BLASTX nr result
ID: Catharanthus23_contig00026105
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00026105
(312 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 84 1e-16
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 79 4e-16
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 81 4e-16
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 81 5e-16
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 78 8e-16
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 78 8e-16
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 79 1e-15
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 82 2e-15
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 81 2e-15
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 82 2e-15
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 82 2e-15
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 78 3e-15
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 77 6e-15
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 75 8e-14
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 74 4e-13
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 74 4e-13
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 74 4e-13
emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera] 79 6e-13
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 70 1e-11
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 70 2e-11
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 83.6 bits (205), Expect(3) = 1e-16
Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF SP PG+VC LRKSLYGL Q P+C F+KL AAL GF+ SY+DYSLFTY +Q I L
Sbjct: 822 GFASPTPGKVCGLRKSLYGLQQAPKCWFAKLVAALTSYGFKQSYLDYSLFTYEAQHIQLN 881
Query: 278 V-PYMGDLIIT 307
V Y+ DLII+
Sbjct: 882 VLVYVDDLIIS 892
Score = 24.3 bits (51), Expect(3) = 1e-16
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V T L + KGWE+H M
Sbjct: 783 VQTFLAVVAMKGWELHQM 800
Score = 23.9 bits (50), Expect(3) = 1e-16
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3
Query: 57 EVYNAFLHGDLIE 95
+V+NAFLHG+L E
Sbjct: 801 DVHNAFLHGELDE 813
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 79.3 bits (194), Expect(3) = 4e-16
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ +P VCRLRKSLYGL Q P+C F+KL ALK GF SY DYSLFTYT ++ +
Sbjct: 1081 GFERSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQIN 1140
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 1141 VLVYVDDLIISG 1152
Score = 25.8 bits (55), Expect(3) = 4e-16
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 1060 DVHNAFLHGDLEEEVYMKL 1078
Score = 24.6 bits (52), Expect(3) = 4e-16
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V T L IA +K WE+H M
Sbjct: 1042 VRTFLAIAASKNWELHQM 1059
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 80.9 bits (198), Expect(3) = 4e-16
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ +P VCRLRKSLYGL Q P+C FSKL ALK GF SY DYSLFTYT+ ++ +
Sbjct: 719 GFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQIN 778
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 779 VLVYVDDLIISG 790
Score = 25.8 bits (55), Expect(3) = 4e-16
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 698 DVHNAFLHGDLEEEVYMKL 716
Score = 23.1 bits (48), Expect(3) = 4e-16
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 1 IVLTLLVIAVTKGWEIH*M 57
+V L IA +K WE+H M
Sbjct: 679 MVRAFLAIAASKNWELHQM 697
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 80.9 bits (198), Expect(3) = 5e-16
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ +P VCRLRKSLYGL Q P+C FSKL ALK GF SY DYSLFTYT+ ++ +
Sbjct: 798 GFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQIN 857
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 858 VLVYVDDLIISG 869
Score = 25.8 bits (55), Expect(3) = 5e-16
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 777 DVHNAFLHGDLEEEVYMKL 795
Score = 22.7 bits (47), Expect(3) = 5e-16
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V L IA +K WE+H M
Sbjct: 759 VRAFLAIAASKNWELHQM 776
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 78.2 bits (191), Expect(3) = 8e-16
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ +P +VCRLRKSLYGL Q P+C FSKLS AL+ GF SY DYSLF+ + D +
Sbjct: 1116 GFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIH 1175
