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKD-LSPDVVTYTTL 304

Query: 418 IRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYG 597
           IR +       E+L + + M   G+ P+ VT+N+L   L    +   + E+ +++    G
Sbjct: 305 IRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGG 364

Query: 598 VKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAG 759
             PD  TFN LI   C    +DE FK F+ M   +   D  +Y+ ++  LC+ G
Sbjct: 365 SIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKG 418



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 6/217 (2%)
 Frame = +1

Query: 163 DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 342
           DL+   ++ TT++      +   +AL         G      +Y  +++ LC  + ++  
Sbjct: 293 DLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKM 352

Query: 343 RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 522
           +  L  +  K +G    D   FN LI +   AG   E+ KVF+ MK + VS  + +++ L
Sbjct: 353 KEILEQM--KGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVL 410

Query: 523 FSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 684
              L ++G  G    L+DE      LL +YG KP   ++  + +  C N    +  +  +
Sbjct: 411 IRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLR 470

Query: 685 EMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           ++   +   D ++Y  ++ G C+ G  +  + ++  M
Sbjct: 471 QLMK-RGTQDPLSYQIVILGHCKEGSYENGYGLLVWM 506


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
           gi|332189251|gb|AEE27372.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  300 bits (767), Expect = 5e-79
 Identities = 142/234 (60%), Positives = 182/234 (77%), Gaps = 1/234 (0%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADL-AQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           AR++AR +N++ WS +LE+S++ L     IS+TTVL TLRLIK P+  L+FF W    GF
Sbjct: 37  ARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGF 96

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            H  QS+ LML+ L   RN N ARNFL SI ++SNG V+L D++FN LIR++G AGLF+E
Sbjct: 97  SHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQE 156

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S+K+FQTMK +G+SPS +TFNSL SIL +RGRTG+  +L+DE+ +TYGV PD YTFN LI
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLI 216

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
            GFC NSMVDE F+ FK+M+ + C PDV+TYNTI+DGLCRAGKVKIAHNV+ GM
Sbjct: 217 NGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +1

Query: 394 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY 573
           D   FN LI  F +  +  E+ ++F+ M+    +P  VT+N++   L R G+  I   + 
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267

Query: 574 DELLK-TYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
             +LK    V P++ ++  L+RG+CM   +DE    F +M S   +P+ +TYNT++ GL 
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327

Query: 751 RAGKVKIAHNVMKG 792
            A +     +++ G
Sbjct: 328 EAHRYDEIKDILIG 341



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N L  + KK+   V  +   +  L+R +       E++ VF
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATD-VHPNVVSYTTLVRGYCMKQEIDEAVLVF 304

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY---DELLKTYGVKPDLYTFNILIRG 639
             M S G+ P+AVT+N+L   L    R   + ++    ++   T+   PD  TFNILI+ 
Sbjct: 305 HDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA--PDACTFNILIKA 362

Query: 640 FCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
            C    +D   K F+EM + K  PD  +Y+ ++  LC
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 399



 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
 Frame = +1

Query: 181 ISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTARNFLLS 360
           +S TT++    + +   +A+  F+     G      +Y  +++ L     ++  ++ L+ 
Sbjct: 282 VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIG 341

Query: 361 IPKKSNGAVEL---DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSI 531
                N A      D   FN LI+A  +AG    ++KVFQ M ++ + P + +++ L   
Sbjct: 342 ----GNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 397

Query: 532 LFRRGRTGIVFELYDELLKTYGV------KPDLYTFNILIRGFCMNSMVDEGFKFFKEMD 693
           L  R        L++EL +   +      KP    +N +    C N    +  K F+++ 
Sbjct: 398 LCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457

Query: 694 SFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 786
             +   D  +Y T++ G CR GK K A+ ++
Sbjct: 458 K-RGVQDPPSYKTLITGHCREGKFKPAYELL 487


>gb|ESW10402.1| hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
          Length = 728

 Score =  299 bits (766), Expect = 7e-79
 Identities = 147/233 (63%), Positives = 180/233 (77%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+ MA LIN+  WS  L + +      P+S+TTVL TLRLIK PSKAL FF WA ++GF 
Sbjct: 51  AKNMADLINSKPWSNALVSPLPT----PLSKTTVLRTLRLIKDPSKALHFFKWAQQSGFP 106

