BLASTX nr result

ID: Catharanthus23_contig00028068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028068
         (458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera]    48   9e-07
ref|XP_002272856.2| PREDICTED: uncharacterized protein LOC100249...    49   3e-06

>emb|CAN83825.1| hypothetical protein VITISV_043699 [Vitis vinifera]
          Length = 1349

 Score = 48.1 bits (113), Expect(2) = 9e-07
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -3

Query: 339  VDHHYSREQLIVVIQSDMHITDSSVGIN--G*DLAQVAESPSSRLSTELRATCYVQYLLS 166
            +D H   E+L+ V  ++  I  +S+ +       +++       ++ +  A  Y+  L+S
Sbjct: 872  IDWHALCEELLGVRPAETDIRGASLTVRFITTHFSRLPPGVVDEVTLQRHARAYLLLLVS 931

Query: 165  SSLFTDKSGNNVLGKMWPLVKDVGSFGGFAWGT-TLAYLYRNL 40
             SLFTDK G  +   + P+++D G    ++WG+ TLA+LYR L
Sbjct: 932  GSLFTDKKGVYIQLAILPMLRDFGETAQYSWGSATLAHLYREL 974



 Score = 30.0 bits (66), Expect(2) = 9e-07
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 457 SAFVERW*PDTNSFHIP*G 401
           +A VERW P+T++FH+P G
Sbjct: 826 TALVERWRPETHTFHMPVG 844


>ref|XP_002272856.2| PREDICTED: uncharacterized protein LOC100249550 [Vitis vinifera]
          Length = 1369

 Score = 48.9 bits (115), Expect(2) = 3e-06
 Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -3

Query: 339 VDHHYSREQLIVVIQSDMHITDSSVGIN--G*DLAQVAESPSSRLSTELRATCYVQYLLS 166
           +D H   E+L+ V  ++  I  +S+ +       +++       ++ +  A  Y+  L+S
Sbjct: 584 IDWHALCEELLGVRPAETDIRGASLTVRFITTHFSRLPPGVVDEVTLQRHARAYLLLLVS 643

Query: 165 SSLFTDKSGNNVLGKMWPLVKDVGSFGGFAWGT-TLAYLYRNL 40
            SLFTDK G  +   + P+++D G    ++WG+ TLA+LYR L
Sbjct: 644 GSLFTDKKGVYIQLAILPMLRDFGEIAQYSWGSATLAHLYREL 686



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 443 EVVARHQQFPHTLREMTVTLHDVKLI 366
           E+  R    PH   EMT+TL DV ++
Sbjct: 543 EMAPRDAHIPHASGEMTITLQDVAIL 568


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