BLASTX nr result
ID: Catharanthus23_contig00026015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00026015
(267 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,... 118 9e-25
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus pe... 112 4e-23
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 112 5e-23
gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao] 111 1e-22
gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossyp... 110 3e-22
ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 108 1e-21
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum] 108 1e-21
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp... 108 1e-21
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp... 108 1e-21
gb|ESW20019.1| hypothetical protein PHAVU_006G174200g [Phaseolus... 107 1e-21
ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp... 107 2e-21
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ... 104 1e-20
ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Caps... 101 9e-20
>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 640
Score = 118 bits (295), Expect = 9e-25
Identities = 57/89 (64%), Positives = 69/89 (77%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V DL T+V VLAACA N L RV+H +AIKA +D+++TF N LLD Y KCGD+N A+
Sbjct: 297 VSFDLVTLVNVLAACANSGNFPLGRVLHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAI 356
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF+ MGERS+VSWTS+IAGYAREGLS E
Sbjct: 357 RVFQKMGERSVVSWTSLIAGYAREGLSGE 385
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/86 (39%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T+ VL ACA +L + + +H Y + M K N L+D Y KCG M A VF
Sbjct: 401 DNFTVTAVLHACACSGSLEIGKDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMEDANLVF 460
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
M + IVSW +MI GY++ G +E
Sbjct: 461 LEMPNKDIVSWNTMIGGYSKNGRPNE 486
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/77 (38%), Positives = 41/77 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM +L ACA + L R IHGY + G + N L+D Y KCG + A F
Sbjct: 501 DGRTMACILPACASLAALDRGREIHGYIQRNGCFDDLHVANALIDMYAKCGALALARLFF 560
Query: 190 ESMGERSIVSWTSMIAG 240
+ + + ++SWT MIAG
Sbjct: 561 DMIPVKDLISWTVMIAG 577
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ V+ T+ +L A + ++ +HGY +K G T N L+ YFK + AA
Sbjct: 196 IQVNSHTVSCILKCFAALGSVKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAAY 255
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF+ + R IVSW SMI+G L ++
Sbjct: 256 EVFDELKNRDIVSWNSMISGTVANDLPEK 284
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 117 bits (292), Expect = 2e-24
Identities = 56/88 (63%), Positives = 68/88 (77%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ DLATMV V+A C+ L L R +HGYAIKA K++T NN LLD Y K G++N+A+
Sbjct: 247 INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAI 306
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE+MGERS+VSWTSMIAGYAREGLSD
Sbjct: 307 QVFETMGERSVVSWTSMIAGYAREGLSD 334
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/83 (38%), Positives = 45/83 (54%)
Frame = +1
Query: 19 TMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVFESM 198
TM +L ACA + L + IHG+ ++ G N L+D Y KCG + A +F+ +
Sbjct: 454 TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI 513
Query: 199 GERSIVSWTSMIAGYAREGLSDE 267
E+ +VSWT MIAGY G E
Sbjct: 514 PEKDLVSWTVMIAGYGMHGYGSE 536
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ D+ T+ +L ACA L + +H Y + M + +N L+D Y KCG M A
Sbjct: 348 ISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAH 407
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
SVF M + IVSW +MI GY++ L +E
Sbjct: 408 SVFSEMQVKDIVSWNTMIGGYSKNSLPNE 436
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 114 bits (284), Expect = 2e-23
Identities = 54/86 (62%), Positives = 65/86 (75%)
Frame = +1
