BLASTX nr result
ID: Catharanthus23_contig00026963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00026963
(288 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
gb|EOY03567.1| Pentatricopeptide repeat-containing protein, puta... 111 1e-22
gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus pe... 110 1e-22
ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [A... 89 8e-16
ref|XP_004497993.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 89 8e-16
ref|XP_003593014.1| Pentatricopeptide repeat-containing protein ... 87 3e-15
gb|EMS47599.1| hypothetical protein TRIUR3_32599 [Triticum urartu] 80 4e-13
gb|EMT28278.1| Malate dehydrogenase, chloroplastic [Aegilops tau... 79 5e-13
tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea m... 74 3e-11
ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group] g... 72 8e-11
gb|EEC70623.1| hypothetical protein OsI_01881 [Oryza sativa Indi... 72 8e-11
gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japo... 72 8e-11
gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indi... 72 8e-11
gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis] 72 1e-10
ref|XP_006644161.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_004983975.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [S... 69 8e-10
ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [A... 68 1e-09
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,... 64 3e-08
gb|EEC73759.1| hypothetical protein OsI_08419 [Oryza sativa Indi... 63 3e-08
>ref|XP_004293160.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Fragaria vesca subsp. vesca]
Length = 819
Score = 114 bits (285), Expect = 1e-23
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EG+S+H YAIRR IG DEVFETSLMDM+ + G P A M +KTIG WN ++ GY
Sbjct: 227 EGRSVHGYAIRRGIGGFDEVFETSLMDMYNKCGAPKIAACIFGKMKKKTIGLWNVMIAGY 286
Query: 106 LKSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
L+S+ PL+A + F Q++QE VPDLIT +NG+LSC
Sbjct: 287 LRSELPLQAFRCFCQVMQEKYVPDLITFSNGILSC 321
>gb|EOY03567.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 790
Score = 111 bits (277), Expect = 1e-22
Identities = 54/95 (56%), Positives = 68/95 (71%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EG+SIH YAIRR IG DEVFETSL+DM+++ P A +M +TIGSWNA+++GY
Sbjct: 255 EGRSIHGYAIRRRIGCLDEVFETSLIDMYIKCRVPTMAACIFGSMKVRTIGSWNAMIIGY 314
Query: 106 LKSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
L+ P EAL FH MVQEN PDLI+ +NG+L C
Sbjct: 315 LQMGQPSEALGHFHTMVQENVFPDLISLSNGILCC 349
>gb|EMJ18360.1| hypothetical protein PRUPE_ppa001868mg [Prunus persica]
Length = 751
Score = 110 bits (276), Expect = 1e-22
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EG S+H YA+RR IG SDEVFETSL+DM+ + P A M +KTIGSWNA++VGY
Sbjct: 218 EGCSVHGYAVRRGIGSSDEVFETSLLDMYNKCKAPRMAACIFGKMDKKTIGSWNAMIVGY 277
Query: 106 LKSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
LK + P EA +F Q++Q+N V DLIT +NG+LSC
Sbjct: 278 LKMEEPSEAFHLFCQVMQDNFVLDLITLSNGILSC 312
>ref|XP_006848707.1| hypothetical protein AMTR_s00177p00030400 [Amborella trichopoda]
gi|548852118|gb|ERN10288.1| hypothetical protein
AMTR_s00177p00030400 [Amborella trichopoda]
Length = 600
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
E KSIH +A+RR +G DE+FETSL+D +++ G + S + ++ +GSWN ++ GY
Sbjct: 67 EVKSIHCFALRRGVGHGDEIFETSLIDGYVKCGALEITGAIFSGVGKRNVGSWNVIISGY 126
Query: 106 LKSQPPLEALKVFH-QMVQENRVPDLITSANGLLSC 2
++ PL AL FH M++ N PDLI+ AN LL C
Sbjct: 127 VQYGNPLRALNFFHFMMIERNLKPDLISLANALLGC 162
>ref|XP_004497993.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25060, mitochondrial-like
[Cicer arietinum]
Length = 528
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVAL---NLSTMSRKTIGSWNALV 116
EG+ IH YA+RR IG D+VFET+L+DM+ + G A + +S K +GSWN L+
