BLASTX nr result
ID: Catharanthus23_contig00026173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00026173
(478 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006466342.1| PREDICTED: uncharacterized protein LOC102619... 87 2e-15
ref|XP_006466341.1| PREDICTED: uncharacterized protein LOC102619... 87 2e-15
ref|XP_006426245.1| hypothetical protein CICLE_v10025907mg [Citr... 87 3e-15
ref|XP_002532383.1| RNA binding protein, putative [Ricinus commu... 84 1e-14
gb|EMJ06681.1| hypothetical protein PRUPE_ppa008148mg [Prunus pe... 83 3e-14
ref|XP_006411825.1| hypothetical protein EUTSA_v10025567mg [Eutr... 82 7e-14
gb|EXC31698.1| hypothetical protein L484_008788 [Morus notabilis] 82 1e-13
ref|XP_003635600.1| PREDICTED: uncharacterized tRNA/rRNA methylt... 80 2e-13
ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methylt... 80 2e-13
emb|CBI40848.3| unnamed protein product [Vitis vinifera] 80 2e-13
ref|XP_004289516.1| PREDICTED: uncharacterized tRNA/rRNA methylt... 80 3e-13
ref|XP_006284007.1| hypothetical protein CARUB_v10005129mg [Caps... 78 1e-12
ref|XP_004250164.1| PREDICTED: uncharacterized tRNA/rRNA methylt... 78 1e-12
ref|XP_002868951.1| tRNA/rRNA methyltransferase family protein [... 77 2e-12
ref|NP_195515.2| tRNA/rRNA methyltransferase (SpoU) family prote... 77 3e-12
gb|EOX91900.1| TRNA/rRNA methyltransferase family protein [Theob... 76 5e-12
ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methylt... 76 5e-12
emb|CAB37542.1| hypothetical protein [Arabidopsis thaliana] gi|7... 76 5e-12
gb|AFK37647.1| unknown [Lotus japonicus] 75 7e-12
ref|XP_006584568.1| PREDICTED: uncharacterized protein LOC100792... 73 3e-11
>ref|XP_006466342.1| PREDICTED: uncharacterized protein LOC102619635 isoform X2 [Citrus
sinensis]
Length = 367
Score = 87.0 bits (214), Expect = 2e-15
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = +1
Query: 25 SNRGRQTKMQCT-SSFLPATSPFIPNKERT-SKPNSLNFQPRNKILCFSQTYDSASDEDD 198
S ++ +MQ T ++++P T P +P SKP+S Q I + Y + +D +
Sbjct: 5 SRERKRRRMQYTYTAWVPTTYPPLPKIVTVKSKPSSAKTQ--TPIRYSAHEYINYNDNIN 62
Query: 199 DNNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTE 378
N+ + LP+H+ +ITSTSNPFVKHC+KLR SS+YR SHGS L+VG+TPIR +
Sbjct: 63 INDDADDGRKFALPYHVKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYN 122
Query: 379 F 381
F
Sbjct: 123 F 123
>ref|XP_006466341.1| PREDICTED: uncharacterized protein LOC102619635 isoform X1 [Citrus
sinensis]
Length = 372
Score = 87.0 bits (214), Expect = 2e-15
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = +1
Query: 25 SNRGRQTKMQCT-SSFLPATSPFIPNKERT-SKPNSLNFQPRNKILCFSQTYDSASDEDD 198
S ++ +MQ T ++++P T P +P SKP+S Q I + Y + +D +
Sbjct: 5 SRERKRRRMQYTYTAWVPTTYPPLPKIVTVKSKPSSAKTQ--TPIRYSAHEYINYNDNIN 62
Query: 199 DNNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTE 378
N+ + LP+H+ +ITSTSNPFVKHC+KLR SS+YR SHGS L+VG+TPIR +
Sbjct: 63 INDDADDGRKFALPYHVKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYN 122
Query: 379 F 381
F
Sbjct: 123 F 123
>ref|XP_006426245.1| hypothetical protein CICLE_v10025907mg [Citrus clementina]
gi|557528235|gb|ESR39485.1| hypothetical protein
CICLE_v10025907mg [Citrus clementina]
Length = 367
Score = 86.7 bits (213), Expect = 3e-15
Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Frame = +1
Query: 25 SNRGRQTKMQCT-SSFLPATSPFIPNKERTSKPNSLNFQPRNKILCFSQTYDSASDEDDD 201
S ++ +MQ T ++ PAT P +P K T K + + + I + Y + +D +
Sbjct: 5 SRERKRRRMQYTYTAGAPATYPPLP-KIVTVKSKLSSAKTQIPIRYSAHEYSNNNDNINI 63
Query: 202 NNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
N+ + + LP+H+ +ITSTSNPFVKHC+KLR SS+YR SHGS L+VG+TPIR + F
Sbjct: 64 NDDEDDGRKFALPYHVKNITSTSNPFVKHCLKLRQSSSYRHSHGSALVVGTTPIREIYNF 123
>ref|XP_002532383.1| RNA binding protein, putative [Ricinus communis]
gi|223527907|gb|EEF29995.1| RNA binding protein,
putative [Ricinus communis]
Length = 342
Score = 84.3 bits (207), Expect = 1e-14
Identities = 52/112 (46%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 49 MQCT-SSFLPATSPFIPNKERTSKPNSLNFQPRNKILCFSQTYDSASDEDDDNNWQSSIK 225
MQ T +S++P SP P SKP N P + + D DN S+
Sbjct: 1 MQSTYASWVPTVSPS-PLNLTNSKPRLSNTSPNQ----------TQRNGDIDN---SAEV 46
Query: 226 SLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
PLP H+ SITSTSNPF+KHCVKLR SS YR +HGS L+VG+TPIR + +F
Sbjct: 47 RFPLPTHIKSITSTSNPFIKHCVKLRQSSPYRHAHGSALVVGTTPIREICKF 98
>gb|EMJ06681.1| hypothetical protein PRUPE_ppa008148mg [Prunus persica]
Length = 343
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +1
Query: 202 NNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
+N++ LPLP H+NSITSTSNPFVKHC KLR SS+YR SHGS L+VG+TPIR + F
Sbjct: 39 SNFEDYDVKLPLPSHVNSITSTSNPFVKHCHKLRQSSSYRHSHGSALVVGATPIREIYRF 98
>ref|XP_006411825.1| hypothetical protein EUTSA_v10025567mg [Eutrema salsugineum]
gi|557112995|gb|ESQ53278.1| hypothetical protein
EUTSA_v10025567mg [Eutrema salsugineum]
Length = 355
Score = 82.0 bits (201), Expect = 7e-14
Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = +1
Query: 49 MQCTSSFL-PATSPFIPNKERTSKPN---SLNFQPRNKILCFSQTYDSASDEDDDNNWQS 216
M C +F PA SP +P + S S PR +I + + D D + +S
Sbjct: 1 MHCGCAFASPAVSPRLPFDTKISVSKLRASSAHLPRTQI-----QINPSDDLTIDGSDKS 55
Query: 217 SIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
+ LP H+NSITSTSNPF+KHC+KLR SS+YR +HGSVL+VG PIR + F
Sbjct: 56 PATRVSLPSHVNSITSTSNPFIKHCLKLRQSSSYRHAHGSVLVVGDIPIREVCMF 110
>gb|EXC31698.1| hypothetical protein L484_008788 [Morus notabilis]
Length = 142
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/108 (40%), Positives = 68/108 (62%)
Frame = +1
Query: 49 MQCTSSFLPATSPFIPNKERTSKPNSLNFQPRNKILCFSQTYDSASDEDDDNNWQSSIKS 228
MQC ++ L T+ + R S+ ++ QP + S S + + ++S +
Sbjct: 1 MQCMNTSLVTTTYPSKLRARNSQLSTPGRQPH---------FQSNSRDKNGELFESVAAN 51
Query: 229 LPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSL 372
+ LP H+ SITSTSNPFVKHC+KLR+SS+YR +HGS L+VG+TP+R++
Sbjct: 52 ISLPSHVKSITSTSNPFVKHCLKLRHSSSYRHAHGSALVVGATPLRAI 99
>ref|XP_003635600.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase
slr1673-like, partial [Vitis vinifera]
Length = 206
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +1
Query: 172 YDSASDEDDDNNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVG 351
+ +S ++D + + +LPLP H+ SITS SNPFVKHC KLR+SS+YR SHGS L+VG
Sbjct: 19 FTQSSHHNEDTS--CPVVTLPLPSHVKSITSPSNPFVKHCFKLRHSSSYRYSHGSALVVG 76
Query: 352 STPIRSLTEF 381
+TPIR + +F
Sbjct: 77 TTPIREIYKF 86
>ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA-like
