BLASTX nr result
ID: Catharanthus23_contig00028769
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028769
(221 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366429.1| PREDICTED: probable rhamnogalacturonate lyas... 82 7e-14
ref|XP_006366428.1| PREDICTED: probable rhamnogalacturonate lyas... 82 7e-14
ref|XP_006366427.1| PREDICTED: probable rhamnogalacturonate lyas... 82 7e-14
ref|XP_004252722.1| PREDICTED: probable rhamnogalacturonate lyas... 82 7e-14
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas... 82 7e-14
gb|AAB60742.1| F21M12.28 gene product [Arabidopsis thaliana] 82 9e-14
ref|NP_172460.6| rhamnogalacturonate lyase-like protein [Arabido... 82 9e-14
ref|XP_006417521.1| hypothetical protein EUTSA_v10007093mg [Eutr... 81 1e-13
ref|XP_006304407.1| hypothetical protein CARUB_v10010965mg [Caps... 81 1e-13
ref|XP_002892533.1| hypothetical protein ARALYDRAFT_334271 [Arab... 81 1e-13
emb|CBI19298.3| unnamed protein product [Vitis vinifera] 81 1e-13
ref|XP_006338026.1| PREDICTED: probable rhamnogalacturonate lyas... 79 8e-13
ref|XP_004238544.1| PREDICTED: probable rhamnogalacturonate lyas... 79 8e-13
ref|XP_002527358.1| lyase, putative [Ricinus communis] gi|223533... 79 8e-13
ref|XP_006433777.1| hypothetical protein CICLE_v10003131mg [Citr... 77 2e-12
ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like ... 77 2e-12
ref|XP_002301115.1| hypothetical protein POPTR_0002s11100g [Popu... 77 2e-12
ref|XP_006472416.1| PREDICTED: rhamnogalacturonate lyase B-like ... 77 3e-12
ref|XP_006472413.1| PREDICTED: rhamnogalacturonate lyase B-like ... 77 3e-12
ref|XP_006472412.1| PREDICTED: rhamnogalacturonate lyase B-like ... 77 3e-12
>ref|XP_006366429.1| PREDICTED: probable rhamnogalacturonate lyase B-like isoform X3
[Solanum tuberosum]
Length = 416
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYM ++D RQRFMP AEDRLPGR + LAYPEAVLLV+PIE +FKGEV
Sbjct: 155 KFHYMVITDDRQRFMPSAEDRLPGRGEPLAYPEAVLLVDPIEPEFKGEV 203
>ref|XP_006366428.1| PREDICTED: probable rhamnogalacturonate lyase B-like isoform X2
[Solanum tuberosum]
Length = 465
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYM ++D RQRFMP AEDRLPGR + LAYPEAVLLV+PIE +FKGEV
Sbjct: 155 KFHYMVITDDRQRFMPSAEDRLPGRGEPLAYPEAVLLVDPIEPEFKGEV 203
>ref|XP_006366427.1| PREDICTED: probable rhamnogalacturonate lyase B-like isoform X1
[Solanum tuberosum]
Length = 640
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYM ++D RQRFMP AEDRLPGR + LAYPEAVLLV+PIE +FKGEV
Sbjct: 155 KFHYMVITDDRQRFMPSAEDRLPGRGEPLAYPEAVLLVDPIEPEFKGEV 203
>ref|XP_004252722.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Solanum
lycopersicum]
Length = 640
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYM ++D RQRFMP AEDRLPGR + LAYPEAVLLV+PIE +FKGEV
Sbjct: 155 KFHYMVITDDRQRFMPSAEDRLPGRGEPLAYPEAVLLVDPIEPEFKGEV 203
>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
[Vitis vinifera]
Length = 643
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMA++D RQRFMP +DRLPGR Q LAYPEAVLLVNP+E +FKGEV
Sbjct: 152 KFHYMAMADNRQRFMPLPDDRLPGRGQPLAYPEAVLLVNPVEPEFKGEV 200
>gb|AAB60742.1| F21M12.28 gene product [Arabidopsis thaliana]
Length = 447
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAV+D RQRFMP +DRLP R Q LAYPEAVLLVNP+E+QFKGEV
Sbjct: 165 KFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQFKGEV 213
>ref|NP_172460.6| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]
gi|332190390|gb|AEE28511.1| rhamnogalacturonate
lyase-like protein [Arabidopsis thaliana]
Length = 617
Score = 81.6 bits (200), Expect = 9e-14
Identities = 38/49 (77%), Positives = 43/49 (87%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAV+D RQRFMP +DRLP R Q LAYPEAVLLVNP+E+QFKGEV
Sbjct: 136 KFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQFKGEV 184
>ref|XP_006417521.1| hypothetical protein EUTSA_v10007093mg [Eutrema salsugineum]
gi|557095292|gb|ESQ35874.1| hypothetical protein
EUTSA_v10007093mg [Eutrema salsugineum]
Length = 617
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAV+D RQRFMP +DRLP R Q LAYPEAVLLVNP+E QFKGEV
Sbjct: 136 KFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPVEPQFKGEV 184
>ref|XP_006304407.1| hypothetical protein CARUB_v10010965mg [Capsella rubella]
gi|482573118|gb|EOA37305.1| hypothetical protein
CARUB_v10010965mg [Capsella rubella]
Length = 617
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAV+D RQRFMP +DRLP R Q LAYPEAVLLVNP+E QFKGEV
Sbjct: 136 KFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPVEPQFKGEV 184
>ref|XP_002892533.1| hypothetical protein ARALYDRAFT_334271 [Arabidopsis lyrata subsp.