Query: 7 VDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSV 186
VDLATMV VL+ CA L R +H +A+KA K+I+FNN LLD Y KCGD++ A+ V
Sbjct: 297 VDLATMVTVLSGCANCGALMFGRAVHAFALKACFSKEISFNNTLLDMYSKCGDLDGAIRV 356
Query: 187 FESMGERSIVSWTSMIAGYAREGLSD 264
FE MGERS+VSWTSMIAGYAREG+ D
Sbjct: 357 FEKMGERSVVSWTSMIAGYAREGVFD 382
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM +L ACA + L R IHGY ++ G+ N ++D Y KCG + A S+F
Sbjct: 499 DGVTMACILPACASLAALERGREIHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLF 558
Query: 190 ESMGERSIVSWTSMIAGYAREG 255
+ + + ++SWT MIAGY G
Sbjct: 559 DMIPAKDLISWTIMIAGYGMHG 580
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D+ + +L ACA L + + +H Y + M + +N L+D Y KCG M A SVF
Sbjct: 399 DVYAITSILHACACDGLLEIGKDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVF 458
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
M + IVSW +MI GY++ +E
Sbjct: 459 NQMPVKDIVSWNTMIGGYSKNSCPNE 484
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ D T VL A + N+ +HG+ +K G T N L+ YFK + A
Sbjct: 194 IAADSYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITYYFKSRRVKDAH 253
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
+F+ + +R +VSW MI+GY G++++
Sbjct: 254 KLFDELSDRDVVSWNCMISGYIANGVAEK 282
>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 113 bits (282), Expect = 3e-23
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT++ VL AC+ N+ L RV+HGYA+K G D + N +LD Y KCGD++ AV
Sbjct: 293 IDVDLATIINVLMACSDCGNVVLGRVVHGYAMKGGFDVDVVLCNSVLDMYSKCGDLSDAV 352
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VFE MG RS+VSWTSMIAGY REGLSD+
Sbjct: 353 RVFEKMGRRSVVSWTSMIAGYVREGLSDK 381
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/86 (40%), Positives = 48/86 (55%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D+ T+ +L ACA +L + IH Y + MD + N L+D Y KCG M A SVF
Sbjct: 397 DVYTITSILHACACSGSLEKGKDIHKYIREHDMDSSLFVCNSLMDMYAKCGSMEDADSVF 456
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
M + IVSW +MI GY++ L +E
Sbjct: 457 SHMPMKDIVSWNTMIGGYSKNCLPNE 482
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/86 (36%), Positives = 45/86 (52%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T+ VL ACA + L + IHGY ++ G N L+D Y KCG + A +F
Sbjct: 497 DSMTLASVLPACASLAALDRGQEIHGYLLRHGYFLDQYVANALVDMYVKCGVLILARVLF 556
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
E + + ++S+T +IAGY G E
Sbjct: 557 EMIPVKDLISYTVIIAGYGMHGFGKE 582
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 113 bits (282), Expect = 3e-23
Identities = 54/89 (60%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAG-MDKKITFNNGLLDAYFKCGDMNAA 177
V +DLATMV V ACA I L L +V+H Y+IKA +D+++ FNN LLD Y KCGD+N+A
Sbjct: 348 VDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSA 407
Query: 178 VSVFESMGERSIVSWTSMIAGYAREGLSD 264
+ VFE M E+++VSWTSMI GY REGLSD
Sbjct: 408 IRVFERMDEKTVVSWTSMITGYVREGLSD 436
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T+ +L ACA + L R IHGYA++ G + N ++D Y KCG + A S+F
Sbjct: 553 DGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLF 612
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G E
Sbjct: 613 DMIPNKDLVSWTVMIAGYGMHGYGSE 638
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D+ + +L ACA NL +++H Y + ++ +N L D Y KCG M A VF
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF 512
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
M ++ ++SW +MI GY + L +E
Sbjct: 513 SHMKKKDVISWNTMIGGYTKNSLPNE 538
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +1
Query: 19 TMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVFESM 198
T +L A + + R +HG K G + T N L+ YF + A +F+ +
Sbjct: 253 TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL 312
Query: 199 GERSIVSWTSMIAGYAREGLSD 264
+R ++SW SMI+GY + GL D
Sbjct: 313 TDRDVISWNSMISGYVKNGLDD 334
>gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 112 bits (281), Expect = 4e-23
