BLASTX nr result

ID: Catharanthus23_contig00026899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026899
         (234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476512.1| PREDICTED: uncharacterized protein LOC102618...    58   2e-06
dbj|BAB08518.1| unnamed protein product [Arabidopsis thaliana]         57   3e-06
gb|AAX23922.1| hypothetical protein At5g41470 [Arabidopsis thali...    57   3e-06
ref|NP_198962.2| Nuclear transport factor 2 (NTF2) family protei...    57   3e-06

>ref|XP_006476512.1| PREDICTED: uncharacterized protein LOC102618613 [Citrus sinensis]
          Length = 282

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%)
 Frame = -2

Query: 233 QLDRLLSVECFFEDYSFPKPFQGKQV*YIPQFFSY*SDGKLSR*LIDSKSLQEVLNFFKQ 54
           +L+  +S +C FED SFPKPFQGK+                           EV+ F +Q
Sbjct: 98  RLETYISDDCCFEDCSFPKPFQGKK---------------------------EVMQFLEQ 130

Query: 53  LITSMGQNVEFNVEHLC 3
           L+TSMGQNV+F+VE +C
Sbjct: 131 LVTSMGQNVKFSVEQVC 147


>dbj|BAB08518.1| unnamed protein product [Arabidopsis thaliana]
          Length = 158

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = -2

Query: 233 QLDRLLSVECFFEDYSFPKPFQGKQV*YIPQFFSY*SDGKLSR*LIDSKSLQEVLNFFKQ 54
           QL   +S +CF +D+SFPKPF+GK                           QE + FF++
Sbjct: 93  QLSSCISSDCFIDDFSFPKPFRGK---------------------------QEAMEFFEE 125

Query: 53  LITSMGQNVEFNVEHLC 3
           L+ SMGQNV+F VE++C
Sbjct: 126 LVKSMGQNVKFCVENVC 142


>gb|AAX23922.1| hypothetical protein At5g41470 [Arabidopsis thaliana]
           gi|71905583|gb|AAZ52769.1| hypothetical protein
           At5g41470 [Arabidopsis thaliana]
          Length = 198

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = -2

Query: 233 QLDRLLSVECFFEDYSFPKPFQGKQV*YIPQFFSY*SDGKLSR*LIDSKSLQEVLNFFKQ 54
           QL   +S +CF +D+SFPKPF+GK                           QE + FF++
Sbjct: 14  QLSSCISSDCFIDDFSFPKPFRGK---------------------------QEAMEFFEE 46

Query: 53  LITSMGQNVEFNVEHLC 3
           L+ SMGQNV+F VE++C
Sbjct: 47  LVKSMGQNVKFCVENVC 63


>ref|NP_198962.2| Nuclear transport factor 2 (NTF2) family protein [Arabidopsis
           thaliana] gi|332007299|gb|AED94682.1| Nuclear transport
           factor 2 (NTF2) family protein [Arabidopsis thaliana]
          Length = 277

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/77 (37%), Positives = 41/77 (53%)
 Frame = -2

Query: 233 QLDRLLSVECFFEDYSFPKPFQGKQV*YIPQFFSY*SDGKLSR*LIDSKSLQEVLNFFKQ 54
           QL   +S +CF +D+SFPKPF+GK                           QE + FF++
Sbjct: 93  QLSSCISSDCFIDDFSFPKPFRGK---------------------------QEAMEFFEE 125

Query: 53  LITSMGQNVEFNVEHLC 3
           L+ SMGQNV+F VE++C
Sbjct: 126 LVKSMGQNVKFCVENVC 142


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