BLASTX nr result

ID: Catharanthus23_contig00025678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025678
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB70512.1| Myb [Nicotiana tabacum]                                67   2e-09
ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like i...    63   4e-08
ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266...    56   6e-06

>dbj|BAB70512.1| Myb [Nicotiana tabacum]
          Length = 588

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
 Frame = +1

Query: 10  PFSSEWLFESPKRTRHDSLGFSNLNSEHSPDTNFLSLSTTHGYDKENSQVCKKNKVYKAP 189
           P +   ++ESPKR+RHD++        + P+ +FLSLS    + + +SQ  KKNK Y   
Sbjct: 365 PTTFRSMYESPKRSRHDTV--------NDPNCDFLSLSLA-SFTEVHSQSTKKNKAYDTQ 415

Query: 190 SSQDRGHTVFFHSEPSELKDFHVS------TRKDGGKVGN---FSSPPPNQMLNASRSDS 342
           SS         + EP +LKD  +       +R D  +  N   F S PP+  L  S + S
Sbjct: 416 SSLGLKQQGSLYYEPPQLKDMMIPLTDENLSRDDLIRQQNGHPFCSTPPSLKLTVSANGS 475

Query: 343 SPESILRNSA 372
           SPES+LRNSA
Sbjct: 476 SPESVLRNSA 485


>ref|XP_006358883.1| PREDICTED: transcription factor MYB28-like isoform X1 [Solanum
           tuberosum] gi|565386118|ref|XP_006358884.1| PREDICTED:
           transcription factor MYB28-like isoform X2 [Solanum
           tuberosum]
          Length = 586

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
 Frame = +1

Query: 10  PFSSEWLFESPKRTRHDSLGFSNLNSEHSPDTNFLSLSTTHGYDKENSQVCKKNKVYKAP 189
           P S   ++ESPKR+R+D++        + PD +FLSLS     +  +    KKNK Y   
Sbjct: 364 PTSFGSMYESPKRSRYDAV--------NDPDHDFLSLSLAAFTEVSHGN--KKNKTYDTQ 413

Query: 190 SSQDRGHTVFFHSEPSELKDFHVSTRKDGGKVGNF---------SSPPPNQMLNASRSDS 342
           SS         + EP ++KD  +S+  +     NF          S PP+  L  S + S
Sbjct: 414 SSLALNQPGRLYYEPPKVKDLMISSMDENLSKDNFIGQHHGHPLCSTPPSLKLTVSANGS 473

Query: 343 SPESILRNSA 372
           SPES+LRNSA
Sbjct: 474 SPESVLRNSA 483


>ref|XP_004245633.1| PREDICTED: uncharacterized protein LOC101266438 [Solanum
           lycopersicum]
          Length = 586

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
 Frame = +1

Query: 10  PFSSEWLFESPKRTRHDSLGFSNLNSEHSPDTNFLSLSTTHGYDKENSQVCKKNKVYKAP 189
           P S   ++ESPKR+R+D+         + PD +FLSLS       E S   KKN+ Y   
Sbjct: 364 PTSFGSMYESPKRSRYDAA--------NDPDHDFLSLSLAAF--TEVSYGNKKNRTYDTQ 413

Query: 190 SSQDRGHTVFFHSEPSELKDFHVSTRKDGGKVGNF---------SSPPPNQMLNASRSDS 342
            S           EP ++KD  +S+  +     NF          S PP+  L  S + S
Sbjct: 414 YSLALNQPGRLCYEPPKVKDLMISSMDEKLSKDNFIGQHHGHPLCSTPPSLKLTVSANGS 473

Query: 343 SPESILRNSA 372
           SPES+LRNSA
Sbjct: 474 SPESVLRNSA 483


Top