BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026644
         (1135 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   345   3e-92
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        341   3e-91
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   341   3e-91
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   339   1e-90
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   339   1e-90
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   339   1e-90
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              339   1e-90
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   338   2e-90
ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citr...   338   2e-90
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe...   338   2e-90
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   338   3e-90
ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Caps...   338   3e-90
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           337   5e-90
ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mit...   336   9e-90
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   336   9e-90
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           336   1e-89
gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24...   335   3e-89
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   332   2e-88
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   332   2e-88
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   331   3e-88

>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
            gi|557086377|gb|ESQ27229.1| hypothetical protein
            EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  345 bits (884), Expect = 3e-92
 Identities = 158/212 (74%), Positives = 189/212 (89%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG PK+KEG+I AP+SKVLLDDGKT+RV+LA GSG EASQEA+T
Sbjct: 268  WNKACEAMYQQYWALVIGSPKDKEGVISAPISKVLLDDGKTDRVVLARGSGFEASQEAIT 327

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSW+EL+P TSRKHQLRVHCAEALGTPIVGD+KYGWFVH+KWKQMP++D
Sbjct: 328  EYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKKWKQMPQVD 387

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP S +PY++RRPEGLD+QKGSVLSKVPLLHLH RE+VLPN+ KFL   +N + ++  P
Sbjct: 388  IEPTSGKPYKLRRPEGLDIQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNNQEIDSLHP 447

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
                +SKP++ RFVAS+PSHMKISWN+MS+YL
Sbjct: 448  --GIISKPDLLRFVASMPSHMKISWNIMSSYL 477


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  341 bits (875), Expect = 3e-91
 Identities = 158/213 (74%), Positives = 187/213 (87%), Gaps = 1/213 (0%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG PKEKEGLI APLSKVLLDDGKT+RV+LA GSG EASQ+A+T
Sbjct: 116  WNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAIT 175

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EY+VLGP INGCSW+EL+P TSRKHQLRVHCAEALGTPIVGD+KYGWFVH++WKQMP++D
Sbjct: 176  EYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVD 235

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL   H    + + P
Sbjct: 236  IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL---HVMNQQETEP 292

Query: 494  MHKE-VSKPNVFRFVASLPSHMKISWNLMSAYL 399
            +H   + KP++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 293  LHTGIIDKPDLLRFVASMPSHMKISWNLMSSYL 325


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
            gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
            pseudouridine synthase 3, mitochondrial; AltName:
            Full=RNA pseudouridylate synthase 3; AltName:
            Full=RNA-uridine isomerase 3; Flags: Precursor
            gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
            thaliana] gi|56790228|gb|AAW30031.1| At1g78910
            [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
            pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  341 bits (875), Expect = 3e-91
 Identities = 158/213 (74%), Positives = 187/213 (87%), Gaps = 1/213 (0%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG PKEKEGLI APLSKVLLDDGKT+RV+LA GSG EASQ+A+T
Sbjct: 268  WNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAIT 327

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EY+VLGP INGCSW+EL+P TSRKHQLRVHCAEALGTPIVGD+KYGWFVH++WKQMP++D
Sbjct: 328  EYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVD 387

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL   H    + + P
Sbjct: 388  IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL---HVMNQQETEP 444

Query: 494  MHKE-VSKPNVFRFVASLPSHMKISWNLMSAYL 399
            +H   + KP++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 445  LHTGIIDKPDLLRFVASMPSHMKISWNLMSSYL 477


>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  339 bits (870), Expect = 1e-90
 Identities = 161/212 (75%), Positives = 183/212 (86%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ AC+  YQ++WALVIG PKEKEGLICAPLSK+LLDDGKTERVILA   GLEASQEA+T
Sbjct: 262  WNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERVILAQNVGLEASQEAIT 321

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSWIEL+P TSRKHQLRVHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D
Sbjct: 322  EYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 381

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL    N   ET  P
Sbjct: 382  IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLPVL-NKNTETLPP 440

