BLASTX nr result

ID: Catharanthus23_contig00026328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026328
         (449 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338249.1| PREDICTED: uncharacterized protein LOC102601...    72   8e-11
ref|XP_006338248.1| PREDICTED: uncharacterized protein LOC102601...    72   8e-11
gb|EOX91261.1| Vacuolar protein sorting-associated protein 13C, ...    62   6e-08

>ref|XP_006338249.1| PREDICTED: uncharacterized protein LOC102601421 isoform X2 [Solanum
            tuberosum]
          Length = 2549

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 48/120 (40%), Positives = 67/120 (55%)
 Frame = +1

Query: 1    ILSSCGHMGICHEESFGLRLRETQKVHILESTNDVNSCQGQISLGVHLKFNGLKAFLSEL 180
            + SS G   +   +S    L++ Q + I +S + VNS Q   SL  +LK  GL   L   
Sbjct: 787  LTSSSGDTAVVDAKS----LKDLQNIDIAKS-DGVNSSQACTSLSAYLKLKGLNVSLDTG 841

Query: 181  SNRSSYEMVRISPATVQSISLRKDCHSLGSTTIAFSTALQWMVSGFNTLVILDEFLVLVE 360
             N+S  ++V ++P T++ +SLRKD HSLGS  I FS  L  M  G  T V LDEF VL++
Sbjct: 842  DNQSC-QIVVLNPLTIRLLSLRKDLHSLGSIDIFFSIVLHAMGCGLTTRVFLDEFAVLLK 900


>ref|XP_006338248.1| PREDICTED: uncharacterized protein LOC102601421 isoform X1 [Solanum
            tuberosum]
          Length = 3185

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 48/120 (40%), Positives = 67/120 (55%)
 Frame = +1

Query: 1    ILSSCGHMGICHEESFGLRLRETQKVHILESTNDVNSCQGQISLGVHLKFNGLKAFLSEL 180
            + SS G   +   +S    L++ Q + I +S + VNS Q   SL  +LK  GL   L   
Sbjct: 787  LTSSSGDTAVVDAKS----LKDLQNIDIAKS-DGVNSSQACTSLSAYLKLKGLNVSLDTG 841

Query: 181  SNRSSYEMVRISPATVQSISLRKDCHSLGSTTIAFSTALQWMVSGFNTLVILDEFLVLVE 360
             N+S  ++V ++P T++ +SLRKD HSLGS  I FS  L  M  G  T V LDEF VL++
Sbjct: 842  DNQSC-QIVVLNPLTIRLLSLRKDLHSLGSIDIFFSIVLHAMGCGLTTRVFLDEFAVLLK 900


>gb|EOX91261.1| Vacuolar protein sorting-associated protein 13C, putative [Theobroma
            cacao]
          Length = 3155

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/118 (33%), Positives = 62/118 (52%)
 Frame = +1

Query: 52   LRLRETQKVHILESTNDVNSCQGQISLGVHLKFNGLKAFLSELSNRSSYEMVRISPATVQ 231
            LRL+E + + I +  N   + +   SL  +L+ NGL+A+  ++  +   ++  + P T Q
Sbjct: 792  LRLQELKILDIPKLENTKYASKDGNSLRFYLRLNGLQAYFEDMVEKQKNQIFVLDPLTFQ 851

Query: 232  SISLRKDCHSLGSTTIAFSTALQWMVSGFNTLVILDEFLVLVECQV*ILLYHVLSHTF 405
              S R+  HS  +T+IAFSTA   +  GF  L+  DE    +  QV   L+  LSH F
Sbjct: 852  FSSFRECVHSFSATSIAFSTAFYGLAMGFTILLFFDELYARI--QVLTGLFSDLSHPF 907


Top