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           HT QSY +MLQ+L   RN N ARN L SI KKSNG V+L D+ FN LIR++ EAGLFKES
Sbjct: 107 HTAQSYFIMLQILGRHRNLNVARNLLFSIEKKSNGTVKLGDRFFNTLIRSYAEAGLFKES 166

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           LK+FQTMKS+ VSPS VTFNS+ SIL +RGRT +  E+YDE+L TYGV PD+ T+N+LIR
Sbjct: 167 LKLFQTMKSVAVSPSVVTFNSVLSILLKRGRTNMAKEVYDEMLHTYGVTPDICTYNVLIR 226

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFC NSMVDEGF+FF EM +  C+PD++TYNT+VDGLCRAGKV+IA N++  M
Sbjct: 227 GFCKNSMVDEGFRFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAM 279



 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
 Frame = +1

Query: 406 FNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELL 585
           +N LIR F +  +  E  + F  M ++   P  VT+N+L   L R G+  I   L + + 
Sbjct: 221 YNVLIRGFCKNSMVDEGFRFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAMT 280

Query: 586 KTY-GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGK 762
           K   G+ P++ T+  LIRG+CM   VDE     +EM     EP++ITYNT++ GLC A K
Sbjct: 281 KKCEGLNPNVVTYTTLIRGYCMKQEVDEALVVLEEMSGRGIEPNMITYNTLIKGLCEAHK 340

Query: 763 VKIAHNVMKGM 795
           +    +V+K M
Sbjct: 341 LDKMKDVLKWM 351



 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 43/162 (26%), Positives = 76/162 (46%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       ARN + ++ KK  G +  +   +  LIR +       E+L V 
Sbjct: 255 TYNTLVDGLCRAGKVRIARNLVNAMTKKCEG-LNPNVVTYTTLIRGYCMKQEVDEALVVL 313

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M   G+ P+ +T+N+L   L    +   + ++   +    G  PD +TFN +I   C 
Sbjct: 314 EEMSGRGIEPNMITYNTLIKGLCEAHKLDKMKDVLKWMKDNGGFSPDTFTFNTIIHSHCC 373

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIA 774
              +DE  K F+ M  F+   D  +Y+T++  LC+ G   +A
Sbjct: 374 AGNLDEALKVFESMKKFQVRMDSASYSTLIRSLCQKGDYDMA 415


>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X3 [Glycine max]
          Length = 734

 Score =  298 bits (762), Expect = 2e-78
 Identities = 148/233 (63%), Positives = 183/233 (78%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+T+A LIN+  +S  L +S+       IS+TTVL TLRLIK PSKAL+FF W  + GF 
Sbjct: 54  AKTIANLINSKPFSNGLLSSLLIT----ISKTTVLRTLRLIKDPSKALRFFKWTQQKGFS 109

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           HTP+SY +ML++L   RN N ARNFL SI K S G V+L+D+ FN LIR++ EAGLFKES
Sbjct: 110 HTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKES 169

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           +K+FQTMKSI VSPS VTFNSL SIL +RGRT +  E+YDE+L TYGV PD  T+N+LIR
Sbjct: 170 MKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIR 229

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFC NSMVDEGF+FF+EM+SF C+ DV+TYNT+VDGLCRAGKV+IA N++ GM
Sbjct: 230 GFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGM 282



 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = +1

Query: 385 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVF 564
           V  D   +N LIR F +  +  E  + F+ M+S       VT+N+L   L R G+  I  
Sbjct: 217 VSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIAR 276

Query: 565 ELYDEL-LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVD 741
            L + +  K  G+ P++ T+  LIRG+CM   V+E     +EM S   +P++ITYNT+V 
Sbjct: 277 NLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 336

Query: 742 GLCRAGKVKIAHNVMKGM 795
           GLC A K+    +V++ M
Sbjct: 337 GLCEAHKLDKMKDVLERM 354



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 44/165 (26%), Positives = 79/165 (47%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       ARN +  + KK  G +  +   +  LIR +      +E+L V 
Sbjct: 258 TYNTLVDGLCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVL 316

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M S G+ P+ +T+N+L   L    +   + ++ + +    G  PD +TFN +I   C 
Sbjct: 317 EEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCC 376

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNV 783
              +DE  K F+ M  F+   D  +Y+T++  LC+ G   +A  +
Sbjct: 377 AGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQL 421



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  +++ LC     +  ++ L  +  KS+G    D   FN +I     AG   E+LKVF
Sbjct: 330 TYNTLVKGLCEAHKLDKMKDVLERM--KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVF 387