Query: 278 V-PYMGDLIITG 310
V Y+ DLI+ G
Sbjct: 1176 VLVYVDDLIVAG 1187
Score = 25.8 bits (55), Expect(3) = 8e-16
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 1095 DVHNAFLHGDLEEEVYMRL 1113
Score = 24.6 bits (52), Expect(3) = 8e-16
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V T+L +A K WE+H M
Sbjct: 1077 VRTILAVAAAKDWEVHQM 1094
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 78.2 bits (191), Expect(3) = 8e-16
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ +P +VCRLRKSLYGL Q P+C FSKLS AL+ GF SY DYSLF+ + D +
Sbjct: 396 GFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIH 455
Query: 278 V-PYMGDLIITG 310
V Y+ DLI+ G
Sbjct: 456 VLVYVDDLIVAG 467
Score = 25.8 bits (55), Expect(3) = 8e-16
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 375 DVHNAFLHGDLEEEVYMRL 393
Score = 24.6 bits (52), Expect(3) = 8e-16
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V T+L +A K WE+H M
Sbjct: 357 VRTILAVAAAKDWEVHQM 374
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 79.3 bits (194), Expect(3) = 1e-15
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+S +P VCRLRKSLYGL Q P+C F+KL LK GF SY DYSLFTYT ++ +
Sbjct: 925 GFESXDPNLVCRLRKSLYGLKQAPRCWFAKLVTXLKGYGFLQSYSDYSLFTYTKGNVQIN 984
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 985 VLVYVDDLIISG 996
Score = 25.8 bits (55), Expect(3) = 1e-15
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 904 DVHNAFLHGDLEEEVYMKL 922
Score = 22.7 bits (47), Expect(3) = 1e-15
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V L IA +K WE+H M
Sbjct: 886 VRAFLAIAASKNWELHQM 903
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 82.0 bits (201), Expect(2) = 2e-15
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GFQ +P +VCRL KSLYGL Q P+C FSKLS+ALK GF S DYSLF+Y + IF+
Sbjct: 1088 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVH 1147
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 1148 VLVYVDDLIISG 1159
Score = 25.8 bits (55), Expect(2) = 2e-15
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 1067 DVHNAFLHGDLKEEVYMKL 1085
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 81.3 bits (199), Expect(3) = 2e-15
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+S +P VCRLRKSLYGL Q P+C F+KL ALK GF SY DYSLFTYT ++ +
Sbjct: 793 GFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQIN 852
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 853 VLVYVDDLIISG 864
Score = 23.5 bits (49), Expect(3) = 2e-15
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAF HGDL E + L
Sbjct: 772 DVHNAFSHGDLEEEVYMKL 790
Score = 22.7 bits (47), Expect(3) = 2e-15
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V L IA +K WE+H M
Sbjct: 754 VRAFLAIAASKNWELHQM 771
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 81.6 bits (200), Expect(2) = 2e-15
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GFQ +P +VCRL KSLYGL Q P+C FSKLS+ALK GF S DYSLF+Y + +F+
Sbjct: 729 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVH 788
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 789 VLVYVDDLIISG 800
Score = 25.8 bits (55), Expect(2) = 2e-15
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 708 DVHNAFLHGDLKEEVYMKL 726
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 81.6 bits (200), Expect(2) = 2e-15
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GFQ +P +VCRL KSLYGL Q P+C FSKLS+ALK GF S DYSLF+Y + +F+
Sbjct: 729 GFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVH 788
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 789 VLVYVDDLIISG 800
Score = 25.8 bits (55), Expect(2) = 2e-15
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 708 DVHNAFLHGDLKEEVYMKL 726
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 78.2 bits (191), Expect(3) = 3e-15
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+S +P VCRL KSLYGL Q P+C F+KL ALK GF SY DYSLFTYT ++ +
Sbjct: 749 GFESSDPNLVCRLWKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQIN 808
Query: 278 V-PYMGDLIITG 310
V Y+ DLII+G
Sbjct: 809 VLVYVDDLIISG 820
Score = 25.8 bits (55), Expect(3) = 3e-15
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 728 DVHNAFLHGDLEEEVYMKL 746
Score = 22.7 bits (47), Expect(3) = 3e-15
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V L IA +K WE+H M
