BLASTX nr result
ID: Catharanthus23_contig00026551
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00026551
(243 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ08482.1| hypothetical protein PRUPE_ppa016807m1g, partial ... 115 6e-24
gb|EXB28972.1| hypothetical protein L484_018388 [Morus notabilis] 114 1e-23
gb|EOY32495.1| Tetratricopeptide repeat-like superfamily protein... 109 3e-22
ref|XP_004296342.1| PREDICTED: pentatricopeptide repeat-containi... 109 4e-22
ref|XP_004243878.1| PREDICTED: putative pentatricopeptide repeat... 108 1e-21
ref|XP_006357663.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
gb|ESW05019.1| hypothetical protein PHAVU_011G144900g [Phaseolus... 98 1e-18
ref|XP_002299253.1| hypothetical protein POPTR_0001s05260g [Popu... 97 2e-18
ref|XP_006494280.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_006494279.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_006445957.1| hypothetical protein CICLE_v10017967mg, part... 95 1e-17
gb|EMJ09703.1| hypothetical protein PRUPE_ppa026555mg [Prunus pe... 83 4e-14
gb|EXC67349.1| hypothetical protein L484_000145 [Morus notabilis] 82 6e-14
gb|EXB23273.1| hypothetical protein L484_001970 [Morus notabilis] 82 6e-14
ref|XP_004235394.1| PREDICTED: putative pentatricopeptide repeat... 80 4e-13
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat... 80 4e-13
ref|XP_006353946.1| PREDICTED: putative pentatricopeptide repeat... 79 6e-13
gb|AAU90328.2| Pentatricopeptide repeat domain containing protei... 79 6e-13
>gb|EMJ08482.1| hypothetical protein PRUPE_ppa016807m1g, partial [Prunus persica]
Length = 125
Score = 115 bits (288), Expect = 6e-24
Identities = 57/84 (67%), Positives = 69/84 (82%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
+IFR M +G+E +KEHYA VVDLLCRSG+M EAY +V+EMP EVTES+VGAFFNGCKV
Sbjct: 10 KIFRSMKGSHGVEASKEHYACVVDLLCRSGKMVEAYELVREMPVEVTESIVGAFFNGCKV 69
Query: 181 HERRDLAEEMAKSI---ELKKPAG 243
H RRDLA+ MA++I ELK+P G
Sbjct: 70 HGRRDLAKMMAEAILKMELKRPGG 93
>gb|EXB28972.1| hypothetical protein L484_018388 [Morus notabilis]
Length = 529
Score = 114 bits (286), Expect = 1e-23
Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIFR M + YG+E NKEHYA +VDLLCRSG+MEEAY++V+ MP +TES+VGAFFNGCKV
Sbjct: 404 EIFRSMKEGYGVEANKEHYACLVDLLCRSGKMEEAYQVVKGMPVGITESIVGAFFNGCKV 463
Query: 181 HERRDLAEEMAKSI---ELKKPAG 243
H R DLA+ MA+ I ELK+P G
Sbjct: 464 HGRMDLAKVMAEEILRMELKRPGG 487
>gb|EOY32495.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 529
Score = 109 bits (273), Expect = 3e-22
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
+IFR M Q YGIE KEHYA VVD+LCRSGR+ EAY +V+EMP VT+S++GAFFNGCK+
Sbjct: 408 KIFRSMKQSYGIEGAKEHYACVVDMLCRSGRIVEAYELVKEMPCGVTDSILGAFFNGCKI 467
Query: 181 HERRDLAEEMAKSI---ELKKPAG 243
H R+DLA+ M + I ELKKP G
Sbjct: 468 HGRKDLAKLMGEQILKMELKKPGG 491
>ref|XP_004296342.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Fragaria vesca subsp. vesca]
Length = 528
Score = 109 bits (272), Expect = 4e-22
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIFR M + +GI KEHY VVDLLCRSG+M EAY V+ +P VTESM+GAFFNGCKV
Sbjct: 406 EIFRSMKESHGIVVCKEHYGCVVDLLCRSGKMVEAYEFVKSIPINVTESMIGAFFNGCKV 465
Query: 181 HERRDLAEEMAKSI---ELKKPAG 243
HERRDLA+ MA I ELK+P G
Sbjct: 466 HERRDLAKLMADDILKMELKRPGG 489
>ref|XP_004243878.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Solanum lycopersicum]
Length = 484
Score = 108 bits (269), Expect = 1e-21
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
