BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00026257
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citr...    74   3e-11
ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containi...    71   2e-10
ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containi...    69   8e-10
gb|EOY20099.1| Pentatricopeptide repeat (PPR) superfamily protei...    69   8e-10
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_002316152.1| pentatricopeptide repeat-containing family p...    65   1e-08
ref|XP_003555011.2| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
gb|ESW23563.1| hypothetical protein PHAVU_004G057900g [Phaseolus...    59   5e-07
ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
gb|EXB51258.1| hypothetical protein L484_019251 [Morus notabilis]      58   1e-06
ref|XP_004504664.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar...    56   4e-06
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...    56   6e-06
ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutr...    55   1e-05

>ref|XP_006422261.1| hypothetical protein CICLE_v10004323mg [Citrus clementina]
           gi|568881878|ref|XP_006493776.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Citrus sinensis]
           gi|557524134|gb|ESR35501.1| hypothetical protein
           CICLE_v10004323mg [Citrus clementina]
          Length = 827

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPS-LSKTLVSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSH 383
           L  +P  +H   A   ++ +  S SLF+W KRQSWY P DE Y+ LF D+LNESRD D  
Sbjct: 158 LQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLF-DVLNESRDFDGM 216

Query: 384 SLMIRFVI---GENSLSYFSPYNRVIQYLA 464
             +   ++    +N +S FS YNRVIQYLA
Sbjct: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQYLA 246


>ref|XP_004245808.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Solanum lycopersicum]
          Length = 794

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSLSKTL-VSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSH 383
           L  IP   H + A  + +    S SLF+W KRQ WY PND  YITLF D LN+SRD D  
Sbjct: 123 LQFIPNMTHIMQALKVMEDSDASLSLFRWAKRQPWYKPNDACYITLF-DKLNQSRDFDGI 181

Query: 384 SLMIRFVI---GEN-SLSYFSPYNRVIQYLA 464
            L+   ++   GEN + S F+ YNRVIQYLA
Sbjct: 182 QLVFDDMVLDSGENGASSLFNAYNRVIQYLA 212


>ref|XP_006359236.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Solanum tuberosum]
          Length = 794

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSLSKTL-VSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSH 383
           L  IP   H + A  + +    S SLF+W KRQ WY PND  YITLF D LN+SRD D  
Sbjct: 123 LQFIPNMTHIMQALKVMEDSDASLSLFRWAKRQPWYKPNDACYITLF-DKLNQSRDFDGI 181

Query: 384 SLMIRFVI---GEN-SLSYFSPYNRVIQYLA 464
             +   ++   GEN + S F+ YNRVIQYLA
Sbjct: 182 QSVFDDMVLDSGENGASSLFNAYNRVIQYLA 212


>gb|EOY20099.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 820

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSLSKTL-VSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSH 383
           L  +P  +H   A  + K    S SLF+W KRQSWY P+DE Y  LF D LN+SRD D+ 
Sbjct: 150 LQFMPKMIHVTQAMKVVKDSDASLSLFRWAKRQSWYVPSDECYDILF-DGLNQSRDFDAI 208

Query: 384 SLMIRFVIGE---NSLSYFSPYNRVIQYLA 464
             +   ++ E   N +S F+ YNRVIQYLA
Sbjct: 209 QSLFEEMVQESSDNGVSLFTAYNRVIQYLA 238


>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
           gi|449490234|ref|XP_004158545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/68 (57%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = +3

Query: 270 STSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSHSLMIRFVIGENSLS---YFSPY 440
           S SLF+W KRQSWYSPNDE Y  LF D LN+ RD D+  L+   V+ + S      FS Y
Sbjct: 175 SLSLFRWAKRQSWYSPNDECYGLLF-DGLNQRRDFDAIQLLFDEVVRDLSSDETVSFSAY 233

Query: 441 NRVIQYLA 464
           NRVIQYLA
Sbjct: 234 NRVIQYLA 241


>ref|XP_002316152.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865192|gb|EEF02323.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 785

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSL-SKTLVSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDS- 380
           L  +P   H + A  + +++    SLF+W KRQ+WY PNDE Y+ LF D LN+SRD D  
Sbjct: 116 LQFVPNMTHVVQALKIINESDALLSLFKWAKRQTWYVPNDECYVMLF-DGLNQSRDFDGI 174

Query: 381 HSLMIRFVIGE-NSLSYFSPYNRVIQYLA 464
            SL    V     S + FS YNRV++YLA
Sbjct: 175 QSLFDEMVCDSIKSATQFSAYNRVLKYLA 203


>ref|XP_003555011.2| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Glycine max]
          Length = 818