[Vitis vinifera]
Length = 459
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +1
Query: 172 YDSASDEDDDNNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVG 351
+ +S ++D + + +LPLP H+ SITS SNPFVKHC KLR+SS+YR SHGS L+VG
Sbjct: 149 FTQSSHHNEDTS--CPVVTLPLPSHVKSITSPSNPFVKHCFKLRHSSSYRYSHGSALVVG 206
Query: 352 STPIRSLTEF 381
+TPIR + +F
Sbjct: 207 TTPIREIYKF 216
>emb|CBI40848.3| unnamed protein product [Vitis vinifera]
Length = 1306
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +1
Query: 172 YDSASDEDDDNNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVG 351
+ +S ++D + + +LPLP H+ SITS SNPFVKHC KLR+SS+YR SHGS L+VG
Sbjct: 987 FTQSSHHNEDTS--CPVVTLPLPSHVKSITSPSNPFVKHCFKLRHSSSYRYSHGSALVVG 1044
Query: 352 STPIRSLTEF 381
+TPIR + +F
Sbjct: 1045 TTPIREIYKF 1054
>ref|XP_004289516.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase slr1673-like
[Fragaria vesca subsp. vesca]
Length = 332
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +1
Query: 229 LPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEFISVFVE 399
LPLP H+ I+STSNPFVKHC KLR SS+YR SHGSVL+VG+TPIR + EF +E
Sbjct: 39 LPLPSHVKFISSTSNPFVKHCHKLRQSSSYRHSHGSVLVVGATPIREICEFQKSLLE 95
>ref|XP_006284007.1| hypothetical protein CARUB_v10005129mg [Capsella rubella]
gi|482552712|gb|EOA16905.1| hypothetical protein
CARUB_v10005129mg [Capsella rubella]
Length = 356
Score = 77.8 bits (190), Expect = 1e-12
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 49 MQCTSSFLPATSPFIPNKERTSKPNSLNFQPRNKILCFSQTYDSASDEDDDNNWQSSIK- 225
M C +F A+ P P KP++ + + +Q + SD+ N+ S +
Sbjct: 3 MHCGCAF--ASQPVSPRILFEFKPSASKLRASSAQFPKTQIRINPSDDILINSLDKSPEI 60
Query: 226 SLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
+ LP H+NSITSTSNPFVKHC+KLR SS+YR HGSVL+VG+ PIR + F
Sbjct: 61 RVSLPSHVNSITSTSNPFVKHCLKLRQSSSYRHVHGSVLVVGAIPIREVCIF 112
>ref|XP_004250164.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase slr1673-like
[Solanum lycopersicum]
Length = 338
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +1
Query: 136 QPRNKILCFSQTYDSASDEDDDNNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSA 315
+PR +I FS D +++ I+S LP ++NSITSTSNPFVKHC+KLR +S+
Sbjct: 20 EPRTRIQPFSSKPDFPTEK---------IESF-LPFNVNSITSTSNPFVKHCLKLRQNSS 69
Query: 316 YRCSHGSVLLVGSTPIRSLTEF 381
YR HGSVL+VGSTPIR + F
Sbjct: 70 YRHFHGSVLVVGSTPIREIYSF 91
>ref|XP_002868951.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297314787|gb|EFH45210.1| tRNA/rRNA
methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 355
Score = 77.4 bits (189), Expect = 2e-12
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 8/119 (6%)
Frame = +1
Query: 49 MQCTSSFLP-ATSPFIPN--KERTSKPNSLNFQ-PRNKILCFSQTYDSASDEDDDNNWQS 216
M C +F + SP +P K SK S + Q PR +I + DD S
Sbjct: 1 MHCGCAFASQSVSPRLPFEIKASVSKLRSSSAQLPRTQIQI---------NPSDDLLVNS 51
Query: 217 SIKS----LPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
S KS + LP H+NSITST+NPFVKHC+KLR SS+YR +HGSVL+VG+ PIR + F
Sbjct: 52 SDKSPATRVSLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGAIPIREVCMF 110
>ref|NP_195515.2| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
thaliana] gi|26450142|dbj|BAC42190.1| unknown protein
[Arabidopsis thaliana] gi|90093284|gb|ABD85155.1|