lyrata] gi|297338375|gb|EFH68792.1| hypothetical protein
ARALYDRAFT_334271 [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAV+D RQRFMP +DRLP R Q LAYPEAVLLVNP+E QFKGEV
Sbjct: 152 KFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPVEPQFKGEV 200
>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -1
Query: 203 FHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
FHYMA++D RQRFMP +DRLPGR Q LAYPEAVLLVNP+E +FKGEV
Sbjct: 165 FHYMAMADNRQRFMPLPDDRLPGRGQPLAYPEAVLLVNPVEPEFKGEV 212
>ref|XP_006338026.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Solanum
tuberosum]
Length = 623
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMA++D RQR+MP +DRLP R Q LAYPEAVLLVNPIE +FKGEV
Sbjct: 139 KFHYMAMADNRQRYMPLPDDRLPDRGQPLAYPEAVLLVNPIEPEFKGEV 187
>ref|XP_004238544.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Solanum
lycopersicum]
Length = 640
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMA++D RQR+MP +DRLP R Q LAYPEAVLLVNPIE +FKGEV
Sbjct: 156 KFHYMAMADNRQRYMPLPDDRLPDRGQPLAYPEAVLLVNPIEPEFKGEV 204
>ref|XP_002527358.1| lyase, putative [Ricinus communis] gi|223533277|gb|EEF35030.1|
lyase, putative [Ricinus communis]
Length = 646
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAV+D RQR+MP EDRLP R + LAYPEAVLLVNP+E +FKGEV
Sbjct: 168 KFHYMAVADNRQRYMPLPEDRLPPRGKPLAYPEAVLLVNPVEPEFKGEV 216
>ref|XP_006433777.1| hypothetical protein CICLE_v10003131mg [Citrus clementina]
gi|557535899|gb|ESR47017.1| hypothetical protein
CICLE_v10003131mg [Citrus clementina]
Length = 635
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FH+M+++D RQR MP +DRLPGR Q LAYPEAVLLVNP+E +FKGEV
Sbjct: 144 KFHFMSIADNRQRLMPLPDDRLPGRGQVLAYPEAVLLVNPVEPEFKGEV 192
>ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
Length = 651
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAVSD RQRFMP +DRLPGR ++L PEAVLLVNP+E FKGEV
Sbjct: 155 KFHYMAVSDDRQRFMPLPDDRLPGRGKELVPPEAVLLVNPVEPDFKGEV 203
>ref|XP_002301115.1| hypothetical protein POPTR_0002s11100g [Populus trichocarpa]
gi|222842841|gb|EEE80388.1| hypothetical protein
POPTR_0002s11100g [Populus trichocarpa]
Length = 731
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMAV+D RQR MP EDRLP R + LAYPEAVLLVNP+E +FKGEV
Sbjct: 246 KFHYMAVADNRQRCMPLPEDRLPKRGEPLAYPEAVLLVNPVEAEFKGEV 294
>ref|XP_006472416.1| PREDICTED: rhamnogalacturonate lyase B-like [Citrus sinensis]
Length = 649
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+F YMAVSD RQR MP +DRLP RC++LA+PEAVLLVNPIE +F GEV
Sbjct: 155 KFQYMAVSDNRQRHMPLPDDRLPKRCKELAFPEAVLLVNPIEPEFNGEV 203
>ref|XP_006472413.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X3 [Citrus
sinensis]
Length = 638
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMA++D RQR+MP +DR+P R Q LAYPEAVLLVNP+E FKGEV
Sbjct: 155 KFHYMAIADNRQRYMPLPDDRVPPRGQPLAYPEAVLLVNPVEPDFKGEV 203
>ref|XP_006472412.1| PREDICTED: rhamnogalacturonate lyase B-like isoform X2 [Citrus
sinensis]
Length = 647
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = -1
Query: 206 RFHYMAVSDTRQRFMPQAEDRLPGRCQQLAYPEAVLLVNPIETQFKGEV 60
+FHYMA++D RQR+MP +DR+P R Q LAYPEAVLLVNP+E FKGEV
Sbjct: 155 KFHYMAIADNRQRYMPLPDDRVPPRGQPLAYPEAVLLVNPVEPDFKGEV 203