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
                  KP++ RFVA++P HMKISWNLMS+YL
Sbjct: 441  ALS--MKPDLLRFVATMPKHMKISWNLMSSYL 470


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
            lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
            ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  339 bits (870), Expect = 1e-90
 Identities = 159/212 (75%), Positives = 185/212 (87%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG PKEKEGLI APLSKVLLDDGKT+RV+LA GSG EASQEA+T
Sbjct: 267  WNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQEAIT 326

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSW+EL+P TSRKHQLRVHCAEALGT IVGD+KYGWFVH++WKQMP++D
Sbjct: 327  EYRVLGPMINGCSWLELRPITSRKHQLRVHCAEALGTSIVGDYKYGWFVHKRWKQMPQVD 386

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL   +  + ET   
Sbjct: 387  IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLN--QQETEPL 444

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
                + KP++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 445  RTGIIDKPDLLRFVASMPSHMKISWNLMSSYL 476


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  339 bits (870), Expect = 1e-90
 Identities = 163/212 (76%), Positives = 184/212 (86%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W  ACEAT Q+YWALVIG PK+KEG+I APLSKVLLDDGKTERVILA+ SGLEASQEA+T
Sbjct: 268  WDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAIT 327

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSWIEL P TSRKHQLRVHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D
Sbjct: 328  EYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 387

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            LEP + +PY+MRRPEGLDVQKGSVLSKVPLLHLH RE++LPN+ KFL    + K +    
Sbjct: 388  LEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPIL-DPKPKNQNQ 446

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
              K   KP++ RFVAS+P+HMKISWNLMS+YL
Sbjct: 447  YPKLSLKPDILRFVASMPNHMKISWNLMSSYL 478


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  339 bits (870), Expect = 1e-90
 Identities = 163/212 (76%), Positives = 184/212 (86%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W  ACEAT Q+YWALVIG PK+KEG+I APLSKVLLDDGKTERVILA+ SGLEASQEA+T
Sbjct: 270  WDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAIT 329

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSWIEL P TSRKHQLRVHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D
Sbjct: 330  EYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 389

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            LEP + +PY+MRRPEGLDVQKGSVLSKVPLLHLH RE++LPN+ KFL    + K +    
Sbjct: 390  LEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPIL-DPKPKNQNQ 448

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
              K   KP++ RFVAS+P+HMKISWNLMS+YL
Sbjct: 449  YPKLSLKPDILRFVASMPNHMKISWNLMSSYL 480


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
            gi|557538602|gb|ESR49646.1| hypothetical protein
            CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  338 bits (868), Expect = 2e-90
 Identities = 158/212 (74%), Positives = 181/212 (85%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG PKEK+G+I APLSKVLLDDGKTER+ILA  SGLEASQEAVT
Sbjct: 259  WNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVT 318

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSWIEL+P T RKHQLRVHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D
Sbjct: 319  EYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 378

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP S +PY++RRP+GLDVQKGSVLSKVPLLHLH RE+VLPN+ KF    +         
Sbjct: 379  IEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPT 438

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
            +  +   P++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 439  LSSKPDGPDLLRFVASMPSHMKISWNLMSSYL 470


>ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
            gi|557538601|gb|ESR49645.1| hypothetical protein
            CICLE_v10031422mg [Citrus clementina]
          Length = 343

 Score =  338 bits (868), Expect = 2e-90
 Identities = 158/212 (74%), Positives = 181/212 (85%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG PKEK+G+I APLSKVLLDDGKTER+ILA  SGLEASQEAVT
Sbjct: 131  WNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVT 190

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSWIEL+P T RKHQLRVHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D
Sbjct: 191  EYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 250

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP S +PY++RRP+GLDVQKGSVLSKVPLLHLH RE+VLPN+ KF    +         
Sbjct: 251  IEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPT 310

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
            +  +   P++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 311  LSSKPDGPDLLRFVASMPSHMKISWNLMSSYL 342


