BLASTX nr result

ID: Catharanthus23_contig00026829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026829
         (386 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356616.1| PREDICTED: RNA-binding protein 48-like [Sola...    59   5e-07
ref|XP_004245239.1| PREDICTED: multiple RNA-binding domain-conta...    57   3e-06
ref|XP_004245238.1| PREDICTED: multiple RNA-binding domain-conta...    57   3e-06
ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [...    56   4e-06
ref|XP_004951201.1| PREDICTED: RNA-binding protein 48-like [Seta...    56   6e-06
ref|XP_003541147.1| PREDICTED: RNA-binding protein 48 isoform X1...    55   1e-05
gb|ACU17018.1| unknown [Glycine max]                                   55   1e-05
ref|XP_002451350.1| hypothetical protein SORBIDRAFT_04g000550 [S...    55   1e-05

>ref|XP_006356616.1| PREDICTED: RNA-binding protein 48-like [Solanum tuberosum]
          Length = 230

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 22/27 (81%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           CKPMDAEDCEP+TDV+WI+FC+V+NAR
Sbjct: 50  CKPMDAEDCEPFTDVFWIRFCRVDNAR 76


>ref|XP_004245239.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform 2 [Solanum lycopersicum]
          Length = 230

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           CKPMD EDCEP+TDV+WI+FC+V+NAR
Sbjct: 50  CKPMDDEDCEPFTDVFWIRFCRVDNAR 76


>ref|XP_004245238.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform 1 [Solanum lycopersicum]
          Length = 238

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 21/27 (77%), Positives = 26/27 (96%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           CKPMD EDCEP+TDV+WI+FC+V+NAR
Sbjct: 58  CKPMDDEDCEPFTDVFWIRFCRVDNAR 84


>ref|XP_002263764.1| PREDICTED: UPF0712 protein C7orf64 homolog [Vitis vinifera]
           gi|297739067|emb|CBI28556.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           CKPMDAEDCEP+TDVYWIKF  V+NAR
Sbjct: 50  CKPMDAEDCEPFTDVYWIKFRLVSNAR 76


>ref|XP_004951201.1| PREDICTED: RNA-binding protein 48-like [Setaria italica]
          Length = 222

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           CKPMDAEDCEPYTDV++IKF QV+NAR
Sbjct: 50  CKPMDAEDCEPYTDVFFIKFSQVSNAR 76


>ref|XP_003541147.1| PREDICTED: RNA-binding protein 48 isoform X1 [Glycine max]
           gi|571492118|ref|XP_006592132.1| PREDICTED: RNA-binding
           protein 48 isoform X2 [Glycine max]
           gi|571492120|ref|XP_006592133.1| PREDICTED: RNA-binding
           protein 48 isoform X3 [Glycine max]
          Length = 221

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           CKPMDAEDCE YTDV+WIKF  VNNAR
Sbjct: 50  CKPMDAEDCEKYTDVFWIKFRLVNNAR 76


>gb|ACU17018.1| unknown [Glycine max]
          Length = 216

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           CKPMDAEDCE YTDV+WIKF  VNNAR
Sbjct: 50  CKPMDAEDCEKYTDVFWIKFRLVNNAR 76


>ref|XP_002451350.1| hypothetical protein SORBIDRAFT_04g000550 [Sorghum bicolor]
           gi|241931181|gb|EES04326.1| hypothetical protein
           SORBIDRAFT_04g000550 [Sorghum bicolor]
          Length = 205

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +2

Query: 2   CKPMDAEDCEPYTDVYWIKFCQVNNAR 82
           C PMDAEDCEPYTDV+++KF QVNNAR
Sbjct: 50  CTPMDAEDCEPYTDVFFVKFSQVNNAR 76


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