BLASTX nr result

ID: Catharanthus23_contig00025742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025742
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]    65   7e-09
ref|XP_006351553.1| PREDICTED: protein STICHEL-like 2-like [Sola...    64   2e-08
ref|XP_004236304.1| PREDICTED: uncharacterized protein LOC101254...    59   5e-07

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 39/111 (35%), Positives = 57/111 (51%)
 Frame = -3

Query: 334 YSHEISGYIGDVGSGPFRNVRIEDSNRGQTGEDMLRGNKSMSERYCSNYRDTGLELAYVM 155
           +S E  G+ G+ G  P    R +  +   T ++     KS+SERYCS  R+ GL+L  + 
Sbjct: 188 FSSENPGFFGNTGLAPTVTKRADGLDYCGTIKEEAYDKKSLSERYCSGLRENGLDLMNIT 247

Query: 154 PSSDYQEGAGSCNEPNEGSTQENKIDYNESNRARNFRKHPRSSKAAAGDVL 2
           PSS+  EGA SCN P  GS+   + D+  S     + K+   S    GDV+
Sbjct: 248 PSSNGLEGADSCNGPILGSSHAERTDHXASKWKSQY-KNQLKSFTGLGDVV 297


>ref|XP_006351553.1| PREDICTED: protein STICHEL-like 2-like [Solanum tuberosum]
          Length = 869

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/93 (38%), Positives = 54/93 (58%)
 Frame = -3

Query: 280 NVRIEDSNRGQTGEDMLRGNKSMSERYCSNYRDTGLELAYVMPSSDYQEGAGSCNEPNEG 101
           N  +E SN  Q  E + RGNK  S+R   +YRD G+ +  + PS+ ++EG GS  E NEG
Sbjct: 112 NGNVEMSNIRQPNE-IERGNKLSSKRLGHSYRDQGMAMTGMTPSNAWEEGNGSSKESNEG 170

Query: 100 STQENKIDYNESNRARNFRKHPRSSKAAAGDVL 2
           +     + Y      ++ ++H RSS+ AAGD+L
Sbjct: 171 AVPAKDVYYATKKNCKH-KRHNRSSRTAAGDIL 202


>ref|XP_004236304.1| PREDICTED: uncharacterized protein LOC101254779 [Solanum
           lycopersicum]
          Length = 1020

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = -3

Query: 301 VGSGPFR--NVRIEDSNRGQTGEDMLRGNKSMSERYCSNYRDTGLELAYVMPSSDYQEGA 128
           +GS P    N  +E SN  Q  E + RGNK  S+R   +YRD G+ +A +  S+ ++EG 
Sbjct: 103 LGSSPMDPWNGNVEMSNIHQPNE-VERGNKLSSKRLGHSYRDQGMAMAGITSSNAWEEGN 161

Query: 127 GSCNEPNEGSTQENKIDYNESNRARNFRKHPRSSKAAAGDV 5
           GS  E NEG+     + Y      ++ +KH RSS+ AA ++
Sbjct: 162 GSSKESNEGAVPAKDVYYATKKNCKH-KKHYRSSRTAASNI 201


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