BLASTX nr result
ID: Catharanthus23_contig00025627
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025627
(285 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 111 9e-23
emb|CBI32841.3| unnamed protein product [Vitis vinifera] 111 9e-23
gb|EOY19521.1| Global transcription factor group B1 isoform 1 [T... 109 3e-22
ref|XP_004493316.1| PREDICTED: transcription elongation factor S... 109 4e-22
ref|XP_004493315.1| PREDICTED: transcription elongation factor S... 109 4e-22
ref|XP_004493314.1| PREDICTED: transcription elongation factor S... 109 4e-22
ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis... 107 1e-21
ref|XP_004164643.1| PREDICTED: transcription elongation factor S... 105 8e-21
ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, part... 103 2e-20
gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notab... 102 4e-20
ref|XP_004249330.1| PREDICTED: transcription elongation factor S... 102 4e-20
ref|XP_006604309.1| PREDICTED: transcription elongation factor S... 102 5e-20
ref|XP_006339249.1| PREDICTED: transcription elongation factor S... 102 7e-20
ref|XP_006339248.1| PREDICTED: transcription elongation factor S... 102 7e-20
ref|XP_003521098.1| PREDICTED: transcription elongation factor S... 101 9e-20
gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus pe... 100 2e-19
gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus... 100 2e-19
ref|XP_004152869.1| PREDICTED: transcription elongation factor S... 99 6e-19
ref|XP_006482016.1| PREDICTED: transcription elongation factor S... 98 1e-18
ref|XP_004309652.1| PREDICTED: transcription elongation factor S... 97 2e-18
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
Length = 1660
Score = 111 bits (278), Expect = 9e-23
Identities = 60/89 (67%), Positives = 67/89 (75%), Gaps = 11/89 (12%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSN--DGGWRGSQSSERG 208
RHIDD H+S PSIRSVA+MVPMRSPATGG SG GW GS+N +GGWRG QSS+R
Sbjct: 1428 RHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRG-QSSDRD 1486
Query: 209 R----GPRAGRSDYRNGDNQDGHPSGLPR 283
R G R GR+DYRNG +DGHPSGLPR
Sbjct: 1487 RSSTPGSRTGRNDYRNGGGRDGHPSGLPR 1515
>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 111 bits (278), Expect = 9e-23
Identities = 60/89 (67%), Positives = 67/89 (75%), Gaps = 11/89 (12%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSN--DGGWRGSQSSERG 208
RHIDD H+S PSIRSVA+MVPMRSPATGG SG GW GS+N +GGWRG QSS+R
Sbjct: 1414 RHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRG-QSSDRD 1472
Query: 209 R----GPRAGRSDYRNGDNQDGHPSGLPR 283
R G R GR+DYRNG +DGHPSGLPR
Sbjct: 1473 RSSTPGSRTGRNDYRNGGGRDGHPSGLPR 1501
>gb|EOY19521.1| Global transcription factor group B1 isoform 1 [Theobroma cacao]
Length = 1617
Score = 109 bits (273), Expect = 3e-22
Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSNDGGWRGSQSSERGR- 211
RHIDD H+S PSIRSVA+MVPMRSPA+GG +G GW GS+N+GGWRG S +RG+
Sbjct: 1419 RHIDDPQHESAPSIRSVAAMVPMRSPASGGSAGASMGSGWGGSTNEGGWRG-HSFDRGQS 1477
Query: 212 ---GPRAGRSDYRNGDNQDGHPSGLPR 283
G R GR+DYRN ++DGHPSGLPR
Sbjct: 1478 STPGSRTGRNDYRNSGSRDGHPSGLPR 1504
>ref|XP_004493316.1| PREDICTED: transcription elongation factor SPT6-like isoform X3
[Cicer arietinum]
Length = 1451
Score = 109 bits (272), Expect = 4e-22
Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSNDGGWRGSQSSERGR- 211
RHIDD +DSTPSIRSVA+MVPMRSPATGG SG GW GS+++GGWRG S +R R
Sbjct: 1246 RHIDDPQNDSTPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSNSEGGWRG-HSHDRDRS 1304
Query: 212 ---GPRAGRSDYRNGDNQDGHPSGLPR 283
G R GRSDYRN N+D HPSG+PR
Sbjct: 1305 STPGSRTGRSDYRNNGNRDEHPSGVPR 1331