Identities = 55/89 (61%), Positives = 66/89 (74%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V VDLAT++ VL AC+ NLSL R +H YAIK +D I F N +LD Y KCGD+++A
Sbjct: 219 VDVDLATVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSAT 278
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF MG+RS+VSWTSMIAGY REGLSDE
Sbjct: 279 QVFGKMGQRSVVSWTSMIAGYVREGLSDE 307
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/89 (43%), Positives = 51/89 (57%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V D+ T+ +L ACA +L R IH Y + GMD + N L+D Y KCG M A
Sbjct: 320 VSPDVYTITSILHACACNGSLKKGRDIHKYIREHGMDSSLFVCNTLMDMYAKCGSMEDAH 379
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
SVF SM + IVSW +MI GY++ L +E
Sbjct: 380 SVFSSMPVKDIVSWNTMIGGYSKNCLPNE 408
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T+ VL ACA + L+ + IHG+ ++ G N L+D Y KCG + A +F
Sbjct: 423 DGMTIASVLPACASLAALNRGQEIHGHILRNGYFSDRYVANALVDMYVKCGVLVLARLLF 482
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + ++SWT ++AGY G E
Sbjct: 483 DIIPIKDLISWTVIVAGYGMHGFGSE 508
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 112 bits (280), Expect = 5e-23
Identities = 57/89 (64%), Positives = 65/89 (73%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V VDLAT+V L ACA I L R +H YAIKA D +I F N LLD Y KCG+++AAV
Sbjct: 301 VNVDLATIVNALVACANIGTHLLGRAVHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAV 360
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VFE GERS+VSWTSMIAGYAREG S+E
Sbjct: 361 QVFEKTGERSVVSWTSMIAGYAREGRSNE 389
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/89 (37%), Positives = 51/89 (57%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V D+ T+ +L ACA +L + +H Y ++GM+ + N L+D Y KCG M+ A
Sbjct: 402 VSPDIFTITSILHACACSGSLEDGKDVHNYIRESGMESNLFVCNALMDMYSKCGSMDDAN 461
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF M + I+SW +MI GY++ L +E
Sbjct: 462 LVFSRMPAKDIISWNTMIGGYSKNRLPNE 490
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/86 (36%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T +L ACA + L+ R IHG+ ++ G + N L+D Y KCG + A +F
Sbjct: 505 DSITAACILPACASLAALAKGREIHGHVLRNGYFQDRHVANALVDMYVKCGLLALAQVLF 564
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + ++SWT MIAGY G E
Sbjct: 565 DMIPVKDLISWTVMIAGYGMHGFGRE 590
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 19 TMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVFESM 198
T+ VL + NL IH Y K G T N L+ YFK G + +A VF+ +
Sbjct: 206 TLSCVLKCFGALGNLKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDEL 265
Query: 199 GERSIVSWTSMIAGYAREGLSDE 267
+R ++SW SMI+GY+ GL ++
Sbjct: 266 TDRDVISWNSMISGYSSNGLGEK 288
>gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]
Length = 874
Score = 111 bits (277), Expect = 1e-22
Identities = 52/88 (59%), Positives = 65/88 (73%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT+V VL CA LSL + +H AIKA ++K+ FNN LLD Y KCGD++ A+
Sbjct: 297 IDVDLATIVTVLVGCANSGTLSLGKAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGAL 356
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE MGER++VSWTSMIAGY R+G SD
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGQSD 384
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D+ + VL ACA+ +L + +H Y ++ + N L+D Y KCG M A
Sbjct: 398 VKLDVVAITSVLHACARSGSLENGKDVHDYIKANNVESNLFVCNALMDMYAKCGSMEDAN 457
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
S+F M + I+SW +MI GY++ L +E
Sbjct: 458 SIFSRMAVKDIISWNTMIGGYSKNCLPNE 486
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T+ +L ACA + L + IHG+ ++ G N L+D Y KCG + A +F
Sbjct: 501 DSRTLACILPACASLAALERGKEIHGHILRNGYFSDRHVANALVDLYVKCGVLALARLLF 560
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G ++E
Sbjct: 561 DMISSKDLVSWTVMIAGYGMHGFANE 586
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/89 (31%), Positives = 46/89 (51%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VD T +L A L +HGY +K G + N L+ YFK + +A
