BLASTX nr result

ID: Catharanthus23_contig00026375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026375
         (296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357352.1| PREDICTED: crossover junction endonuclease E...    62   6e-08
ref|XP_004237479.1| PREDICTED: crossover junction endonuclease E...    61   2e-07

>ref|XP_006357352.1| PREDICTED: crossover junction endonuclease EME1B-like [Solanum
           tuberosum]
          Length = 631

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/90 (46%), Positives = 53/90 (58%)
 Frame = -3

Query: 291 MSQPIPVDILSDDDECGYLNTSDPSATGKEAVCIDLSTPVESYSKKKPRISEPNDLNPST 112
           MSQPI VDILSDD++ G         + K+   IDLSTP+    KKK R  + N+ NP  
Sbjct: 1   MSQPISVDILSDDEDDG--GNGGYGYSVKQNDTIDLSTPLTIPFKKKQRTEKSNNWNP-- 56

Query: 111 TMVFIIDDDPTPLKHSFGSASTASMVAETP 22
           T++ I DDD TP +    S ST S VA+TP
Sbjct: 57  TVLVIEDDDETPFR---PSKSTPSFVADTP 83


>ref|XP_004237479.1| PREDICTED: crossover junction endonuclease EME1B-like [Solanum
           lycopersicum]
          Length = 628

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/90 (45%), Positives = 53/90 (58%)
 Frame = -3

Query: 291 MSQPIPVDILSDDDECGYLNTSDPSATGKEAVCIDLSTPVESYSKKKPRISEPNDLNPST 112
           MSQPI VDILSDD++ G         +  +   IDLSTP+   SKKK R  +  + NP  
Sbjct: 1   MSQPISVDILSDDEDDG--GNGGYGFSFNQNDTIDLSTPLTIPSKKKQRTEKSTNWNP-- 56

Query: 111 TMVFIIDDDPTPLKHSFGSASTASMVAETP 22
           T++ I DDD TP++    S ST S VA+TP
Sbjct: 57  TVLVIEDDDETPVR---PSKSTPSFVADTP 83


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