Sbjct: 125 EGRGIHGYAVRRGIGLCDDVFETTLLDMYCKCGGIGIAASAFNKMDALSTKNVGSWNTLI 184
Query: 115 VGYLKSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
+L+S LEA ++F +M+ N +PDL+T AN +L C
Sbjct: 185 SAFLRSGKALEAFELFRRMMCRNILPDLLTLANAILCC 222
>ref|XP_003593014.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482062|gb|AES63265.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 628
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRS----GPPDKVALNLSTMSRKTIGSWNAL 119
EG+++H YA+RR IG D+VFET+L+DM+ + G V + R +GSWN L
Sbjct: 135 EGRAVHGYAVRRGIGLGDDVFETTLLDMYHKCAGCVGLAASVFAKMDARKRTKVGSWNTL 194
Query: 118 VVGYLKSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
+ GYL++ LEA ++F +M+ N +PDL+T AN + C
Sbjct: 195 IAGYLRNGQALEAFELFRRMMCRNILPDLLTLANVIFCC 233
>gb|EMS47599.1| hypothetical protein TRIUR3_32599 [Triticum urartu]
Length = 936
Score = 79.7 bits (195), Expect = 4e-13
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = -3
Query: 283 GKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGYL 104
GKS+H+YAIRR IG SDEV ETSL+DM+ R G ++A L S+ T+ SWNA++ G
Sbjct: 255 GKSMHSYAIRRGIGVSDEVLETSLVDMYARCG-AYQLAYALLNNSKGTVASWNAVLSGLT 313
Query: 103 KSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++Q +A++ F M+ ++V PD +T AN L +C
Sbjct: 314 RTQKSRDAIQYFSVMLHHHKVTPDSVTFANVLSAC 348
>gb|EMT28278.1| Malate dehydrogenase, chloroplastic [Aegilops tauschii]
Length = 1360
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = -3
Query: 283 GKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGYL 104
GKS+H YAIRR IG SDEV ETSL+DM+ R G ++A L S+ T+ SWNA++ G
Sbjct: 255 GKSMHCYAIRRGIGVSDEVLETSLVDMYARCG-AYQLAYALLNNSKGTVASWNAVLSGLT 313
Query: 103 KSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++Q +A++ F M+ ++V PD +T AN L +C
Sbjct: 314 RTQESRDAIQYFSVMLHHHKVTPDSVTFANVLSAC 348
>tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
Length = 805
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR+IG SDEV ETSL+ M+M+ G + L S +++ SWNA++ G
Sbjct: 265 EGKSVHCYSIRRDIGISDEVLETSLVHMYMQCGACQLASAVLKN-SAQSVASWNAMLAGL 323
Query: 106 LKSQPPLEALKVFHQMVQENR-VPDLITSANGLLSC 2
+++ A+ + M+ E++ VPD +T AN + +C
Sbjct: 324 VRTGQSGNAIHYLYIMLYEHKVVPDSVTYANVISAC 359
>ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|53792343|dbj|BAD53077.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113532542|dbj|BAF04925.1|
Os01g0357800 [Oryza sativa Japonica Group]
Length = 804
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR IG SD++ ETS+++ + R G A L S+ T+ SWNAL+ G
Sbjct: 267 EGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGL 325
Query: 106 LKSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++ A++ M+ E++V PD +T AN L +C
Sbjct: 326 NRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361
>gb|EEC70623.1| hypothetical protein OsI_01881 [Oryza sativa Indica Group]
Length = 381
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR IG SD++ ETS+++ + R G A L S+ T+ SWNAL+ G
Sbjct: 174 EGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGL 232
Query: 106 LKSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++ A++ M+ E++V PD +T AN L +C
Sbjct: 233 NRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 268
>gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
Length = 920
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR IG SD++ ETS+++ + R G A L S+ T+ SWNAL+ G
Sbjct: 267 EGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGL 325
Query: 106 LKSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++ A++ M+ E++V PD +T AN L +C
Sbjct: 326 NRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361
>gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indica Group]
Length = 870
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR IG SD++ ETS+++ + R G A L S+ T+ SWNAL+ G
Sbjct: 225 EGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGL 283