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNIL 630
           ++MK   +   + ++++L   L ++G   +  +L+DE      LL  +G KP   ++N +
Sbjct: 388 ESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPI 447

Query: 631 IRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
               C +    +  +  +++   +   D  +Y T++ G C+ G  +  + ++  M
Sbjct: 448 FESLCEHGKTKKAERVIRQLMK-RGTQDPQSYTTVIMGHCKEGAYESGYELLMWM 501


>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 741

 Score =  298 bits (762), Expect = 2e-78
 Identities = 148/233 (63%), Positives = 183/233 (78%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+T+A LIN+  +S  L +S+       IS+TTVL TLRLIK PSKAL+FF W  + GF 
Sbjct: 52  AKTIANLINSKPFSNGLLSSLLIT----ISKTTVLRTLRLIKDPSKALRFFKWTQQKGFS 107

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           HTP+SY +ML++L   RN N ARNFL SI K S G V+L+D+ FN LIR++ EAGLFKES
Sbjct: 108 HTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKES 167

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           +K+FQTMKSI VSPS VTFNSL SIL +RGRT +  E+YDE+L TYGV PD  T+N+LIR
Sbjct: 168 MKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIR 227

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFC NSMVDEGF+FF+EM+SF C+ DV+TYNT+VDGLCRAGKV+IA N++ GM
Sbjct: 228 GFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGM 280



 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = +1

Query: 385 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVF 564
           V  D   +N LIR F +  +  E  + F+ M+S       VT+N+L   L R G+  I  
Sbjct: 215 VSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIAR 274

Query: 565 ELYDEL-LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVD 741
            L + +  K  G+ P++ T+  LIRG+CM   V+E     +EM S   +P++ITYNT+V 
Sbjct: 275 NLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 334

Query: 742 GLCRAGKVKIAHNVMKGM 795
           GLC A K+    +V++ M
Sbjct: 335 GLCEAHKLDKMKDVLERM 352



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 44/165 (26%), Positives = 79/165 (47%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       ARN +  + KK  G +  +   +  LIR +      +E+L V 
Sbjct: 256 TYNTLVDGLCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVL 314

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M S G+ P+ +T+N+L   L    +   + ++ + +    G  PD +TFN +I   C 
Sbjct: 315 EEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCC 374

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNV 783
              +DE  K F+ M  F+   D  +Y+T++  LC+ G   +A  +
Sbjct: 375 AGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQL 419



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  +++ LC     +  ++ L  +  KS+G    D   FN +I     AG   E+LKVF
Sbjct: 328 TYNTLVKGLCEAHKLDKMKDVLERM--KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVF 385

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNIL 630
           ++MK   +   + ++++L   L ++G   +  +L+DE      LL  +G KP   ++N +
Sbjct: 386 ESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPI 445

Query: 631 IRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
               C +    +  +  +++   +   D  +Y T++ G C+ G  +  + ++  M
Sbjct: 446 FESLCEHGKTKKAERVIRQLMK-RGTQDPQSYTTVIMGHCKEGAYESGYELLMWM 499


>ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 743

 Score =  298 bits (762), Expect = 2e-78
 Identities = 148/233 (63%), Positives = 183/233 (78%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A+T+A LIN+  +S  L +S+       IS+TTVL TLRLIK PSKAL+FF W  + GF 
Sbjct: 54  AKTIANLINSKPFSNGLLSSLLIT----ISKTTVLRTLRLIKDPSKALRFFKWTQQKGFS 109

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           HTP+SY +ML++L   RN N ARNFL SI K S G V+L+D+ FN LIR++ EAGLFKES
Sbjct: 110 HTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKES 169

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           +K+FQTMKSI VSPS VTFNSL SIL +RGRT +  E+YDE+L TYGV PD  T+N+LIR
Sbjct: 170 MKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIR 229

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFC NSMVDEGF+FF+EM+SF C+ DV+TYNT+VDGLCRAGKV+IA N++ GM
Sbjct: 230 GFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGM 282



 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = +1

Query: 385 VELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVF 564
           V  D   +N LIR F +  +  E  + F+ M+S       VT+N+L   L R G+  I  
Sbjct: 217 VSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIAR 276

Query: 565 ELYDEL-LKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVD 741
            L + +  K  G+ P++ T+  LIRG+CM   V+E     +EM S   +P++ITYNT+V 
Sbjct: 277 NLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 336

