BLASTX nr result
ID: Catharanthus23_contig00026839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00026839
(376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004248875.1| PREDICTED: putative pentatricopeptide repeat... 131 1e-28
ref|XP_006365930.1| PREDICTED: putative pentatricopeptide repeat... 129 3e-28
gb|EOX97822.1| Pentatricopeptide repeat-containing protein [Theo... 116 3e-24
ref|XP_004292440.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_003604017.1| Pentatricopeptide repeat-containing protein ... 108 6e-22
ref|XP_006582458.1| PREDICTED: pentatricopeptide repeat-containi... 105 6e-21
ref|XP_006487291.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
gb|ESW15550.1| hypothetical protein PHAVU_007G081500g [Phaseolus... 101 9e-20
ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 101 1e-19
ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
gb|EPS66401.1| hypothetical protein M569_08375, partial [Genlise... 99 4e-19
ref|XP_006423535.1| hypothetical protein CICLE_v10030191mg [Citr... 83 4e-14
emb|CBI37965.3| unnamed protein product [Vitis vinifera] 80 3e-13
ref|XP_004500755.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_002323212.2| pentatricopeptide repeat-containing family p... 69 5e-10
gb|EOY02945.1| Pentatricopeptide repeat (PPR) superfamily protei... 68 1e-09
gb|ESW28178.1| hypothetical protein PHAVU_003G265400g [Phaseolus... 66 4e-09
ref|XP_006659356.1| PREDICTED: putative pentatricopeptide repeat... 65 9e-09
ref|XP_003623821.1| Pentatricopeptide repeat-containing protein ... 65 9e-09
>ref|XP_004248875.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Solanum lycopersicum]
Length = 599
Score = 131 bits (329), Expect = 1e-28
Identities = 59/88 (67%), Positives = 76/88 (86%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
++SHFSQNG+H LALRTFSFMHF G+ IDSY LCS++T+SS K++ FG+ IH LV+KSG
Sbjct: 210 ILSHFSQNGFHSLALRTFSFMHFGGIGIDSYTLCSSITASSAVKDVKFGRMIHTLVRKSG 269
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
W SV+VGSAL+DLYAKSLC ++A++LF
Sbjct: 270 WFSSVYVGSALVDLYAKSLCIKNAAKLF 297
>ref|XP_006365930.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Solanum tuberosum]
Length = 481
Score = 129 bits (325), Expect = 3e-28
Identities = 57/88 (64%), Positives = 76/88 (86%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
++SHFSQNG+H LALRTFSFMHF G++IDSY LCS++T+SS K++ FG+ IH LV+KSG
Sbjct: 92 ILSHFSQNGFHSLALRTFSFMHFGGIDIDSYTLCSSITASSAVKDVKFGQMIHTLVRKSG 151
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
W SV+VG AL+DLYAKSLC ++A+++F
Sbjct: 152 WFSSVYVGCALVDLYAKSLCIKNAAKMF 179
>gb|EOX97822.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 470
Score = 116 bits (291), Expect = 3e-24
Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 5/130 (3%)
Frame = -1
Query: 376 TPSIQTKVIFSYI-----KNNWGVXXXXXXXXXXXXXXXXXSVISHFSQNGYHFLALRTF 212
+P+IQ+K+IF+Y+ K N + +IS FS+NG+ F AL+TF
Sbjct: 38 SPNIQSKLIFTYVTCLGGKPNLKILTNCFKSINPKNPVPFNVIISDFSKNGFAFFALKTF 97
Query: 211 SFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSGWLRSVFVGSALIDLYAKS 32
SFMHFNG+ +D+YALC +LT+SS ++ FG++IH + KSGWL SVFV SAL+DLY+K
Sbjct: 98 SFMHFNGISLDTYALCGSLTASSSLRSAEFGRQIHAHLAKSGWLSSVFVVSALVDLYSKL 157
Query: 31 LCFRDASELF 2
DA+ LF
Sbjct: 158 SLIADAAVLF 167
>ref|XP_004292440.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Fragaria vesca subsp. vesca]
Length = 489
Score = 110 bits (274), Expect = 2e-22
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+IS +NG++FLAL+T SFMH +GV ID+YALCS+LT++S +++ FG++IH V KSG
Sbjct: 102 LISDLCRNGFNFLALKTLSFMHCSGVSIDTYALCSSLTAASSIQDVSFGREIHAHVAKSG 161
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
W SVFVGSALIDLYAKSL DA +F
Sbjct: 162 WCSSVFVGSALIDLYAKSLLIGDADRMF 189
