BLASTX nr result

ID: Catharanthus23_contig00027059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00027059
         (351 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY28473.1| D6-type cyclin isoform 8 [Theobroma cacao]              60   3e-07
gb|EOY28470.1| D6-type cyclin isoform 5 [Theobroma cacao]              60   3e-07
gb|EOY28468.1| D6-type cyclin isoform 3 [Theobroma cacao]              60   3e-07
gb|EOY28467.1| D6-type cyclin isoform 2 [Theobroma cacao]              60   3e-07
gb|EOY28466.1| D6-type cyclin isoform 1 [Theobroma cacao]              60   3e-07
ref|XP_006449188.1| hypothetical protein CICLE_v10015968mg [Citr...    58   2e-06
ref|XP_006467923.1| PREDICTED: putative cyclin-D6-1-like [Citrus...    56   6e-06
gb|EMJ16911.1| hypothetical protein PRUPE_ppa008931mg [Prunus pe...    56   6e-06

>gb|EOY28473.1| D6-type cyclin isoform 8 [Theobroma cacao]
          Length = 292

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDM------EEGCGALLSSSTLTPWSVLDQHYEASE------- 141
           SC+YVN E LLKC +  +DM      E     + SSST TP SVLD H   +E       
Sbjct: 197 SCEYVNKESLLKCFNATQDMVVNQISESIVDTVSSSSTRTPLSVLDCHCTKAESESTTST 256

Query: 142 -------EGDSVKRRRLNDFCSDG-MYQFSQIQ 216
                  E   +KRR+LNDFCS+    Q SQIQ
Sbjct: 257 MGATAMAEKREIKRRKLNDFCSESTRVQISQIQ 289


>gb|EOY28470.1| D6-type cyclin isoform 5 [Theobroma cacao]
          Length = 320

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDM------EEGCGALLSSSTLTPWSVLDQHYEASE------- 141
           SC+YVN E LLKC +  +DM      E     + SSST TP SVLD H   +E       
Sbjct: 225 SCEYVNKESLLKCFNATQDMVVNQISESIVDTVSSSSTRTPLSVLDCHCTKAESESTTST 284

Query: 142 -------EGDSVKRRRLNDFCSDG-MYQFSQIQ 216
                  E   +KRR+LNDFCS+    Q SQIQ
Sbjct: 285 MGATAMAEKREIKRRKLNDFCSESTRVQISQIQ 317


>gb|EOY28468.1| D6-type cyclin isoform 3 [Theobroma cacao]
          Length = 326

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDM------EEGCGALLSSSTLTPWSVLDQHYEASE------- 141
           SC+YVN E LLKC +  +DM      E     + SSST TP SVLD H   +E       
Sbjct: 231 SCEYVNKESLLKCFNATQDMVVNQISESIVDTVSSSSTRTPLSVLDCHCTKAESESTTST 290

Query: 142 -------EGDSVKRRRLNDFCSDG-MYQFSQIQ 216
                  E   +KRR+LNDFCS+    Q SQIQ
Sbjct: 291 MGATAMAEKREIKRRKLNDFCSESTRVQISQIQ 323


>gb|EOY28467.1| D6-type cyclin isoform 2 [Theobroma cacao]
          Length = 327

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDM------EEGCGALLSSSTLTPWSVLDQHYEASE------- 141
           SC+YVN E LLKC +  +DM      E     + SSST TP SVLD H   +E       
Sbjct: 232 SCEYVNKESLLKCFNATQDMVVNQISESIVDTVSSSSTRTPLSVLDCHCTKAESESTTST 291

Query: 142 -------EGDSVKRRRLNDFCSDG-MYQFSQIQ 216
                  E   +KRR+LNDFCS+    Q SQIQ
Sbjct: 292 MGATAMAEKREIKRRKLNDFCSESTRVQISQIQ 324


>gb|EOY28466.1| D6-type cyclin isoform 1 [Theobroma cacao]
          Length = 321

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDM------EEGCGALLSSSTLTPWSVLDQHYEASE------- 141
           SC+YVN E LLKC +  +DM      E     + SSST TP SVLD H   +E       
Sbjct: 226 SCEYVNKESLLKCFNATQDMVVNQISESIVDTVSSSSTRTPLSVLDCHCTKAESESTTST 285

Query: 142 -------EGDSVKRRRLNDFCSDG-MYQFSQIQ 216
                  E   +KRR+LNDFCS+    Q SQIQ
Sbjct: 286 MGATAMAEKREIKRRKLNDFCSESTRVQISQIQ 318


>ref|XP_006449188.1| hypothetical protein CICLE_v10015968mg [Citrus clementina]
           gi|557551799|gb|ESR62428.1| hypothetical protein
           CICLE_v10015968mg [Citrus clementina]
          Length = 318

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 20/94 (21%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDMEE--GCGALLS--SSTLTPWSVLDQHYEASE--------- 141
           S  YVN E L KC   M++M E  GC ++L   SS+ T +SV+D     SE         
Sbjct: 225 SSDYVNKEDLSKCFDTMQEMVEMDGCESILDTLSSSRTQFSVVDYKCTKSESQQITNSGI 284

Query: 142 -------EGDSVKRRRLNDFCSDGMYQFSQIQHC 222
                  E   +KRR++N FCS+G +Q S+IQ+C
Sbjct: 285 TTTTMMPEKREIKRRKMNGFCSEGEFQLSRIQNC 318


>ref|XP_006467923.1| PREDICTED: putative cyclin-D6-1-like [Citrus sinensis]
          Length = 318

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 20/94 (21%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDMEE--GCGALLS--SSTLTPWSVLDQHYEASE--------- 141
           S  YVN E L KC   +++M E  GC ++L   SS+ T +SV+D     SE         
Sbjct: 225 SSDYVNKEDLSKCYDTVQEMVEMDGCESILDTLSSSRTQFSVVDYKCTKSESQQITNSSI 284

Query: 142 -------EGDSVKRRRLNDFCSDGMYQFSQIQHC 222
                  E   +KRR++N FCS+G +Q S+IQ+C
Sbjct: 285 TTTTMMPEKREIKRRKMNGFCSEGEFQLSRIQNC 318


>gb|EMJ16911.1| hypothetical protein PRUPE_ppa008931mg [Prunus persica]
          Length = 313

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 17/91 (18%)
 Frame = +1

Query: 1   SCQYVNNEGLLKCLSVMRDM-EEGCGALLS--SSTLTPWSVLDQHYEASEEGDS------ 153
           +C YVN E +L+C S M+D+  +G  ++L   SS++T  +VLD ++ +S E  +      
Sbjct: 223 NCSYVNKENMLQCYSAMQDIVADGFDSVLEMVSSSVTAANVLDHNFSSSAESGTTTVTGM 282

Query: 154 --------VKRRRLNDFCSDGMYQFSQIQHC 222
                   +KRR+++++C D   Q SQIQ+C
Sbjct: 283 TPLRLEKDMKRRKISEYCKDHRVQISQIQNC 313


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