BLASTX nr result
ID: Catharanthus23_contig00025718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025718
(421 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3... 62 1e-07
ref|XP_003598436.1| hypothetical protein MTR_3g013690 [Medicago ... 61 1e-07
ref|XP_003598432.1| hypothetical protein MTR_3g013650 [Medicago ... 61 1e-07
ref|XP_003598431.1| 40S ribosomal protein S19-like protein [Medi... 61 1e-07
ref|XP_006412968.1| hypothetical protein EUTSA_v10027316mg, part... 61 2e-07
ref|XP_002319411.1| predicted protein [Populus trichocarpa] 60 2e-07
ref|XP_003593768.1| hypothetical protein MTR_2g015880 [Medicago ... 59 7e-07
ref|XP_002325648.2| hypothetical protein POPTR_0019s14920g [Popu... 59 7e-07
ref|XP_003612105.1| hypothetical protein MTR_5g021310 [Medicago ... 58 1e-06
ref|XP_003607464.1| hypothetical protein MTR_4g078300 [Medicago ... 58 1e-06
ref|XP_003623360.1| hypothetical protein MTR_7g069990 [Medicago ... 56 6e-06
>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
Oligoribonuclease [Medicago truncatula]
Length = 1551
Score = 61.6 bits (148), Expect = 1e-07
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = -1
Query: 118 QQHQWSSGRIVPCHGTDPGSIPGWC 44
++HQWSSGRIVPCHGTDPGSIPGWC
Sbjct: 4 KKHQWSSGRIVPCHGTDPGSIPGWC 28
Score = 58.9 bits (141), Expect = 7e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1
Query: 124 KYQQHQWSSGRIVPCHGTDPGSIPGW 47
K +HQWSSGRIVPCHGTDPGSIPGW
Sbjct: 599 KNMKHQWSSGRIVPCHGTDPGSIPGW 624
>ref|XP_003598436.1| hypothetical protein MTR_3g013690 [Medicago truncatula]
gi|355487484|gb|AES68687.1| hypothetical protein
MTR_3g013690 [Medicago truncatula]
Length = 209
Score = 61.2 bits (147), Expect = 1e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -1
Query: 115 QHQWSSGRIVPCHGTDPGSIPGWC 44
+HQWSSGRIVPCHGTDPGSIPGWC
Sbjct: 30 KHQWSSGRIVPCHGTDPGSIPGWC 53
>ref|XP_003598432.1| hypothetical protein MTR_3g013650 [Medicago truncatula]
gi|355487480|gb|AES68683.1| hypothetical protein
MTR_3g013650 [Medicago truncatula]
Length = 288
Score = 61.2 bits (147), Expect = 1e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -1
Query: 115 QHQWSSGRIVPCHGTDPGSIPGWC 44
+HQWSSGRIVPCHGTDPGSIPGWC
Sbjct: 166 KHQWSSGRIVPCHGTDPGSIPGWC 189
>ref|XP_003598431.1| 40S ribosomal protein S19-like protein [Medicago truncatula]
gi|355487479|gb|AES68682.1| 40S ribosomal protein
S19-like protein [Medicago truncatula]
Length = 648
Score = 61.2 bits (147), Expect = 1e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -1
Query: 115 QHQWSSGRIVPCHGTDPGSIPGWC 44
+HQWSSGRIVPCHGTDPGSIPGWC
Sbjct: 198 KHQWSSGRIVPCHGTDPGSIPGWC 221
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = -1
Query: 112 HQWSSGRIVPCHGTDPGSIPGW 47
HQWSSGRIVPCHGTDPGSIPGW
Sbjct: 596 HQWSSGRIVPCHGTDPGSIPGW 617
>ref|XP_006412968.1| hypothetical protein EUTSA_v10027316mg, partial [Eutrema
salsugineum] gi|557114138|gb|ESQ54421.1| hypothetical
protein EUTSA_v10027316mg, partial [Eutrema salsugineum]
Length = 72
Score = 60.8 bits (146), Expect = 2e-07
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +3
Query: 39 EMHQPGIEPGSVPWQGTILPLDHWC 113
++HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 44 KLHQPGIEPGSVPWQGTILPLDHWC 68
>ref|XP_002319411.1| predicted protein [Populus trichocarpa]
Length = 75
Score = 60.5 bits (145), Expect = 2e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +3
Query: 42 MHQPGIEPGSVPWQGTILPLDHWC 113
+HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 44 LHQPGIEPGSVPWQGTILPLDHWC 67
>ref|XP_003593768.1| hypothetical protein MTR_2g015880 [Medicago truncatula]
gi|355482816|gb|AES64019.1| hypothetical protein
MTR_2g015880 [Medicago truncatula]
Length = 86
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 38 RNAPAGNRTRVCTVAGYYSTTRPLVLLI 121
RNAPAGNRTRVCTVAGYYSTTRPLVL++
Sbjct: 6 RNAPAGNRTRVCTVAGYYSTTRPLVLVV 33
>ref|XP_002325648.2| hypothetical protein POPTR_0019s14920g [Populus trichocarpa]
gi|550317590|gb|EEF00030.2| hypothetical protein
POPTR_0019s14920g [Populus trichocarpa]
Length = 85
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 36 KEMHQPGIEPGSVPWQGTILPLDHWCC*YLLM*KNFN 146
+++HQP IEPGSVPWQGTILPLDHWC L++ N N
Sbjct: 28 QDLHQPVIEPGSVPWQGTILPLDHWC--LLILFNNIN 62
>ref|XP_003612105.1| hypothetical protein MTR_5g021310 [Medicago truncatula]
gi|355513440|gb|AES95063.1| hypothetical protein
MTR_5g021310 [Medicago truncatula]
Length = 58
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 42 MHQPGIEPGSVPWQGTILPLDHW 110
MHQPGIEPGSVPWQGTILPLDHW
Sbjct: 1 MHQPGIEPGSVPWQGTILPLDHW 23
>ref|XP_003607464.1| hypothetical protein MTR_4g078300 [Medicago truncatula]
gi|355508519|gb|AES89661.1| hypothetical protein
MTR_4g078300 [Medicago truncatula]
Length = 90
Score = 57.8 bits (138), Expect = 1e-06
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1
Query: 115 QHQWSSGRIVPCHGTDPGSIPGW 47
+HQWSSGRIVPCHGTDPGSIPGW
Sbjct: 7 RHQWSSGRIVPCHGTDPGSIPGW 29
>ref|XP_003623360.1| hypothetical protein MTR_7g069990 [Medicago truncatula]
gi|355498375|gb|AES79578.1| hypothetical protein
MTR_7g069990 [Medicago truncatula]
Length = 75
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +2
Query: 44 APAGNRTRVCTVAGYYSTTRPLVLLIFINVKEF*LSLLKETEDFIQWPRDRPL 202
APAGNRTRVCTVAGYYSTTRPLVLL+ L + +++ PR +PL
Sbjct: 22 APAGNRTRVCTVAGYYSTTRPLVLLM----------LRRFYSTYLKHPRIQPL 64