>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  338 bits (868), Expect = 2e-90
 Identities = 163/212 (76%), Positives = 184/212 (86%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W  ACEA YQ+YWALVIG PKEKEGLICAPLSKVLLD+GKTERVILAH SGLEASQ+A+T
Sbjct: 262  WDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVILAHQSGLEASQKAIT 321

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            +YRVLGP INGCSWIEL+P TSRKHQLRVHCAEALGTPIVGD+KYGWFVHR+WKQMP +D
Sbjct: 322  QYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHVD 381

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP S  PY++RRP GLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL    + K ++  P
Sbjct: 382  VEPTSGLPYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL-LILDQKLDSLHP 440

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
                 SKP++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 441  AVS--SKPDILRFVASMPSHMKISWNLMSSYL 470


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
            sinensis]
          Length = 471

 Score =  338 bits (866), Expect = 3e-90
 Identities = 156/212 (73%), Positives = 182/212 (85%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG P+EK+G+I APLSKVLLDDGKTER+ILA  SGLEASQEA+T
Sbjct: 259  WNDACEAMYQRYWALVIGSPREKQGIIRAPLSKVLLDDGKTERIILAQNSGLEASQEAMT 318

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSWIEL+P T RKHQLRVHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D
Sbjct: 319  EYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVD 378

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP S +PY++RRP+GLDVQKGSVLSKVPLLHLH RE+VLPN+ KF+   +         
Sbjct: 379  IEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFINVLNQKSDNLFPT 438

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
            +  +   P++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 439  LSSKPDGPDLLRFVASMPSHMKISWNLMSSYL 470


>ref|XP_006300371.1| hypothetical protein CARUB_v10022381mg [Capsella rubella]
            gi|482569081|gb|EOA33269.1| hypothetical protein
            CARUB_v10022381mg [Capsella rubella]
          Length = 478

 Score =  338 bits (866), Expect = 3e-90
 Identities = 158/212 (74%), Positives = 185/212 (87%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ +CEA YQ+YWALVIG PKEKEGLI APLSKVLLDDGKT+RV+LA GS  EASQEA+T
Sbjct: 268  WNKSCEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSCFEASQEAIT 327

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSW+EL+P TSRKHQLRVHCAEALGTPIVGD+KYGWFVH++WKQMP++D
Sbjct: 328  EYRVLGPMINGCSWLELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVD 387

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL   +  + E  R 
Sbjct: 388  IEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVLNQQEAEPIRT 447

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
                + KP++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 448  --GIIDKPDLLRFVASMPSHMKISWNLMSSYL 477


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  337 bits (864), Expect = 5e-90
 Identities = 157/212 (74%), Positives = 187/212 (88%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQKYWALVIG PKEKEG+ICAPLSKVLL+DGKTERVILAH +G +ASQEA+T
Sbjct: 240  WNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAIT 299

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSW+EL+P TSRKHQLRVHCAEALGTPIVGD+KYGWFVH++WKQMP+++
Sbjct: 300  EYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVN 359

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP + +PY++RRPEGLDVQKGSV+SKVPLLHL  RE+VLPN+ KFL  + + K +   P
Sbjct: 360  IEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVF-DRKSQNQDP 418

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
              +  SKP++ RFVA +PSHMKISWNLMS+YL
Sbjct: 419  ALE--SKPDLLRFVARMPSHMKISWNLMSSYL 448


>ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 449

 Score =  336 bits (862), Expect = 9e-90
 Identities = 155/213 (72%), Positives = 183/213 (85%)
 Frame = -3

Query: 1037 DWSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAV 858
            DW+ ACEATYQ+YWALVIG PKEKEG+I APLSKVLL+DGKTER+ILAH S +E  QEAV
Sbjct: 239  DWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAV 298

Query: 857  TEYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRI 678
            TEYRVLGP INGCSW+EL+P T RKHQLRVHCAEALGTPIVGD+KYGWFVH +WKQMPR+
Sbjct: 299  TEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRV 358