>ref|XP_003604017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493065|gb|AES74268.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 742
Score = 108 bits (271), Expect = 6e-22
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+ISHF + G+ FLAL TFSFMH N V +D+YALCS LT+SS K++ FGK+IH V+KSG
Sbjct: 268 IISHFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTLTASSKFKDVNFGKQIHAHVEKSG 327
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
W SVFVGSALID Y+K L +DA+ +F
Sbjct: 328 WSSSVFVGSALIDFYSKLLNVKDAALVF 355
>ref|XP_006582458.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 458
Score = 105 bits (262), Expect = 6e-21
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = -1
Query: 262 ISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSGW 83
IS F + G+ FLAL +FSFMH NGV +D+YALCS LT+SS K+L GK+IH V+KSGW
Sbjct: 80 ISDFCRKGFPFLALSSFSFMHTNGVPLDTYALCSTLTASSKVKDLNLGKQIHAQVEKSGW 139
Query: 82 LRSVFVGSALIDLYAKSLCFRDASELF 2
SVFVGSALIDLY+K +DA+ +F
Sbjct: 140 SSSVFVGSALIDLYSKLSNVKDAAHVF 166
>ref|XP_006487291.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Citrus sinensis]
Length = 424
Score = 103 bits (258), Expect = 2e-20
Identities = 52/88 (59%), Positives = 65/88 (73%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
VIS F +NG AL+TFSFMH +G+ +D+YALCS+LT+S+ K+ FGK++ V KSG
Sbjct: 34 VISDFCRNGSPLYALKTFSFMHVHGIFLDTYALCSSLTASTSVKDARFGKQVQAHVTKSG 93
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
WL SVFVGSALIDLYAK L DA +F
Sbjct: 94 WLSSVFVGSALIDLYAKLLLIHDAGLMF 121
>ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 469
Score = 103 bits (258), Expect = 2e-20
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+IS FS++G+ AL FSFMH NGV ID+YALCS+L S +N+++GK+IH V KSG
Sbjct: 82 MISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSFVQNVVYGKQIHAFVGKSG 141
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
WL SVFVGSA++D+YAK+ DA E+F
Sbjct: 142 WLCSVFVGSAIVDMYAKNSLIYDAVEVF 169
>gb|ESW15550.1| hypothetical protein PHAVU_007G081500g [Phaseolus vulgaris]
Length = 470
Score = 101 bits (252), Expect = 9e-20
Identities = 52/88 (59%), Positives = 65/88 (73%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+IS F + G+ FLAL +FSFMH NGV +D+YALCS LT+SS K+L FGK+IH KSG
Sbjct: 79 IISDFCRKGFPFLALASFSFMHTNGVPLDTYALCSTLTASSKVKDLNFGKQIHTQGVKSG 138
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
W SVFVGSALID Y+K +DA+ +F
Sbjct: 139 WSSSVFVGSALIDFYSKLSNVQDATLMF 166
>ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g18750, chloroplastic-like [Cucumis sativus]
Length = 497
Score = 101 bits (251), Expect = 1e-19
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+IS FS++G+ AL FSFMH NGV ID+YALCS+L S + +++GK+IH V KSG
Sbjct: 110 MISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSLFRXVVYGKQIHAFVGKSG 169
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
WL SVFVGSA++D+YAK+ DA E+F
Sbjct: 170 WLCSVFVGSAIVDMYAKNSLIYDAVEVF 197
>ref|XP_003523507.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 472
Score = 101 bits (251), Expect = 1e-19
Identities = 51/88 (57%), Positives = 64/88 (72%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+IS F + G FLAL +FSF+H NGV +D+YALCS LT+SS K+L GK+IH V KSG
Sbjct: 79 IISDFCRKGLPFLALASFSFVHANGVPLDTYALCSTLTASSKVKDLNLGKQIHAHVAKSG 138
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
W SVFVGSALID Y+K +DA+ +F
Sbjct: 139 WSSSVFVGSALIDFYSKLSNVKDAAHMF 166
>gb|EPS66401.1| hypothetical protein M569_08375, partial [Genlisea aurea]
Length = 374
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/87 (55%), Positives = 64/87 (73%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
++S+FS+ H LAL TFSFMH N V DSYALCS+L S+S +N+ G+ +H V KSG
Sbjct: 4 ILSYFSRYASHRLALHTFSFMHHNTVFSDSYALCSSLNSASVLENVCLGRILHAHVHKSG 63
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASEL 5
WL SVFVGSAL+D Y+K C +DA+++