Query: 106 LKSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++ A++ M+ E++V PD +T AN L +C
Sbjct: 284 NRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 319
>gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis]
Length = 814
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = -3
Query: 283 GKSIHAYAIRREIGWSDEV-FETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
GKS HAYAIR G+ +V T+L+DM+ + G + L + +S KT+ SWN+++ GY
Sbjct: 260 GKSTHAYAIRA--GFDSKVNIATALVDMYSKCGSVETARLIFNRISEKTVVSWNSMIDGY 317
Query: 106 LKSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
++++ P EALK+F +M++E P +T L +C
Sbjct: 318 VQNEDPEEALKIFQRMLEEGFEPTNVTIMESLHAC 352
>ref|XP_006644161.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like isoform X1 [Oryza brachyantha]
gi|573912922|ref|XP_006644162.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21300-like isoform X2 [Oryza brachyantha]
Length = 804
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR IG SD++ ETS+++++ R G L S+ T+ SWNA++ G
Sbjct: 267 EGKSLHCYSIRRAIGVSDDILETSIVNLYTRCGAYQSATAVLRN-SKGTVASWNAMLSGL 325
Query: 106 LKSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++ A++ M+ +++V PD +T AN L +C
Sbjct: 326 ARAGQSFNAIQYLSAMMHDHKVTPDSVTFANVLSAC 361
>ref|XP_004983975.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like isoform X1 [Setaria italica]
gi|514818548|ref|XP_004983976.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21300-like isoform X2 [Setaria italica]
Length = 802
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR IG SDEV ETSL+ M+ R G + L S +++ SWNAL+ G
Sbjct: 263 EGKSVHCYSIRRGIGVSDEVLETSLVHMYSRCGAYQLASAVLKN-SMQSVASWNALLAGL 321
Query: 106 LKSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++ A+ F + E++V PD +T AN + +C
Sbjct: 322 ARTGQSGSAIHHFSVTLHEHKVIPDSVTYANVISAC 357
>ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
gi|241918961|gb|EER92105.1| hypothetical protein
SORBIDRAFT_01g032140 [Sorghum bicolor]
Length = 805
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+ RR IG SDEV TSL+ M+M+ G + +L + +++ SWNA++ G
Sbjct: 265 EGKSVHCYSTRRGIGVSDEVLGTSLVHMYMQCGAYQLASASLKNLV-QSVASWNAMLAGL 323
Query: 106 LKSQPPLEALKVFHQMVQENR-VPDLITSANGLLSC 2
+++ A+ F M+ E++ VPD +T AN + +C
Sbjct: 324 VRTGQSGNAIHHFSVMLHEHKVVPDSVTYANLISAC 359
>ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [Amborella trichopoda]
gi|548838849|gb|ERM99184.1| hypothetical protein
AMTR_s00092p00078040 [Amborella trichopoda]
Length = 716
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = -3
Query: 283 GKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGYL 104
GK +HA+++R I + V + SL+DM+ + G +K L +S KT+ SW+ +V GY+
Sbjct: 346 GKQLHAHSVRNCIAYEVTV-QNSLIDMYSKCGDLEKSHLIFEKLSNKTVVSWSCIVQGYV 404
Query: 103 KSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
+ + +EAL ++ QM+ E PD IT N L +C
Sbjct: 405 RHERSVEALALYAQMMHEGMRPDSITLVNVLPAC 438
>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 483
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
+GK +H +RR GW D + E++L+D++ + G D + M+ + + +WN+++ G+
Sbjct: 371 QGKEVHCQYVRRG-GWRDVIIESALVDLYAKCGCIDFAHRIFTKMTVRNLITWNSMICGF 429
Query: 106 LKSQPPLEALKVFHQMVQENRVPDLITSANGLLSC 2
++ EAL++F +MV+E PD IT L +C
Sbjct: 430 AQNGWAEEALRIFDEMVKEGTKPDYITFIGVLFAC 464
>gb|EEC73759.1| hypothetical protein OsI_08419 [Oryza sativa Indica Group]
Length = 725
Score = 63.2 bits (152), Expect = 3e-08
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = -3
Query: 286 EGKSIHAYAIRREIGWSDEVFETSLMDMHMRSGPPDKVALNLSTMSRKTIGSWNALVVGY 107
EGKS+H Y+IRR I SD + ET +++++ R G L S+ T SWNA++ G
Sbjct: 150 EGKSLHCYSIRRAIVVSDYILETCIVNLYTRCGAYQSAVATLQN-SKGTAASWNAMLSGL 208
Query: 106 LKSQPPLEALKVFHQMVQENRV-PDLITSANGLLSC 2
++ +A+ M+ E+++ PD +T AN + +C
Sbjct: 209 TRAGQSFDAIHYLSVMLHEHKITPDSVTFANVISAC 244