Query: 677  DLEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSR 498
            D+EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KF+   +N   E   
Sbjct: 359  DIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRT 418

Query: 497  PMHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
             + ++   P+V RFVA++PSHM+ISWNLMS+YL
Sbjct: 419  SLREQ---PDVLRFVATMPSHMRISWNLMSSYL 448


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 476

 Score =  336 bits (862), Expect = 9e-90
 Identities = 155/213 (72%), Positives = 183/213 (85%)
 Frame = -3

Query: 1037 DWSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAV 858
            DW+ ACEATYQ+YWALVIG PKEKEG+I APLSKVLL+DGKTER+ILAH S +E  QEAV
Sbjct: 266  DWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAV 325

Query: 857  TEYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRI 678
            TEYRVLGP INGCSW+EL+P T RKHQLRVHCAEALGTPIVGD+KYGWFVH +WKQMPR+
Sbjct: 326  TEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRV 385

Query: 677  DLEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSR 498
            D+EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KF+   +N   E   
Sbjct: 386  DIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRT 445

Query: 497  PMHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
             + ++   P+V RFVA++PSHM+ISWNLMS+YL
Sbjct: 446  SLREQ---PDVLRFVATMPSHMRISWNLMSSYL 475


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  336 bits (861), Expect = 1e-89
 Identities = 157/212 (74%), Positives = 186/212 (87%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQKYWALVIG PKEKEG+ICAPLSKVLL+DGKTERVILAH +G +ASQEA+T
Sbjct: 240  WNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVILAHQTGFQASQEAIT 299

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGPMINGCSW+EL+P TSRKHQLRVHCAEALGTPIVGD+KYGW VH++WKQMP+++
Sbjct: 300  EYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWLVHKRWKQMPQVN 359

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP + +PY++RRPEGLDVQKGSV+SKVPLLHL  RE+VLPN+ KFL  + + K E   P
Sbjct: 360  IEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKFLRVF-DRKSENQDP 418

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
              +  SKP++ RFVA +PSHMKISWNLMS+YL
Sbjct: 419  ALE--SKPDLLRFVARMPSHMKISWNLMSSYL 448


>gb|AAC83020.1| Contains similarity to gi|1786244 hypothetical 24.9 kD protein in
            surA-hepA intergenic region yab0 from Escherichia coli
            genome gb|AE000116, and to hypothetical YABO family
            PF|00849 [Arabidopsis thaliana]
          Length = 491

 Score =  335 bits (858), Expect = 3e-89
 Identities = 158/219 (72%), Positives = 187/219 (85%), Gaps = 7/219 (3%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ ACEA YQ+YWALVIG PKEKEGLI APLSKVLLDDGKT+RV+LA GSG EASQ+A+T
Sbjct: 275  WNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAIT 334

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQ------LRVHCAEALGTPIVGDFKYGWFVHRKWK 693
            EY+VLGP INGCSW+EL+P TSRKHQ      LRVHCAEALGTPIVGD+KYGWFVH++WK
Sbjct: 335  EYKVLGPKINGCSWVELRPITSRKHQPPSKKQLRVHCAEALGTPIVGDYKYGWFVHKRWK 394

Query: 692  QMPRIDLEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGK 513
            QMP++D+EP + +PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL   H   
Sbjct: 395  QMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL---HVMN 451

Query: 512  HETSRPMHKE-VSKPNVFRFVASLPSHMKISWNLMSAYL 399
             + + P+H   + KP++ RFVAS+PSHMKISWNLMS+YL
Sbjct: 452  QQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSYL 490


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
            PREDICTED: RNA pseudouridine synthase 3,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
            pseudouridine synthase 3, mitochondrial-like isoform X3
            [Solanum tuberosum]
          Length = 475

 Score =  332 bits (850), Expect = 2e-88
 Identities = 161/230 (70%), Positives = 190/230 (82%), Gaps = 1/230 (0%)
 Frame = -3