Sbjct: 196 IEVDSYTFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLITFYFKGKRVESAS 255
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
+F+ + +R ++SW SMI+GY GL+++
Sbjct: 256 ELFDELIDRDVISWNSMISGYVSNGLAEK 284
>gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 110 bits (274), Expect = 3e-22
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT++ VL CAK LSL + +H AIK+ +++I F+N LLD Y KCGD++ A+
Sbjct: 109 IDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 168
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE MGER++VSWTSMIAGY R+G SD
Sbjct: 169 RVFEKMGERNVVSWTSMIAGYTRDGWSD 196
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/86 (38%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM +L ACA + L + IHGY ++ G N L+D Y KCG + A +F
Sbjct: 293 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 352
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G +E
Sbjct: 353 DMIPSKDLVSWTVMIAGYGMHGYGNE 378
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D+ + +L ACA+ +L + +H Y M + N L+D Y KCG M A
Sbjct: 210 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGAN 269
Query: 181 SVFESMGERSIVSWTSMI 234
SVF +M + I+SW +M+
Sbjct: 270 SVFSTMVVKDIISWNTMV 287
>ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 873
Score = 109 bits (273), Expect = 3e-22
Identities = 49/89 (55%), Positives = 67/89 (75%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
VGVDLAT+V +AACA + +LSL R +HG +KA +++ FNN LLD Y KCG++N A+
Sbjct: 296 VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAI 355
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
FE MG++++VSWTS+IA Y REGL D+
Sbjct: 356 QAFEKMGQKTVVSWTSLIAAYVREGLYDD 384
Score = 67.0 bits (162), Expect = 2e-09
Identities = 35/89 (39%), Positives = 48/89 (53%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V D+ +M VL ACA +L R +H Y K M + +N L+D Y KCG M A
Sbjct: 397 VSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAY 456
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF + + IVSW +MI GY++ L +E
Sbjct: 457 LVFSQIPVKDIVSWNTMIGGYSKNSLPNE 485
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM +L AC + L + R IHG ++ G ++ N L+D Y KCG + A +F
Sbjct: 500 DGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLF 559
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + E+ +++WT MI+G GL +E
Sbjct: 560 DMIPEKDLITWTVMISGCGMHGLGNE 585
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +1
Query: 19 TMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVFESM 198
T +L A + + + IHG K G T N L+ YFK G++++A +F+ +
Sbjct: 201 TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 260
Query: 199 GERSIVSWTSMIAGYAREGLS 261
G+R +VSW SMI+G G S
Sbjct: 261 GDRDVVSWNSMISGCVMNGFS 281
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 108 bits (269), Expect = 1e-21
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT++ VL CA LSL + +H AIK+ +++I F+N LLD Y KCGD++ A+
Sbjct: 297 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 356
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE MGER++VSWTSMIAGY R+G SD
Sbjct: 357 RVFEKMGERNVVSWTSMIAGYTRDGWSD 384
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/86 (38%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM +L ACA + L + IHGY ++ G N L+D Y KCG + A +F
Sbjct: 501 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 560
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G +E
Sbjct: 561 DMIPSKDLVSWTVMIAGYGMHGYGNE 586
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D+ + +L ACA+ +L + +H Y M + N L+D Y KCG M A
Sbjct: 398 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGAN 457
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
SVF +M + I+SW +M+ GY++ L +E
Sbjct: 458 SVFSTMVVKDIISWNTMVGGYSKNCLPNE 486
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ V+ T VL A + +L +HGY +K G + N L+ YFK +A