Query: 742 GLCRAGKVKIAHNVMKGM 795
           GLC A K+    +V++ M
Sbjct: 337 GLCEAHKLDKMKDVLERM 354



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 44/165 (26%), Positives = 79/165 (47%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       ARN +  + KK  G +  +   +  LIR +      +E+L V 
Sbjct: 258 TYNTLVDGLCRAGKVRIARNLVNGMGKKCEG-LNPNVVTYTTLIRGYCMKQEVEEALVVL 316

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M S G+ P+ +T+N+L   L    +   + ++ + +    G  PD +TFN +I   C 
Sbjct: 317 EEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCC 376

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNV 783
              +DE  K F+ M  F+   D  +Y+T++  LC+ G   +A  +
Sbjct: 377 AGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQL 421



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  +++ LC     +  ++ L  +  KS+G    D   FN +I     AG   E+LKVF
Sbjct: 330 TYNTLVKGLCEAHKLDKMKDVLERM--KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVF 387

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNIL 630
           ++MK   +   + ++++L   L ++G   +  +L+DE      LL  +G KP   ++N +
Sbjct: 388 ESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPI 447

Query: 631 IRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
               C +    +  +  +++   +   D  +Y T++ G C+ G  +  + ++  M
Sbjct: 448 FESLCEHGKTKKAERVIRQLMK-RGTQDPQSYTTVIMGHCKEGAYESGYELLMWM 501


>ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutrema salsugineum]
           gi|557096254|gb|ESQ36836.1| hypothetical protein
           EUTSA_v10006939mg [Eutrema salsugineum]
          Length = 720

 Score =  296 bits (757), Expect = 7e-78
 Identities = 139/235 (59%), Positives = 182/235 (77%), Gaps = 2/235 (0%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPP--ISQTTVLHTLRLIKTPSKALQFFYWAYRAG 270
           AR+MAR +N+  WS ++E+S++ L  P   IS+TTVL TLRLIK P+  L+FF W    G
Sbjct: 41  ARSMARAVNSKPWSDEVESSLSSLLHPSESISRTTVLQTLRLIKIPADGLRFFDWVSNKG 100

Query: 271 FVHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFK 450
           F H   S+ LML+LL   RN N ARNFL SI K+SNG V+L+D++FN LIR++G AGLF+
Sbjct: 101 FSHKEHSFFLMLELLGRARNLNVARNFLFSIEKRSNGCVQLEDRYFNSLIRSYGNAGLFQ 160

Query: 451 ESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNIL 630
           ES+K+F+ MK + +SPS +TFNSL SIL +RG+TG+  +++DE+ +TYG+ PD YTFNIL
Sbjct: 161 ESVKLFEAMKKMCISPSVLTFNSLLSILLKRGKTGMALDVFDEMRRTYGLTPDSYTFNIL 220

Query: 631 IRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           I G C NSMVDE F+ FK+M+ +KC PDV+TYNTI+DGLCRAGKVKIAHNV+ GM
Sbjct: 221 ISGLCKNSMVDEAFRIFKDMEPYKCSPDVVTYNTIIDGLCRAGKVKIAHNVLNGM 275



 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +1

Query: 394 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY 573
           D   FN LI    +  +  E+ ++F+ M+    SP  VT+N++   L R G+  I   + 
Sbjct: 213 DSYTFNILISGLCKNSMVDEAFRIFKDMEPYKCSPDVVTYNTIIDGLCRAGKVKIAHNVL 272

Query: 574 DELLKTYG-VKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
           + +LK    V P+  ++  L+RG+CM   +DE    F +M +   +P+V+T+NT++ GL 
Sbjct: 273 NGMLKKAADVHPNTVSYTTLVRGYCMKQEIDEALVVFHDMLTRGLKPNVVTFNTLIKGLS 332

Query: 751 RAGKVKIAHNVMKG 792
            A +      ++ G
Sbjct: 333 EAQRYDEIKEILNG 346



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N L  + KK+   V  +   +  L+R +       E+L VF
Sbjct: 251 TYNTIIDGLCRAGKVKIAHNVLNGMLKKA-ADVHPNTVSYTTLVRGYCMKQEIDEALVVF 309

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY---DELLKTYGVKPDLYTFNILIRG 639
             M + G+ P+ VTFN+L   L    R   + E+    D    T+   PD  TFNILI+ 
Sbjct: 310 HDMLTRGLKPNVVTFNTLIKGLSEAQRYDEIKEILNGRDYTSTTFA--PDACTFNILIKA 367

