BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026501
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY21924.1| Pentatricopeptide repeat-containing protein, puta...    73   4e-11
ref|XP_006354771.1| PREDICTED: pentatricopeptide repeat-containi...    71   2e-10
ref|XP_004242174.1| PREDICTED: pentatricopeptide repeat-containi...    69   6e-10
ref|XP_006440635.1| hypothetical protein CICLE_v10024595mg [Citr...    68   1e-09
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]    67   2e-09
ref|XP_004301139.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
emb|CBI15198.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002514728.1| pentatricopeptide repeat-containing protein,...    59   7e-07
ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06

>gb|EOY21924.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 676

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = +1

Query: 250 LNSKTQEEALEIFHS--ATINPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFR 423
           LNS+T  +AL +F+S    INP KNL+ +SAIIH LT AK Y  ARCLIK LI+ LQ   
Sbjct: 41  LNSQTPHQALNLFNSNIKLINPSKNLEPYSAIIHVLTGAKLYTDARCLIKYLIKTLQSSL 100

Query: 424 KPRRAC 441
           KPRRAC
Sbjct: 101 KPRRAC 106


>ref|XP_006354771.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Solanum tuberosum]
          Length = 675

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
 Frame = +1

Query: 250 LNSKTQEEALEIFHSATI--NPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFR 423
           LN+KT  EA+ +F+S  +  +P K+L +HSAIIH LT A+ Y+ ARCLIK LIE L+K  
Sbjct: 44  LNAKTCSEAMRLFNSTILRTDPTKDLTLHSAIIHYLTRARLYLDARCLIKRLIENLRKNS 103

Query: 424 KPRRACS 444
            PR+ CS
Sbjct: 104 NPRKVCS 110


>ref|XP_004242174.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Solanum lycopersicum]
          Length = 691

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = +1

Query: 250 LNSKTQEEALEIFHSATI--NPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFR 423
           LN+K   EA+ ++ SA +  +P K+L +HSAIIH LT A+ Y+ ARCLIK LIE L+K  
Sbjct: 44  LNAKNCSEAMRLYDSAIVKTDPTKDLTLHSAIIHYLTRARLYLDARCLIKRLIENLRKNS 103

Query: 424 KPRRACS 444
            PR+ CS
Sbjct: 104 NPRKVCS 110


>ref|XP_006440635.1| hypothetical protein CICLE_v10024595mg [Citrus clementina]
           gi|557542897|gb|ESR53875.1| hypothetical protein
           CICLE_v10024595mg [Citrus clementina]
          Length = 697

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 47/129 (36%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
 Frame = +1

Query: 121 MLKIFPPKSKSVL------------------SKRAPIHPHRFLQFXXXXXXXXXXXXXXX 246
           MLKIFPPK K                     S   P  P   L                 
Sbjct: 1   MLKIFPPKQKLTFIDIKINKQPLITLRSISESSSMPSTPFSSLSSSSSSSLPPRSNLTNA 60

Query: 247 XLNSKTQEEALEIFHSAT--INPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKF 420
            LNSKT  +AL +F+S++  +NP K+L   +AI + L  AK Y +ARCLIKD+ E L K 
Sbjct: 61  ILNSKTPNQALVLFNSSSKKLNPTKSLAPFAAIFYVLANAKLYKNARCLIKDVTENLLKS 120

Query: 421 RKPRRACSS 447
           RKP   C S
Sbjct: 121 RKPHHVCYS 129


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
 Frame = +1

Query: 121 MLKIFPPKSKSVLSKRAPIHPHRFLQF-XXXXXXXXXXXXXXXXLNSKTQEEALEIFHSA 297
           MLK FPPKS+ + +K +                           L  +T  +ALE+FHS 
Sbjct: 1   MLKSFPPKSRRIYAKHSSFISRPLSSSPSSSSSDSSPSSLPNSILTCRTANQALELFHSV 60

Query: 298 T--INPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFRKPRRACS 444
           +   +  KN +++SAIIH LT AK Y  ARCL++DLI+ LQK R+ R  CS
Sbjct: 61  SRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCS 111


>ref|XP_004301139.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Fragaria vesca subsp. vesca]
          Length = 631

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = +1

Query: 250 LNSKTQEEALEIFHSAT--INPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFR 423
           LN ++  EALEIF+SAT  +   K+ +++SAI H L  AK Y+ AR LIK+LI++LQK  
Sbjct: 27  LNCRSPAEALEIFNSATKQVGARKDFQLYSAITHVLVSAKLYVKARLLIKELIQDLQKSC 86

Query: 424 KPRRAC 441
           K RRAC
Sbjct: 87  KSRRAC 92


>ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = +1

Query: 121 MLKIFPPKSKSVLSKRAPIHPHRFLQF-XXXXXXXXXXXXXXXXLNSKTQEEALEIFHSA 297
           MLK FPPKS+ + +K +                           L  +T  +ALE+FHS 
Sbjct: 1   MLKSFPPKSRRIYAKHSSFISRPLSSSPSSSSSDSSPSSLPNSILTCRTANQALELFHSV 60

Query: 298 T--INPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFRKPRRACS 444
           +   +  KN +++SAIIH LT AK Y  ARCL++DLI+ LQ  R+ R  CS
Sbjct: 61  SRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111


>emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = +1

Query: 121 MLKIFPPKSKSVLSKRAPIHPHRFLQF-XXXXXXXXXXXXXXXXLNSKTQEEALEIFHSA 297
           MLK FPPKS+ + +K +                           L  +T  +ALE+FHS 
Sbjct: 1   MLKSFPPKSRRIYAKHSSFISRPLSSSPSSSSSDSSPSSLPNSILTCRTANQALELFHSV 60

Query: 298 T--INPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFRKPRRACS 444
           +   +  KN +++SAIIH LT AK Y  ARCL++DLI+ LQ  R+ R  CS
Sbjct: 61  SRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111


>ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546332|gb|EEF47834.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
 Frame = +1

Query: 121 MLKIFPPKSKSVLSKRAPIHPHRFLQFXXXXXXXXXXXXXXXXLNSKTQEEALEIFHSAT 300
           MLK+FPPK    L +          +                 L+SKT E+AL+ F S  
Sbjct: 1   MLKLFPPKHSLKLVET---------KIRFFTSLSPPSDLTTIILHSKTPEQALDTFTSVL 51

Query: 301 I----NPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFRKPRRACS 444
                NP K L ++SA+IH LT AK Y  ARCL KDLI+ L +   PRR  S
Sbjct: 52  KQNPNNPTKKLHLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNS 103


>ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = +1

Query: 250 LNSKTQEEALEIFHSATINPHKNLKVHSAIIHCLTEAKSYIHARCLIKDLIEELQKFRKP 429
           LN ++  +ALE F++A   P KN++++SAIIH L  +K   HAR L+ DL++ L K  KP
Sbjct: 38  LNCRSPWKALEFFNAA---PEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKP 94

Query: 430 RRAC 441
             AC
Sbjct: 95  YHAC 98