Sbjct: 196 IEVNSYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVNSLIAFYFKGKRPESAS 255
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
+F+ + +R ++SW SMI+GY GL++
Sbjct: 256 ELFDKLCDRDVISWNSMISGYVSNGLTE 283
>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 108 bits (269), Expect = 1e-21
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT++ VL CA LSL + +H AIK+ +++I F+N LLD Y KCGD++ A+
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE MGER++VSWTSMIAGY R+G SD
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSD 334
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/86 (39%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM VL ACA + L + IHGY ++ G N L+D Y KCG + A +F
Sbjct: 431 DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G +E
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNE 516
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D+ + +L ACA+ +L + +H Y M+ + N L+D Y KCG M AA
Sbjct: 348 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAAN 407
Query: 181 SVFESMGERSIVSWTSMI 234
SVF +M + I+SW +MI
Sbjct: 408 SVFSTMVVKDIISWNTMI 425
>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 108 bits (269), Expect = 1e-21
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT++ VL CA LSL + +H AIK+ +++I F+N LLD Y KCGD++ A+
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE MGER++VSWTSMIAGY R+G SD
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSD 334
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/86 (38%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM +L ACA + L + IHGY ++ G N L+D Y KCG + A +F
Sbjct: 431 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G +E
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNE 516
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D+ + +L ACA+ +L + +H Y M + N L+D Y KCG M A
Sbjct: 348 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGAN 407
Query: 181 SVFESMGERSIVSWTSMI 234
SVF +M + I+SW +M+
Sbjct: 408 SVFSTMVVKDIISWNTMV 425
>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 108 bits (269), Expect = 1e-21
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT++ VL CA LSL + +H AIK+ +++I F+N LLD Y KCGD++ A+
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE MGER++VSWTSMIAGY R+G SD
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSD 334
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/86 (39%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM VL ACA + L + IHGY ++ G N L+D Y KCG + A +F
Sbjct: 431 DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G +E
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNE 516
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D+ + +L ACA+ +L + +H Y M+ + N L+D Y KCG M AA
Sbjct: 348 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAAN 407
Query: 181 SVFESMGERSIVSWTSMI 234
SVF +M + I+SW +MI
Sbjct: 408 SVFSTMVVKDIISWNTMI 425
>gb|ESW20019.1| hypothetical protein PHAVU_006G174200g [Phaseolus vulgaris]
Length = 871
Score = 107 bits (268), Expect = 1e-21
Identities = 48/89 (53%), Positives = 66/89 (74%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
VGVDLAT+V VL ACA + +LS R +HG+ +KA +++ FNN LLD Y KCG++N A+
Sbjct: 295 VGVDLATLVNVLVACANVGSLSFGRAVHGHGVKACFGREVRFNNTLLDMYSKCGNLNDAI 354
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF MG+ ++VSWTS+I+ Y REGL D+
Sbjct: 355 QVFGKMGQTTVVSWTSLISAYVREGLYDD 383
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/86 (37%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM VL AC + L + R IHG ++ G + N L+D Y KCG + A +F
Sbjct: 499 DGITMACVLPACGSLAALDIGRGIHGCILRNGYLSDLYVVNALIDMYVKCGSLVHAQFLF 558
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + E+ ++SWT MI GY G +E
Sbjct: 559 DMISEKDLISWTVMITGYGMHGFGNE 584
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/89 (37%), Positives = 47/89 (52%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V D+ +M VL ACA +L R +H Y K + + +N L++ Y KCG M A