Query: 640 FCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
            C    +D   K F +M + K  PD  +Y+ ++  LC
Sbjct: 368 HCDAGHLDAAMKVFHQMVNMKLHPDSASYSVLIRTLC 404



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 6/215 (2%)
 Frame = +1

Query: 160 ADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNT 339
           AD+    +S TT++    + +   +AL  F+     G      ++  +++ L   + ++ 
Sbjct: 280 ADVHPNTVSYTTLVRGYCMKQEIDEALVVFHDMLTRGLKPNVVTFNTLIKGLSEAQRYDE 339

Query: 340 ARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNS 519
            +  L      S      D   FN LI+A  +AG    ++KVF  M ++ + P + +++ 
Sbjct: 340 IKEILNGRDYTSTTFAP-DACTFNILIKAHCDAGHLDAAMKVFHQMVNMKLHPDSASYSV 398

Query: 520 LFSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFF 681
           L   L  R        L++E      LL   G KP    +N + +  C N    +  K F
Sbjct: 399 LIRTLCLRNEFDRAATLFNELFEKEVLLGKDGCKPLAAAYNPMFQYLCANGKTKQAEKVF 458

Query: 682 KEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 786
           +++   +   D  +Y T++ G CR GK K A+ ++
Sbjct: 459 RQLMK-RGAQDPPSYRTLIAGHCREGKFKAAYELL 492


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
           gi|550323558|gb|ERP53036.1| hypothetical protein
           POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  295 bits (756), Expect = 1e-77
 Identities = 141/233 (60%), Positives = 178/233 (76%)
 Frame = +1

Query: 97  ARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFV 276
           A++MARLIN+  WS +LE+S+  L+ P IS+TT    LR I +P KA +FF WA R GF 
Sbjct: 62  AKSMARLINSKPWSTELESSLFSLS-PSISKTTFFQVLRFIASPPKAFEFFNWASRNGFA 120

Query: 277 HTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKES 456
           H  +SY +ML +L    N N ARNFL SI ++SNG+V+++D+  N L+R++G AGLF E+
Sbjct: 121 HDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEA 180

Query: 457 LKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIR 636
           +K+F  MKS GVSPS +TFNSL  IL +RGRT +   ++DE+  TYGV PD YTFNILIR
Sbjct: 181 IKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIR 240

Query: 637 GFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           GFC NSMVDEGF+FFKEM  F CEPDV+TYNT+VDGLCRAGKV+IAHNV+KGM
Sbjct: 241 GFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGM 293



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +1

Query: 394 DDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELY 573
           D   FN LIR F +  +  E  + F+ M      P  VT+N+L   L R G+  I   + 
Sbjct: 231 DTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVV 290

Query: 574 DELLKTY-GVKPDLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLC 750
             ++K    + PD+ T+  L+RG+CM   +DE    F+EM S   +P+ ITYNT++ GLC
Sbjct: 291 KGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLC 350

Query: 751 RAGKVKIAHNVMKG 792
              K      ++ G
Sbjct: 351 EVQKFDKIKEILGG 364



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 45/165 (27%), Positives = 75/165 (45%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVF 468
           +Y  ++  LC       A N +  + KK    +  D   +  L+R +       E+L VF
Sbjct: 269 TYNTLVDGLCRAGKVRIAHNVVKGMVKKMKD-LSPDVVTYTTLVRGYCMKQEIDEALVVF 327

Query: 469 QTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGFCM 648
           + M S G+ P+ +T+N+L   L    +   + E+    +   G  PD  T+N L+   C 
Sbjct: 328 EEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCD 387

Query: 649 NSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNV 783
               DE  K FK+M   K +PD  TY+ ++  LC+ G  + A  +
Sbjct: 388 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQL 432



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
 Frame = +1

Query: 163 DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 342
           DL+   ++ TT++    + +   +AL  F      G      +Y  +++ LC  + F+  
Sbjct: 299 DLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKI 358

Query: 343 RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 522
           +  +L       G V  D   +N L+ A  +AG F E+LK+F+ MK + V P + T++ L
Sbjct: 359 KE-ILGGAVGGRGFVP-DTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVL 416

Query: 523 FSILFRRGRTGIVFELYDE------LLKTYGVKPDLYTFNILIRGFCMNSMVDEGFKFFK 684
              L +RG      +L+D+      LL+  G  P +  +N +    C N    +  + F+
Sbjct: 417 IRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFR 476