Sbjct: 710 VRAFLAIAASKNWELHQM 727
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 77.0 bits (188), Expect(3) = 6e-15
Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+S +P VCRLRKSLYGL Q P+C F+KL ALK GF SY +YSLFTYT ++ +
Sbjct: 1081 GFESSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSNYSLFTYTKGNVQIN 1140
Query: 278 V-PYMGDLIIT 307
V Y+ DLII+
Sbjct: 1141 VLVYVDDLIIS 1151
Score = 25.8 bits (55), Expect(3) = 6e-15
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 1060 DVHNAFLHGDLEEEVYMKL 1078
Score = 22.7 bits (47), Expect(3) = 6e-15
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V L IA +K WE+H M
Sbjct: 1042 VRAFLAIAASKNWELHQM 1059
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 74.7 bits (182), Expect(3) = 8e-14
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFL- 274
GF++ P +VCRLRK+LYGL Q P+C F KL+ ALK GF+ S DYSLFT + +
Sbjct: 953 GFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIK 1012
Query: 275 FVPYMGDLIITG 310
+ Y+ DLIITG
Sbjct: 1013 ILIYVDDLIITG 1024
Score = 25.8 bits (55), Expect(3) = 8e-14
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 932 DVHNAFLHGDLREEVYMKL 950
Score = 21.2 bits (43), Expect(3) = 8e-14
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 4 VLTLLVIAVTKGWEIH*M 57
V L +AV + WEIH M
Sbjct: 914 VRLFLDVAVKRNWEIHQM 931
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 73.9 bits (180), Expect(2) = 4e-13
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ P +VCRLRKSLYGL Q P+C F KLS +L GF SY DYSLF+YT +I L
Sbjct: 1121 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELR 1180
Query: 278 V-PYMGDLIITG 310
V Y+ DL+I G
Sbjct: 1181 VLIYVDDLLICG 1192
Score = 25.8 bits (55), Expect(2) = 4e-13
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 1100 DVHNAFLHGDLEEEVYMKL 1118
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 73.9 bits (180), Expect(2) = 4e-13
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ P +VCRLRKSLYGL Q P+C F KLS ALK GF Y DYS F+Y+ + I L
Sbjct: 1111 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELR 1170
Query: 278 V-PYMGDLIITG 310
V Y+ DLII G
Sbjct: 1171 VLVYVDDLIICG 1182
Score = 25.8 bits (55), Expect(2) = 4e-13
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 1090 DVHNAFLHGDLEEEVYMKL 1108
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 73.9 bits (180), Expect(2) = 4e-13
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ P +VCRLRKSLYGL Q P+C F KLS ALK GF Y DYS F+Y+ + I L
Sbjct: 1111 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELR 1170
Query: 278 V-PYMGDLIITG 310
V Y+ DLII G
Sbjct: 1171 VLVYVDDLIICG 1182
Score = 25.8 bits (55), Expect(2) = 4e-13
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V+NAFLHGDL E + L
Sbjct: 1090 DVHNAFLHGDLEEEVYMKL 1108
>emb|CAN83978.1| hypothetical protein VITISV_007067 [Vitis vinifera]
Length = 514
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF S PG+VCRLR +LYGL Q P+C F+KL+AAL GF+ SY DY LFTY +Q I L
Sbjct: 152 GFMSLTPGKVCRLRNTLYGLRQAPRCWFAKLAAALXGYGFKQSYSDYLLFTYEAQHIQLN 211
Query: 278 V-PYMGDLIITG 310
V Y+ D+II+G
Sbjct: 212 VLVYVDDIIISG 223
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 69.7 bits (169), Expect(2) = 1e-11
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF++ + +VCRLRKSLYGL Q P+C F+KL++ALK GF DYSLF + + L
Sbjct: 1106 GFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLTSALKNYGFIQDISDYSLFIFHKNGVRLH 1165
Query: 278 V-PYMGDLIITG 310
V Y+ DLIITG
Sbjct: 1166 VLVYVDDLIITG 1177
Score = 25.4 bits (54), Expect(2) = 1e-11
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 57 EVYNAFLHGDLIE 95
+V+NAFLHGDL E
Sbjct: 1085 DVHNAFLHGDLDE 1097
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 69.7 bits (169), Expect(2) = 2e-11
Identities = 39/72 (54%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 GFQSPEPGQVCRLRKSLYGL*QIPQCRFSKLSAALK*CGFRHSYVDYSLFTYTSQDIFLF 277
GF+ P +VCRLRKSLYGL Q P+C F KLS AL GF + DYS F+YT I L
Sbjct: 768 GFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALLRFGFVQGHEDYSFFSYTRNGIELR 827
Query: 278 V-PYMGDLIITG 310
V Y+ DL+I G
Sbjct: 828 VLVYVDDLLICG 839
Score = 24.3 bits (51), Expect(2) = 2e-11
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 57 EVYNAFLHGDLIESGFSLL 113
+V NAFLHGDL E + L
Sbjct: 747 DVNNAFLHGDLDEEVYMKL 765