BLASTX nr result
ID: Catharanthus23_contig00028068
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00028068 (458 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera] 48 9e-07 ref|XP_002272856.2| PREDICTED: uncharacterized protein LOC100249... 49 3e-06 >emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera] Length = 1349 Score = 48.1 bits (113), Expect(2) = 9e-07 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 3/103 (2%) Frame = -3 Query: 339 VDHHYSREQLIVVIQSDMHITDSSVGIN--G*DLAQVAESPSSRLSTELRATCYVQYLLS 166 +D H E+L+ V ++ I +S+ + +++ ++ + A Y+ L+S Sbjct: 872 IDWHALCEELLGVRPAETDIRGASLTVRFITTHFSRLPPGVVDEVTLQRHARAYLLLLVS 931 Query: 165 SSLFTDKSGNNVLGKMWPLVKDVGSFGGFAWGT-TLAYLYRNL 40 SLFTDK G + + P+++D G ++WG+ TLA+LYR L Sbjct: 932 GSLFTDKKGVYIQLAILPMLRDFGETAQYSWGSATLAHLYREL 974 Score = 30.0 bits (66), Expect(2) = 9e-07 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -2 Query: 457 SAFVERW*PDTNSFHIP*G 401 +A VERW P+T++FH+P G Sbjct: 826 TALVERWRPETHTFHMPVG 844 >ref|XP_002272856.2| PREDICTED: uncharacterized protein LOC100249550 [Vitis vinifera] Length = 1369 Score = 48.9 bits (115), Expect(2) = 3e-06 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 3/103 (2%) Frame = -3 Query: 339 VDHHYSREQLIVVIQSDMHITDSSVGIN--G*DLAQVAESPSSRLSTELRATCYVQYLLS 166 +D H E+L+ V ++ I +S+ + +++ ++ + A Y+ L+S Sbjct: 584 IDWHALCEELLGVRPAETDIRGASLTVRFITTHFSRLPPGVVDEVTLQRHARAYLLLLVS 643 Query: 165 SSLFTDKSGNNVLGKMWPLVKDVGSFGGFAWGT-TLAYLYRNL 40 SLFTDK G + + P+++D G ++WG+ TLA+LYR L Sbjct: 644 GSLFTDKKGVYIQLAILPMLRDFGEIAQYSWGSATLAHLYREL 686 Score = 27.3 bits (59), Expect(2) = 3e-06 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -1 Query: 443 EVVARHQQFPHTLREMTVTLHDVKLI 366 E+ R PH EMT+TL DV ++ Sbjct: 543 EMAPRDAHIPHASGEMTITLQDVAIL 568