Sbjct: 396 VSPDVYSMTSVLHACAHSNSLDKGRDLHNYFRKNNVTLSLPVSNALMNMYAKCGSMEEAY 455
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF + + IVSW MI GY++ L +E
Sbjct: 456 LVFSQIPVKDIVSWNIMIGGYSKNTLPNE 484
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1
Query: 79 IHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVFESMGERSIVSWTSMIAGYAREGL 258
IHGY K G T N L+ YFK G ++ A +F+ +G+R +VSW SMI+G G
Sbjct: 220 IHGYIYKLGFGSYNTVVNSLIATYFKSGGVDNAHKLFDELGDRDVVSWNSMISGCVMNGF 279
Query: 259 S 261
S
Sbjct: 280 S 280
>ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502140652|ref|XP_004504289.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 879
Score = 107 bits (268), Expect = 1e-21
Identities = 51/89 (57%), Positives = 63/89 (70%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
VGVDL T+V VL ACA I NLSL R +H + +KA ++ F+N LLD Y KCG++N A
Sbjct: 302 VGVDLTTLVSVLVACANIGNLSLGRALHAFGVKAPFSGEVVFSNTLLDMYSKCGNLNGAT 361
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF MGE +IVSWTS+IA Y REGL D+
Sbjct: 362 EVFVKMGETTIVSWTSIIAAYVREGLYDD 390
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D+ T+ ++ ACA +L R +H Y IK M + N L++ Y KCG M A VF
Sbjct: 406 DIYTVTSIVHACACSNSLDKGRDVHSYVIKNSMVSNLPVANALMNMYAKCGSMEEARLVF 465
Query: 190 ESMGERSIVSWTSMIAGYAREGL 258
+ + IVSW +MI GY++ L
Sbjct: 466 SQIPAKDIVSWNTMIGGYSKNSL 488
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/86 (37%), Positives = 47/86 (54%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM VL ACA + L R IHG+ ++ G + L+D Y KCG + A +F
Sbjct: 506 DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQILF 565
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + ++ ++SWT MIAGY G +E
Sbjct: 566 DMIPKKDLISWTVMIAGYGMHGFGNE 591
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/84 (33%), Positives = 42/84 (50%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T VL + + + +HGY +K G N L+ AYFK G + +A ++F
Sbjct: 204 DSYTFTCVLKCFTALGKVKECKRVHGYVLKLGFGSSTAVVNSLIAAYFKFGGVESAHNLF 263
Query: 190 ESMGERSIVSWTSMIAGYAREGLS 261
+ + +R +VSW SMI G G S
Sbjct: 264 DELSDRDVVSWNSMINGCVVNGFS 287
>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 107 bits (267), Expect = 2e-21
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ VDLAT++ VL CA LSL + +H AIK+ +++I F+N LLD Y KCGD++ A+
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSD 264
VFE MGER++VSWTSMIAGY R+G SD
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSD 334
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/86 (37%), Positives = 46/86 (53%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM +L ACA + L + IHGY ++ G N L+D Y KCG + A +F
Sbjct: 431 DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MI+GY G +E
Sbjct: 491 DMIPSKDLVSWTVMISGYGMHGYGNE 516
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D+ +L ACA+ +L + +H Y M+ + N L+D Y KCG M+ A
Sbjct: 348 VKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGAN 407
Query: 181 SVFESMGERSIVSWTSMI 234
SVF +M + I+SW +MI
Sbjct: 408 SVFSTMVVKDIISWNTMI 425
>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 908
Score = 104 bits (259), Expect = 1e-20
Identities = 49/86 (56%), Positives = 62/86 (72%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V VDL T+V VL ACA I NLSL R +HG+ +KA +++ F+N LLD Y KCG++N A
Sbjct: 292 VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGAT 351
Query: 181 SVFESMGERSIVSWTSMIAGYAREGL 258
VF MG+ +IVSWTS+IA Y REGL
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGL 377
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D+ T+ ++ ACA +L R +H Y IK GM + N L++ Y KCG + A VF
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 455
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + IVSW +MI GY++ L +E
Sbjct: 456 SKIPVKDIVSWNTMIGGYSQNLLPNE 481