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = +3

Query: 276 SLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSHSLMIRFVIGENS--LSYFSPYNRV 449
           SLF+W KRQ+WY P+D+ Y+ LF D LN+ RD +   L+   ++G+++  +S F+  NRV
Sbjct: 173 SLFRWAKRQAWYVPSDDCYVMLF-DGLNQKRDFEGIQLLFDEMVGDSADGVSLFAACNRV 231

Query: 450 IQYLA 464
           I+YLA
Sbjct: 232 IRYLA 236


>gb|ESW23563.1| hypothetical protein PHAVU_004G057900g [Phaseolus vulgaris]
          Length = 755

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = +3

Query: 276 SLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSHSLMIRFVIGENS--LSYFSPYNRV 449
           SLF+W KRQ+WY+ +D+ Y+ LF D LN+ RD +   L+   ++G+++  +S F+  NRV
Sbjct: 110 SLFRWAKRQAWYATSDDCYVMLF-DALNQKRDFEGIQLLFDEMVGDSADGVSLFAACNRV 168

Query: 450 IQYLA 464
           I+YLA
Sbjct: 169 IRYLA 173


>ref|XP_004306550.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 844

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSLSKTLVST-SLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDS- 380
           L  +P  +H   A  + K      SLF+W KRQ WY P+DE Y+ LF D LNESRD D  
Sbjct: 174 LQFVPNMIHITQALKVVKDGEGALSLFRWAKRQPWYLPSDECYVLLF-DGLNESRDFDGI 232

Query: 381 HSLMIRFV--IGENSLSYFSPYNRVIQYLA 464
            SL    V     N +   + YNRVIQ+LA
Sbjct: 233 QSLFDEMVQDSSNNGVLSSTAYNRVIQFLA 262


>gb|EXB51258.1| hypothetical protein L484_019251 [Morus notabilis]
          Length = 834

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = +3

Query: 276 SLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSHSLMIRFVIGENSLS---YFSPYNR 446
           SLF+W KRQ WY P+DE + TLF D LN+S++ D   L+   ++ ++S +    F   NR
Sbjct: 188 SLFRWSKRQQWYLPSDECFTTLF-DSLNQSKNFDEIQLLFEEMVRDSSSNGSLSFGACNR 246

Query: 447 VIQYLA 464
           VIQYLA
Sbjct: 247 VIQYLA 252


>ref|XP_004504664.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cicer arietinum]
          Length = 824

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
 Frame = +3

Query: 276 SLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSHSLMIRFVIGENS---LSYFSPYNR 446
           SLF+W KRQSWYSP+D+ Y+ LF D LN+ +D D    +   ++G++S   +S     NR
Sbjct: 178 SLFRWAKRQSWYSPSDDCYVMLF-DGLNQRKDFDGIQSLFDEMVGDSSNSGVSLVVSCNR 236

Query: 447 VIQYLA 464
           VI+YLA
Sbjct: 237 VIRYLA 242


>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
           DEFECTIVE 2217; Flags: Precursor
           gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
           thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSLSKTL-VSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSH 383
           L  +P  +H   +  + K +  + SLF+W K+Q WY P+DE Y+ LF D LN+ RD    
Sbjct: 166 LQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLF-DGLNQGRDFVGI 224

Query: 384 SLMIRFVIGENSLS---YFSPYNRVIQYLA 464
             +   ++ ++S      F+ YN+VIQYLA
Sbjct: 225 QSLFEEMVQDSSSHGDLSFNAYNQVIQYLA 254


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
           gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 832

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSLSKTL-VSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRDNDSH 383
           L  +P  +H   +  + K +  + SLF+W K+Q WY P+DE Y+ LF D LN+ RD    
Sbjct: 162 LQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLF-DGLNQGRDFVGI 220

Query: 384 SLMIRFVIGENSLS---YFSPYNRVIQYLA 464
             +   ++ ++S      F  YN+VIQYLA
Sbjct: 221 QSLFEEMVQDSSSHGDLSFGAYNQVIQYLA 250


>ref|XP_006389884.1| hypothetical protein EUTSA_v10018121mg [Eutrema salsugineum]
           gi|557086318|gb|ESQ27170.1| hypothetical protein
           EUTSA_v10018121mg [Eutrema salsugineum]
          Length = 836

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
 Frame = +3

Query: 207 LLIIPYDMHFISAPSLSKTL-VSTSLFQWEKRQSWYSPNDEFYITLFLDILNESRD---- 371
           L  +P  +H   +  + + +  + SLF+W K+Q WY P+DE Y+ LF D LN+ RD    
Sbjct: 166 LQFVPNMVHITQSLKIVQDVDAALSLFRWAKKQPWYLPSDECYVVLF-DGLNQGRDFVGI 224

Query: 372 NDSHSLMIRFVIGENSLSYFSPYNRVIQYLA 464
                 M++   G   LS  S YN+VIQYLA
Sbjct: 225 QTLFEEMVQDSSGHGGLS-LSAYNQVIQYLA 254