Sbjct: 64 WLASVFVGSALVDFYSKICCLKDAAKV 90
>ref|XP_006423535.1| hypothetical protein CICLE_v10030191mg [Citrus clementina]
gi|557525469|gb|ESR36775.1| hypothetical protein
CICLE_v10030191mg [Citrus clementina]
Length = 371
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/68 (58%), Positives = 51/68 (75%)
Frame = -1
Query: 205 MHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSGWLRSVFVGSALIDLYAKSLC 26
MH +G+ +D+YALCS+LT+S+ K+ FGK++ V KSGWL SVFVGSALIDLYAK L
Sbjct: 1 MHVHGIFLDTYALCSSLTASTSVKDARFGKQVQAHVTKSGWLSSVFVGSALIDLYAKLLL 60
Query: 25 FRDASELF 2
DA +F
Sbjct: 61 IHDAELMF 68
>emb|CBI37965.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = -1
Query: 205 MHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSGWLRSVFVGSALIDLYAKSLC 26
MH NGV +D+Y+ C +L +S KN+ FG +IH V+KSGWL SVFVGSAL+D+YAK
Sbjct: 1 MHTNGVPLDTYSFCCSLVASCSMKNVKFGAQIHARVEKSGWLSSVFVGSALVDMYAKLSL 60
Query: 25 FRDASELF 2
DA+ +F
Sbjct: 61 INDAAMVF 68
>ref|XP_004500755.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cicer arietinum]
Length = 458
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKS 89
+ISHF G+ FLAL +FSFMH N + +D+YALCS LT+SS K+ FGK+IH V KS
Sbjct: 92 IISHFCHKGFPFLALASFSFMHTNAIPLDTYALCSTLTASSKLKDFHFGKQIHAHVGKS 150
>ref|XP_002323212.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320693|gb|EEF04973.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 584
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+IS +SQ GYH ALR + +M V +D + L L+S S L G K+H + + G
Sbjct: 182 MISCYSQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKG 241
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
LR+VFVG+ALID+YAK A E+F
Sbjct: 242 LLRNVFVGNALIDMYAKCGSLDGALEVF 269
>gb|EOY02945.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 818
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+IS + Q G+H L F+ MH GV D S L +S+ +L GK++H V ++G
Sbjct: 416 LISGYVQKGFHEEGLNLFNEMHKAGVRADQATFASMLKASANLASLSLGKQLHSFVIRTG 475
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
++ +VF GSAL+D+YAK +DA +LF
Sbjct: 476 FMSNVFSGSALLDMYAKCGSIKDAIQLF 503
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+I+ FS++G + A+ F M G + + L++ G L FGK+IHGL+ K+G
Sbjct: 214 LITGFSKDGLYEDAISLFLEMQNFGYKPSDFTFAGVLSAGIGLNALAFGKQIHGLLVKTG 273
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
++ +VFV +AL+D Y+K C +A F
Sbjct: 274 FVWNVFVANALLDFYSKHDCLVEARRFF 301
>gb|ESW28178.1| hypothetical protein PHAVU_003G265400g [Phaseolus vulgaris]
Length = 619
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/88 (36%), Positives = 56/88 (63%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+++ + QNG+H L F F G E D++ + SA+++ +G L+ GK++H + KSG
Sbjct: 217 MMAGYVQNGFHEETLLLFHNAQFMGFEQDAFMISSAVSACAGLATLVEGKQLHAISHKSG 276
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
+ +++V S+LID+YAK C R+A +F
Sbjct: 277 FGSNIYVSSSLIDMYAKCGCIREAYLVF 304
>ref|XP_006659356.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Oryza brachyantha]
Length = 699
Score = 65.1 bits (157), Expect = 9e-09
Identities = 38/88 (43%), Positives = 54/88 (61%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+++ +SQ+G++ ALR F M + ID YA +AL SSS L GK+IHGLV SG
Sbjct: 373 MLTGYSQHGFNADALRFFRCMRSENIRIDEYAFSAALRSSSELAVLQLGKQIHGLVIHSG 432
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASELF 2
+ + FV S+LI +Y+KS DA + F
Sbjct: 433 FSSNDFVSSSLIFMYSKSGIIDDARQSF 460
>ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 837
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = -1
Query: 265 VISHFSQNGYHFLALRTFSFMHFNGVEIDSYALCSALTSSSGDKNLIFGKKIHGLVKKSG 86
+++ ++QNG + A+ F +MH GVE + Y + LT+ S FG+++HG + KSG
Sbjct: 236 MVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG 295
Query: 85 WLRSVFVGSALIDLYAKSLCFRDASEL 5
+ +V+V SAL+D+YAK ++A +
Sbjct: 296 FGSNVYVQSALVDMYAKCGDLKNAKNM 322