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/86 (37%), Positives = 47/86 (54%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM VL ACA + L R IHG+ ++ G + L+D Y KCG + A +F
Sbjct: 496 DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLF 555
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + ++ ++SWT MIAGY G +E
Sbjct: 556 DMIPKKDLISWTVMIAGYGMHGFGNE 581
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +1
Query: 19 TMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVFESM 198
T VL A + + + +HGY +K G N L+ AYFK G + +A ++F+ +
Sbjct: 197 TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 256
Query: 199 GERSIVSWTSMIAGYAREGLS 261
E +VSW SMI G G S
Sbjct: 257 SEPDVVSWNSMINGCVVNGFS 277
>ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like, partial [Glycine max]
Length = 832
Score = 102 bits (254), Expect = 5e-20
Identities = 50/89 (56%), Positives = 61/89 (68%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V VD AT+V VL ACA + NL+L R +H Y +KAG + FNN LLD Y KCG++N A
Sbjct: 316 VDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGAN 375
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF MGE +IVSWTS+IA + REGL E
Sbjct: 376 EVFVKMGETTIVSWTSIIAAHVREGLHYE 404
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +1
Query: 37 AACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVFESMGERSIV 216
AA AK+R + +HGY +K G N L+ AYFKCG++ +A +F+ + +R +V
Sbjct: 230 AASAKVREC---KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVV 286
Query: 217 SWTSMIAGYAREGLS 261
SW SMI+G G S
Sbjct: 287 SWNSMISGCTMNGFS 301
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D+ + V+ ACA +L R +H + K M + +N L++ Y KCG M A +F
Sbjct: 420 DIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIF 479
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ ++IVSW +MI GY++ L +E
Sbjct: 480 SQLPVKNIVSWNTMIGGYSQNSLPNE 505
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/86 (36%), Positives = 45/86 (52%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D TM VL ACA + L R IHG+ ++ G + L+D Y KCG + A +F
Sbjct: 520 DDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLF 579
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + ++ ++ WT MIAGY G E
Sbjct: 580 DMIPKKDMILWTVMIAGYGMHGFGKE 605
>ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Capsella rubella]
gi|482551147|gb|EOA15340.1| hypothetical protein
CARUB_v10004110mg [Capsella rubella]
Length = 872
Score = 101 bits (252), Expect = 9e-20
Identities = 50/89 (56%), Positives = 66/89 (74%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +DLAT+V V AACA R +SL R +HG+ +KA ++ F N LLD Y KCGD+++A
Sbjct: 293 VEIDLATIVSVFAACADSRLISLGRAVHGFGMKACFSREDRFCNTLLDMYSKCGDLDSAK 352
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
+VF M +RS+VS+TSMIAGYAREGL+ E
Sbjct: 353 AVFTEMSDRSVVSYTSMIAGYAREGLAGE 381
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/86 (38%), Positives = 44/86 (51%)
Frame = +1
Query: 10 DLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAVSVF 189
D T+ VL ACA + R IHGY ++ G N L+D Y KCG + A +F
Sbjct: 499 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARMLF 558
Query: 190 ESMGERSIVSWTSMIAGYAREGLSDE 267
+ + + +VSWT MIAGY G E
Sbjct: 559 DDIASKDLVSWTVMIAGYGMHGFGKE 584
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
+ D+ T+ VL CA+ R L + +H + + M I +N L+D Y KCG M A
Sbjct: 394 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMQEAE 453
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF M R I+SW ++I GY++ ++E
Sbjct: 454 LVFSEMRVRDIISWNTVIGGYSKNCYANE 482
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/89 (30%), Positives = 51/89 (57%)
Frame = +1
Query: 1 VGVDLATMVIVLAACAKIRNLSLSRVIHGYAIKAGMDKKITFNNGLLDAYFKCGDMNAAV 180
V +D T + + + +R+++ +HGY +K+G + + N L+ Y K +++A
Sbjct: 192 VEMDSYTFSCISKSFSSLRSVNGGEQLHGYILKSGFGDRNSVGNSLVAFYLKNQRVDSAR 251
Query: 181 SVFESMGERSIVSWTSMIAGYAREGLSDE 267
VF+ M ER ++SW S+I GY GL+++
Sbjct: 252 KVFDEMTERDVISWNSIINGYVSNGLAEQ 280