BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026745
         (857 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chro...    50   9e-08
ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chro...    49   6e-06
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro...    49   7e-06

>ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B-like [Solanum lycopersicum]
          Length = 168

 Score = 49.7 bits (117), Expect(2) = 9e-08
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = -3

Query: 351 NGNAVKIILDKKTRKSLGFACIWFSTVDFAQ*AVQEMNGE 232
           N N VKI+ DKK+++SLGFA IWF   + AQ A++EMNG+
Sbjct: 101 NVNRVKIVTDKKSKESLGFAYIWFPDNESAQSAIREMNGK 140



 Score = 33.9 bits (76), Expect(2) = 9e-08
 Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 13/102 (12%)
 Frame = -1

Query: 716 MALFCSICKFPIICPQSKRKFAIQRLLS-------SIPVIQ------TANFPKVSHFNPX 576
           MALFCS+C   +I P      +  R +S       S+P+        T    K SHF   
Sbjct: 1   MALFCSLCNNSLISPSPSFTSSAVRHVSAFKPQFLSLPIFSFKQSYLTDLSQKKSHFPKC 60

Query: 575 XXXXXXXXXXXXXXXXXXXSATSTAVIFVKGLAQSVSEGTLK 450
                                 ST +IF+KGLA+S  EG LK
Sbjct: 61  SDSSVVQQNDDDD---------STTIIFLKGLAKSTPEGRLK 93


>ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B-like isoform X2 [Solanum tuberosum]
          Length = 156

 Score = 49.3 bits (116), Expect(2) = 6e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -3

Query: 339 VKIILDKKTRKSLGFACIWFSTVDFAQ*AVQEMNGEV 229
           VKII DKK+++SLGFA IWF   + AQ AVQEMNG++
Sbjct: 105 VKIITDKKSKESLGFAYIWFPDNESAQAAVQEMNGKM 141



 Score = 28.1 bits (61), Expect(2) = 6e-06
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 506 TAVIFVKGLAQSVSEGTLK 450
           T +IF+KGLA+S  EG LK
Sbjct: 75  TTIIFLKGLAKSTPEGRLK 93


>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
           B-like isoform X1 [Solanum tuberosum]
          Length = 168

 Score = 48.9 bits (115), Expect(2) = 7e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -3

Query: 339 VKIILDKKTRKSLGFACIWFSTVDFAQ*AVQEMNGE 232
           VKII DKK+++SLGFA IWF   + AQ AVQEMNG+
Sbjct: 105 VKIITDKKSKESLGFAYIWFPDNESAQAAVQEMNGK 140



 Score = 28.1 bits (61), Expect(2) = 7e-06
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 506 TAVIFVKGLAQSVSEGTLK 450
           T +IF+KGLA+S  EG LK
Sbjct: 75  TTIIFLKGLAKSTPEGRLK 93