+IF M + YGI KEHYA V+DLLCR GR+EEAY +V++M EVT+S+VGAFF+GCKV
Sbjct: 363 KIFWSMEESYGIRARKEHYACVIDLLCRVGRLEEAYNIVKDMAIEVTDSIVGAFFSGCKV 422
Query: 181 HERRDLAEEMAKSI---ELKKPAG 243
+ RRDLAE+MAK I +LKKP G
Sbjct: 423 YARRDLAEKMAKDILQMDLKKPEG 446
>ref|XP_006357663.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like isoform X1 [Solanum tuberosum]
gi|565382687|ref|XP_006357664.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g59600-like isoform X2 [Solanum tuberosum]
Length = 529
Score = 107 bits (266), Expect = 2e-21
Identities = 52/84 (61%), Positives = 66/84 (78%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
+IF M + YGI KEHYA V+DLLCR GR+EEAY +V++M EVT+S++GAFF+GCKV
Sbjct: 408 KIFWSMEESYGIRARKEHYACVIDLLCRVGRLEEAYDIVKDMAIEVTDSIIGAFFSGCKV 467
Query: 181 HERRDLAEEMAKSI---ELKKPAG 243
+ RRDLAE+MAK I +LKKP G
Sbjct: 468 YARRDLAEKMAKDILQMDLKKPEG 491
>ref|XP_006574778.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 604
Score = 103 bits (256), Expect = 3e-20
Identities = 50/81 (61%), Positives = 58/81 (71%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIF M QCYGIE + +HYA VVD+LCRSGR EEAY + +P +VTESM GAF +GCKV
Sbjct: 406 EIFSSMKQCYGIEASMQHYACVVDILCRSGRTEEAYEFFKGLPIQVTESMAGAFLHGCKV 465
Query: 181 HERRDLAEEMAKSIELKKPAG 243
H RRDLA+ MA I K G
Sbjct: 466 HGRRDLAKMMADEIMRMKLKG 486
>ref|XP_004485929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cicer arietinum]
Length = 548
Score = 99.0 bits (245), Expect = 6e-19
Identities = 42/74 (56%), Positives = 59/74 (79%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIF M +C+G++ +K+HYA VVDL CRSG++ EAY ++ MP ++TESM GAF NGCK+
Sbjct: 406 EIFTSMKECHGVDVSKKHYACVVDLFCRSGKIVEAYEFLKAMPIQITESMSGAFLNGCKI 465
Query: 181 HERRDLAEEMAKSI 222
H R+DLA++MA+ I
Sbjct: 466 HGRKDLAKKMAEEI 479
>gb|ESW05019.1| hypothetical protein PHAVU_011G144900g [Phaseolus vulgaris]
Length = 555
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIF M +CYGIE + +HYA VVDLLCRSGR EAY + + +VTESM GAF +GCKV
Sbjct: 409 EIFSSMNECYGIEVSMKHYACVVDLLCRSGRTVEAYDFFKALSIQVTESMAGAFLHGCKV 468
Query: 181 HERRDLAEEMAKSIELKKPAG 243
H RRDLA+ MA+ I+ K G
Sbjct: 469 HGRRDLAKMMAEEIKRMKLKG 489
>ref|XP_002299253.1| hypothetical protein POPTR_0001s05260g [Populus trichocarpa]
gi|222846511|gb|EEE84058.1| hypothetical protein
POPTR_0001s05260g [Populus trichocarpa]
Length = 599
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIF M + Y ++ KEHYA VVD+L RSGR+ +AY +V+EMP EVT+S+ GAFFNGC +
Sbjct: 420 EIFWSMKERYMVDRKKEHYACVVDMLSRSGRLVDAYELVKEMPIEVTKSIAGAFFNGCMI 479
Query: 181 HERRDLAEEMAKSI---ELKKP 237
H RRDLAE+M + +LKKP
Sbjct: 480 HGRRDLAEKMIDDVTRGDLKKP 501
>ref|XP_006494280.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like isoform X2 [Citrus sinensis]
Length = 549
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIFR M + YG++ +KEHYA VVD+LCRSGRM EAY +++++P VT SM GAF NGC +
Sbjct: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
Query: 181 HERRDLAEEMAK---SIELKKPAG 243
H RRDLA M + + L+KP G
Sbjct: 466 HGRRDLAVTMGEEFFEMGLRKPDG 489
>ref|XP_006494279.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like isoform X1 [Citrus sinensis]
Length = 576
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIFR M + YG++ +KEHYA VVD+LCRSGRM EAY +++++P VT SM GAF NGC +
Sbjct: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFRNGCNI 465
Query: 181 HERRDLAEEMAK---SIELKKPAG 243
H RRDLA M + + L+KP G
Sbjct: 466 HGRRDLAVTMGEEFFEMGLRKPDG 489
>ref|XP_006445957.1| hypothetical protein CICLE_v10017967mg, partial [Citrus clementina]