Query: 685 EMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 786
           ++   K   D  +Y T++ G C+ G  +  + ++
Sbjct: 477 QLMK-KGTQDPPSYKTLIIGHCKEGTFEAGYKLL 509



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 7/183 (3%)
 Frame = +1

Query: 268 GFVHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLF 447
           GFV    +Y  ++   C   NF+ A   L    K     V+ D   ++ LIR   + G F
Sbjct: 370 GFVPDTCTYNTLMNAQCDAGNFDEA---LKMFKKMKELKVQPDSATYSVLIRNLCQRGDF 426

Query: 448 KESLKVFQTM-------KSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKP 606
           + + ++F  +       +  G +P    +N +F  L + G+T     ++ +L+K     P
Sbjct: 427 ERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDP 486

Query: 607 DLYTFNILIRGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 786
             Y    LI G C     + G+K    M      PD  TY  +++G  + G+  +A+  +
Sbjct: 487 PSY--KTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTL 544

Query: 787 KGM 795
           + M
Sbjct: 545 ERM 547


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  293 bits (749), Expect = 6e-77
 Identities = 142/234 (60%), Positives = 179/234 (76%)
 Frame = +1

Query: 94  RARTMARLINTSLWSAQLEASIADLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGF 273
           +A  MA +IN+  WS+ LE+S+A L+ P +SQTTVL TL  ++  SKALQFF WA   G+
Sbjct: 49  KATVMAEMINSKPWSSDLESSLASLS-PSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGY 107

Query: 274 VHTPQSYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKE 453
            HT QSY  ML++L   R+ NTARNFL SI K+S G V+L+ + FN L+R F  AGLF+E
Sbjct: 108 THTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQE 167

Query: 454 SLKVFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILI 633
           S+KVF  MKS GVSPS VTFNSL +IL +RGRT +  ++YDE+L TYGV PD +TFNILI
Sbjct: 168 SIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILI 227

Query: 634 RGFCMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVMKGM 795
           RGFCMN MVD+GF+ F ++  F CEPDV+TYNT+VDGLCRAGKV +A+NV+KGM
Sbjct: 228 RGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGM 281



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
 Frame = +1

Query: 289 SYLLMLQLLCAGRNFNTARNFLLSIPKKSNGAVELDDK--HFNCLIRAFGEAGLFKESLK 462
           +Y  ++  LC       A N +  + KKS   V+L+     +  LIR +      +++L 
Sbjct: 257 TYNTLVDGLCRAGKVTVAYNVVKGMGKKS---VDLNPNVVTYTTLIRGYCAKREIEKALA 313

Query: 463 VFQTMKSIGVSPSAVTFNSLFSILFRRGRTGIVFELYDELLKTYGVKPDLYTFNILIRGF 642
           VF+ M + G+  + +T+N+L   L    +   + ++ +         PD  TFN L+   
Sbjct: 314 VFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCH 373

Query: 643 CMNSMVDEGFKFFKEMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 786
           C    +D+  K F+ M   K +PD  TY+ +V  LC+ G  + A +++
Sbjct: 374 CHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLL 421



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 6/214 (2%)
 Frame = +1

Query: 163 DLAQPPISQTTVLHTLRLIKTPSKALQFFYWAYRAGFVHTPQSYLLMLQLLCAGRNFNTA 342
           DL    ++ TT++      +   KAL  F      G      +Y  +++ LC  R F   
Sbjct: 287 DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKI 346

Query: 343 RNFLLSIPKKSNGAVELDDKHFNCLIRAFGEAGLFKESLKVFQTMKSIGVSPSAVTFNSL 522
           ++ L       +G    D   FN L+     AG   ++LKVF+ M  + + P + T+++L
Sbjct: 347 KDILEG--TAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSAL 404

Query: 523 FSILFRRGRTGIVFELYDELLKTY------GVKPDLYTFNILIRGFCMNSMVDEGFKFFK 684
              L + G      +L D+LL+        G KP +  +N + +  C      +  K F+
Sbjct: 405 VRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFR 464

Query: 685 EMDSFKCEPDVITYNTIVDGLCRAGKVKIAHNVM 786
           ++   +   D  +Y T++ G C+ G  +  + ++
Sbjct: 465 QL-MRRGTQDPPSYKTLIMGHCKEGTFESGYELL 497