BLASTX nr result
ID: Catharanthus23_contig00026044
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00026044
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534418.1| Structural maintenance of chromosome, putati... 102 7e-20
ref|XP_006482597.1| PREDICTED: structural maintenance of chromos... 100 3e-19
ref|XP_006373322.1| hypothetical protein POPTR_0017s11950g [Popu... 99 6e-19
gb|EMJ18852.1| hypothetical protein PRUPE_ppa000362mg [Prunus pe... 99 6e-19
ref|XP_002323859.1| hypothetical protein POPTR_0017s11950g [Popu... 99 6e-19
gb|EXB31972.1| Structural maintenance of chromosomes protein 4 [... 97 2e-18
ref|XP_006431152.1| hypothetical protein CICLE_v10010934mg [Citr... 97 2e-18
ref|XP_006593676.1| PREDICTED: structural maintenance of chromos... 97 3e-18
ref|XP_006593675.1| PREDICTED: structural maintenance of chromos... 97 3e-18
gb|ESW23226.1| hypothetical protein PHAVU_004G029000g [Phaseolus... 97 3e-18
gb|EOY03465.1| Structural maintenance of chromosome 3 isoform 2 ... 97 3e-18
gb|EOY03464.1| Structural maintenance of chromosome 3 isoform 1 ... 97 3e-18
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos... 97 3e-18
emb|CBI22212.3| unnamed protein product [Vitis vinifera] 97 3e-18
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos... 96 4e-18
ref|XP_004293216.1| PREDICTED: structural maintenance of chromos... 96 6e-18
ref|XP_006395325.1| hypothetical protein EUTSA_v10003529mg [Eutr... 94 1e-17
ref|XP_004301999.1| PREDICTED: structural maintenance of chromos... 94 1e-17
ref|NP_199671.1| structural maintenance of chromosomes protein 4... 94 1e-17
ref|NP_001190492.1| structural maintenance of chromosomes protei... 94 1e-17
>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
gi|223525329|gb|EEF27966.1| Structural maintenance of
chromosome, putative [Ricinus communis]
Length = 1259
Score = 102 bits (253), Expect = 7e-20
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA
Sbjct: 1210 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 1258
>ref|XP_006482597.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Citrus sinensis]
Length = 1241
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNAG 171
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF VC NAG
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFTVCENAG 1239
>ref|XP_006373322.1| hypothetical protein POPTR_0017s11950g [Populus trichocarpa]
gi|550320084|gb|ERP51119.1| hypothetical protein
POPTR_0017s11950g [Populus trichocarpa]
Length = 1300
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC NA
Sbjct: 1251 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCQNA 1299
>gb|EMJ18852.1| hypothetical protein PRUPE_ppa000362mg [Prunus persica]
Length = 1245
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC NA
Sbjct: 1196 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCENA 1244
>ref|XP_002323859.1| hypothetical protein POPTR_0017s11950g [Populus trichocarpa]
gi|222866861|gb|EEF03992.1| hypothetical protein
POPTR_0017s11950g [Populus trichocarpa]
Length = 1256
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC NA
Sbjct: 1207 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCQNA 1255
>gb|EXB31972.1| Structural maintenance of chromosomes protein 4 [Morus notabilis]
Length = 1239
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF VC NA
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCENA 1238
>ref|XP_006431152.1| hypothetical protein CICLE_v10010934mg [Citrus clementina]
gi|567877127|ref|XP_006431153.1| hypothetical protein
CICLE_v10010934mg [Citrus clementina]
gi|557533209|gb|ESR44392.1| hypothetical protein
CICLE_v10010934mg [Citrus clementina]
gi|557533210|gb|ESR44393.1| hypothetical protein
CICLE_v10010934mg [Citrus clementina]
Length = 1239
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF VC NA
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFTVCENA 1238
>ref|XP_006593676.1| PREDICTED: structural maintenance of chromosomes protein 4-like
isoform X2 [Glycine max]
Length = 1084
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC A
Sbjct: 1035 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1083
>ref|XP_006593675.1| PREDICTED: structural maintenance of chromosomes protein 4-like
isoform X1 [Glycine max]
Length = 1242
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC A
Sbjct: 1193 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1241
>gb|ESW23226.1| hypothetical protein PHAVU_004G029000g [Phaseolus vulgaris]
Length = 1241
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC A
Sbjct: 1192 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1240
>gb|EOY03465.1| Structural maintenance of chromosome 3 isoform 2 [Theobroma cacao]
Length = 1239
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC A
Sbjct: 1190 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1238
>gb|EOY03464.1| Structural maintenance of chromosome 3 isoform 1 [Theobroma cacao]
Length = 1245
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC A
Sbjct: 1196 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1244
>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Vitis vinifera]
Length = 1486
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC A
Sbjct: 1437 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1485
>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
Length = 1253
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/49 (95%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC A
Sbjct: 1204 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCEKA 1252
>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Glycine max]
Length = 1242
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFV+C A
Sbjct: 1193 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVICEKA 1241
>ref|XP_004293216.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Fragaria vesca subsp. vesca]
Length = 1243
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITI+PG FVVC NA
Sbjct: 1193 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITIDPGKFVVCENA 1241
>ref|XP_006395325.1| hypothetical protein EUTSA_v10003529mg [Eutrema salsugineum]
gi|557091964|gb|ESQ32611.1| hypothetical protein
EUTSA_v10003529mg [Eutrema salsugineum]
Length = 1246
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC 183
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF VC
Sbjct: 1196 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVC 1241
>ref|XP_004301999.1| PREDICTED: structural maintenance of chromosomes protein 4-like
[Fragaria vesca subsp. vesca]
Length = 1341
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVCGNA 174
RTKDAQFIIISLRNNMFELADRLVGIYKT NCTKSITINPGSFV+C A
Sbjct: 1192 RTKDAQFIIISLRNNMFELADRLVGIYKTHNCTKSITINPGSFVICNQA 1240
>ref|NP_199671.1| structural maintenance of chromosomes protein 4 [Arabidopsis
thaliana] gi|75333958|sp|Q9FJL0.1|SMC4_ARATH RecName:
Full=Structural maintenance of chromosomes protein 4;
Short=AtSMC4; Short=SMC protein 4; Short=SMC-4; AltName:
Full=Chromosome-associated protein C; Short=AtCAP-C
gi|10177350|dbj|BAB10693.1| chromosome condensation
protein [Arabidopsis thaliana]
gi|332008311|gb|AED95694.1| structural maintenance of
chromosomes protein 4 [Arabidopsis thaliana]
Length = 1241
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC 183
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF VC
Sbjct: 1191 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVC 1236
>ref|NP_001190492.1| structural maintenance of chromosomes protein 4 [Arabidopsis
thaliana] gi|332008312|gb|AED95695.1| structural
maintenance of chromosomes protein 4 [Arabidopsis
thaliana]
Length = 1244
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = -1
Query: 320 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVC 183
RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSF VC
Sbjct: 1194 RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVC 1239