gi|557548568|gb|ESR59197.1| hypothetical protein
CICLE_v10017967mg, partial [Citrus clementina]
Length = 544
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
EIFR M + YG++ +KEHYA VVD+LCRSGRM EAY +++++P VT SM GAF NGC +
Sbjct: 406 EIFRSMKERYGVKISKEHYACVVDMLCRSGRMVEAYDLLRQVPMYVTNSMAGAFLNGCNI 465
Query: 181 HERRDLAEEMAK---SIELKKPAG 243
H RRDLA M + ++L+K G
Sbjct: 466 HGRRDLAVTMGEEFFEMDLRKLDG 489
>gb|EMJ09703.1| hypothetical protein PRUPE_ppa026555mg [Prunus persica]
Length = 565
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/79 (46%), Positives = 53/79 (67%)
Frame = +1
Query: 7 FRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKVHE 186
F M YGIEP +EHY +VDLL R+GR EEA R+++EMP + ++ GA NGC++HE
Sbjct: 439 FASMVNIYGIEPTEEHYCCMVDLLSRAGRFEEAVRLLEEMPLQPNVAVWGALLNGCEIHE 498
Query: 187 RRDLAEEMAKSIELKKPAG 243
DLA+++ + I +P G
Sbjct: 499 NVDLADQVRRRITEMEPHG 517
>gb|EXC67349.1| hypothetical protein L484_000145 [Morus notabilis]
Length = 368
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +1
Query: 7 FRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKVHE 186
F M + YGI PN+ HY +VDLL R+GR EEA R+V+EMPFE ++ GA NGC++HE
Sbjct: 243 FNEMREVYGIAPNQYHYGCMVDLLSRAGRFEEAMRLVEEMPFEPNITIWGAVLNGCEIHE 302
Query: 187 RRDLAEEMAKSIELKKPAG 243
DLA+ + I +P G
Sbjct: 303 NVDLADRIRTHITELEPQG 321
>gb|EXB23273.1| hypothetical protein L484_001970 [Morus notabilis]
Length = 564
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +1
Query: 7 FRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKVHE 186
F M + YGI PN+ HY +VDLL R+GR EEA R+V+EMPFE ++ GA NGC++HE
Sbjct: 439 FNEMREVYGIAPNQYHYGCMVDLLSRAGRFEEAMRLVEEMPFEPNITIWGAVLNGCEIHE 498
Query: 187 RRDLAEEMAKSIELKKPAG 243
DLA+ + I +P G
Sbjct: 499 NVDLADRIRTHITELEPQG 517
>ref|XP_004235394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Solanum lycopersicum]
Length = 819
Score = 79.7 bits (195), Expect = 4e-13
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +1
Query: 7 FRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKVHE 186
F MTQ Y ++P ++HYA+++D+LCRSGR EA ++ EMPFE E M + N C++H+
Sbjct: 570 FNSMTQVYNLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHK 629
Query: 187 RRDLAEEMAKSI 222
+DLA++ A +
Sbjct: 630 NQDLAKKAADQL 641
>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +1
Query: 1 EIFRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKV 180
+ F MTQ Y +EP +EHYAS+VD+LCRSGR +EA +++ MPFE E M + N C++
Sbjct: 564 QYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRI 623
Query: 181 HERRDLAEEMAKSI 222
H+ ++LA + A +
Sbjct: 624 HKNQELAIKAADQL 637
>ref|XP_006353946.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Solanum tuberosum]
Length = 819
Score = 79.0 bits (193), Expect = 6e-13
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +1
Query: 7 FRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKVHE 186
F MTQ Y ++P ++HYA+++D+LCRSGR EA ++ EMPFE E M + N C++H+
Sbjct: 570 FNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHK 629
Query: 187 RRDLAEEMAKSI 222
+DLA++ A +
Sbjct: 630 NQDLAKKAADQL 641
>gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 79.0 bits (193), Expect = 6e-13
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +1
Query: 7 FRFMTQCYGIEPNKEHYASVVDLLCRSGRMEEAYRMVQEMPFEVTESMVGAFFNGCKVHE 186
F MTQ Y ++P ++HYA+++D+LCRSGR EA ++ EMPFE E M + N C++H+
Sbjct: 570 FNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHK 629
Query: 187 RRDLAEEMAKSI 222
+DLA++ A +
Sbjct: 630 NQDLAKKAADQL 641