At4g38020 [Arabidopsis thaliana]
gi|332661464|gb|AEE86864.1| tRNA/rRNA methyltransferase
(SpoU) family protein [Arabidopsis thaliana]
Length = 352
Score = 76.6 bits (187), Expect = 3e-12
Identities = 47/110 (42%), Positives = 62/110 (56%)
Frame = +1
Query: 52 QCTSSFLPATSPFIPNKERTSKPNSLNFQPRNKILCFSQTYDSASDEDDDNNWQSSIKSL 231
Q SS LP +K R S PR +I + + D + +S +
Sbjct: 10 QTVSSLLPFEIKTYASKLRASSAQL----PRTQI-----QINPSDDLSIYGSDKSPANRV 60
Query: 232 PLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
LP H+NSITST+NPFVKHC+KLR SS+YR +HGSVL+VG+ PIR + F
Sbjct: 61 SLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREVCMF 110
>gb|EOX91900.1| TRNA/rRNA methyltransferase family protein [Theobroma cacao]
Length = 356
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +1
Query: 175 DSASDEDDDNNWQSSIKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGS 354
D D+ DN S + LP H+ SITSTSNPF+KHC+KL++SS+YR SH S L+VG+
Sbjct: 48 DIEGDDKIDNGGGSWLMKFTLPSHVKSITSTSNPFIKHCLKLKSSSSYRHSHASALVVGT 107
Query: 355 TPIRSLTEF 381
+P+R + +
Sbjct: 108 SPLREVYRY 116
>ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase slr1673-like
[Cucumis sativus]
Length = 328
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +1
Query: 229 LPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
+PLP H+ +ITS SNPFVKHCVKLR SS+YR HGSV++VG+TPIR + +F
Sbjct: 38 IPLPSHVKAITSISNPFVKHCVKLRFSSSYRHFHGSVVVVGATPIREICKF 88
>emb|CAB37542.1| hypothetical protein [Arabidopsis thaliana]
gi|7270785|emb|CAB80467.1| hypothetical protein
[Arabidopsis thaliana]
Length = 400
Score = 75.9 bits (185), Expect = 5e-12
Identities = 52/130 (40%), Positives = 70/130 (53%)
Frame = +1
Query: 52 QCTSSFLPATSPFIPNKERTSKPNSLNFQPRNKILCFSQTYDSASDEDDDNNWQSSIKSL 231
Q SS LP +K R S PR +I + + D + +S +
Sbjct: 10 QTVSSLLPFEIKTYASKLRASSAQL----PRTQI-----QINPSDDLSIYGSDKSPANRV 60
Query: 232 PLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEFISVFVEICL* 411
LP H+NSITST+NPFVKHC+KLR SS+YR +HGSVL+VG+ PIR ++SV +
Sbjct: 61 SLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIR----YVSVIL----- 111
Query: 412 NYFWRLFFMI 441
+ LFF I
Sbjct: 112 ---YSLFFFI 118
>gb|AFK37647.1| unknown [Lotus japonicus]
Length = 157
Score = 75.5 bits (184), Expect = 7e-12
Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Frame = +1
Query: 49 MQCTSSFLPATSPFIPNKERTSKPNSLNFQPRNKILC---FSQTYDSASDEDDDNNWQSS 219
MQC SS L + F P + K S FQPR + + T ++ + DDD
Sbjct: 1 MQCCSSTLHYATVFYPQTHKVVKARS--FQPRLSVTPPPHKTHTQETRTSHDDDKP---- 54
Query: 220 IKSLPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
ITS SNPFVKH +KLRN+S+YR SHGSVL+VG+TPIR + F
Sbjct: 55 ----------KLITSASNPFVKHYLKLRNNSSYRRSHGSVLVVGATPIREIYRF 98
>ref|XP_006584568.1| PREDICTED: uncharacterized protein LOC100792782 isoform X1 [Glycine
max]
Length = 307
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/111 (38%), Positives = 55/111 (49%)
Frame = +1
Query: 49 MQCTSSFLPATSPFIPNKERTSKPNSLNFQPRNKILCFSQTYDSASDEDDDNNWQSSIKS 228
MQC+S F P T +KI CF + ++S +
Sbjct: 1 MQCSSIFYPQT---------------------HKIWCFKPSLSVTPPPQQQQQQRTSHEE 39
Query: 229 LPLPHHLNSITSTSNPFVKHCVKLRNSSAYRCSHGSVLLVGSTPIRSLTEF 381
P P ITS SNPFVKHC+KLRNSS+YR SH S ++VG+TPIR + F
Sbjct: 40 KPKP-----ITSVSNPFVKHCLKLRNSSSYRRSHASAIVVGATPIREICRF 85