Query: 1085 HICFPNHKRSFTFVF*DWSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTER 906
            H+ F N K+S +     W+ AC +TYQ+YWALVIG PKEKEG+I APL+KVLLDDG+TER
Sbjct: 251  HLLFSNTKKSKSLSK-AWNDACGSTYQRYWALVIGSPKEKEGVISAPLTKVLLDDGRTER 309

Query: 905  VILAHGSGLEASQEAVTEYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDF 726
            V+LA  SGLEAS EAVTEYR+LGPMINGCSWIEL+P+TSRKHQ+RVHCAEALGTPIVGD+
Sbjct: 310  VMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPHTSRKHQIRVHCAEALGTPIVGDY 369

Query: 725  KYGWFVHRKWKQMPRIDLEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNV 546
            KYGWFVHRKWKQMPR+D+EP + +PYR++RPEGLDVQKGSVLSKVPLLHLH RE+VLPN+
Sbjct: 370  KYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNI 429

Query: 545  EKFLEYYHNGKHETSRPMHKEV-SKPNVFRFVASLPSHMKISWNLMSAYL 399
             KF+E      H      H +  SKP++ RFVA +PS MKISW LMS+ L
Sbjct: 430  AKFIEL-----HSRKTKKHSDYSSKPDLLRFVAPMPSPMKISWKLMSSCL 474


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  332 bits (850), Expect = 2e-88
 Identities = 161/212 (75%), Positives = 183/212 (86%)
 Frame = -3

Query: 1034 WSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSGLEASQEAVT 855
            W+ AC+ATYQ+YWALVIG PKEKEGLI APLSKVLL+DGKTERV+LA  SGLEASQEA+T
Sbjct: 259  WNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALT 318

Query: 854  EYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHRKWKQMPRID 675
            EYRVLGP INGCSWIEL+P TSRKHQLRVHCAEALGTPIVGD+KYGW VH++WKQMPR+D
Sbjct: 319  EYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVD 378

Query: 674  LEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYHNGKHETSRP 495
            +EP S +PY++RRP GLDVQKGSVLSKVPLLHLH RE VLPN+ KFL    N K E   P
Sbjct: 379  IEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIAKFLAVL-NEKSENIHP 437

Query: 494  MHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
                 +KP++ RFVAS+P+HMKISWNLMS+YL
Sbjct: 438  ALD--AKPDLLRFVASMPTHMKISWNLMSSYL 467


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  331 bits (849), Expect = 3e-88
 Identities = 161/221 (72%), Positives = 187/221 (84%)
 Frame = -3

Query: 1061 RSFTFVF*DWSAACEATYQKYWALVIGCPKEKEGLICAPLSKVLLDDGKTERVILAHGSG 882
            R+  F    W  AC ATYQKYWALVIGCP+E+EG+I APLSKVLLDDGKTERVILA+ + 
Sbjct: 254  RNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVILANKAS 313

Query: 881  LEASQEAVTEYRVLGPMINGCSWIELQPYTSRKHQLRVHCAEALGTPIVGDFKYGWFVHR 702
            +EASQEA+TEYRVLGP INGCSWIEL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVHR
Sbjct: 314  IEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHR 373

Query: 701  KWKQMPRIDLEPNSREPYRMRRPEGLDVQKGSVLSKVPLLHLHFREIVLPNVEKFLEYYH 522
            +WKQMPR+D+EP S  PY++RRPEGLDVQKGSVLSKVPLLHLH RE+VLPN+ KFL  ++
Sbjct: 374  RWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFY 433

Query: 521  NGKHETSRPMHKEVSKPNVFRFVASLPSHMKISWNLMSAYL 399
             GK   +RP+    S  ++ RFVA +PSHM+ISWNLMS+YL
Sbjct: 434  -GK-GPNRPVSSFDS--DLLRFVARMPSHMRISWNLMSSYL 470