>ref|XP_004493315.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Cicer arietinum]
Length = 1641
Score = 109 bits (272), Expect = 4e-22
Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSNDGGWRGSQSSERGR- 211
RHIDD +DSTPSIRSVA+MVPMRSPATGG SG GW GS+++GGWRG S +R R
Sbjct: 1436 RHIDDPQNDSTPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSNSEGGWRG-HSHDRDRS 1494
Query: 212 ---GPRAGRSDYRNGDNQDGHPSGLPR 283
G R GRSDYRN N+D HPSG+PR
Sbjct: 1495 STPGSRTGRSDYRNNGNRDEHPSGVPR 1521
>ref|XP_004493314.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Cicer arietinum]
Length = 1639
Score = 109 bits (272), Expect = 4e-22
Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSNDGGWRGSQSSERGR- 211
RHIDD +DSTPSIRSVA+MVPMRSPATGG SG GW GS+++GGWRG S +R R
Sbjct: 1434 RHIDDPQNDSTPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSNSEGGWRG-HSHDRDRS 1492
Query: 212 ---GPRAGRSDYRNGDNQDGHPSGLPR 283
G R GRSDYRN N+D HPSG+PR
Sbjct: 1493 STPGSRTGRSDYRNNGNRDEHPSGVPR 1519
>ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
gi|223536178|gb|EEF37832.1| suppressor of ty, putative
[Ricinus communis]
Length = 1650
Score = 107 bits (268), Expect = 1e-21
Identities = 56/87 (64%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSNDGGWRGSQSSER--- 205
RHIDD HD+ PSIRSVA+MVPMRSPATGG SG GW GS+NDG WR +QS +R
Sbjct: 1433 RHIDDPMHDAAPSIRSVAAMVPMRSPATGGSSGASMGSGWGGSTNDGSWR-AQSFDRDRS 1491
Query: 206 -GRGPRAGRSDYRNGDNQDGHPSGLPR 283
G G R GR+DYR+G N+D H SGLPR
Sbjct: 1492 SGPGSRTGRNDYRSGSNRDSHQSGLPR 1518
>ref|XP_004164643.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
sativus]
Length = 482
Score = 105 bits (261), Expect = 8e-21
Identities = 56/87 (64%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSGG-----WCGSSNDGGWRGSQSSERGR- 211
RHIDD HDS PSIRSVA+MVPMRSPATGG S W GSS++GGWR SQS +R R
Sbjct: 264 RHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSSHEGGWR-SQSFDRDRS 322
Query: 212 ---GPRAGRSDYRNGDNQDGHPSGLPR 283
G R GR+D RN +DGHPSGLPR
Sbjct: 323 STPGSRTGRNDNRNSSGRDGHPSGLPR 349
>ref|XP_006430480.1| hypothetical protein CICLE_v10013566mg, partial [Citrus clementina]
gi|557532537|gb|ESR43720.1| hypothetical protein
CICLE_v10013566mg, partial [Citrus clementina]
Length = 1592
Score = 103 bits (257), Expect = 2e-20
Identities = 52/82 (63%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFS----GGWCGSSNDGGWRGSQSSERGRGP 217
RHIDD DS PSIRSVA+MVPMRSPA GG + GW GS+N+GGW +SS G
Sbjct: 1399 RHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTNEGGWNRDRSST--PGS 1456
Query: 218 RAGRSDYRNGDNQDGHPSGLPR 283
R GR+DYRNG +DGHPSGLPR
Sbjct: 1457 RTGRNDYRNGGGRDGHPSGLPR 1478
>gb|EXC30727.1| Transcription elongation factor SPT6 [Morus notabilis]
Length = 1638
Score = 102 bits (255), Expect = 4e-20
Identities = 56/88 (63%), Positives = 62/88 (70%), Gaps = 10/88 (11%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSNDGGWRGSQSSERGR- 211
RHIDD HDS PSIRSVA+MVPMRSPA GG SG GW GS+NDG WRG QS +R R
Sbjct: 1421 RHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGSTNDGSWRG-QSFDRERS 1479
Query: 212 ---GPRAGRSDYRN-GDNQDGHPSGLPR 283
G R GR+D+RN G + GHPSG PR
Sbjct: 1480 STPGSRTGRNDFRNGGGGRGGHPSGAPR 1507
>ref|XP_004249330.1| PREDICTED: transcription elongation factor SPT6-like [Solanum
lycopersicum]
Length = 1642
Score = 102 bits (255), Expect = 4e-20
Identities = 58/84 (69%), Positives = 63/84 (75%), Gaps = 7/84 (8%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG---GWCGSSNDGGWRGSQSSER----G 208
RHIDD PHDS PSIRSVA+MVPMRSPA+GG SG GW GSSND G RG QS +R G
Sbjct: 1445 RHIDD-PHDSGPSIRSVAAMVPMRSPASGGSSGFGSGWGGSSNDSGRRGGQSGDRDRSYG 1503
Query: 209 RGPRAGRSDYRNGDNQDGHPSGLP 280
G RAGR+DYRN +NQD SGLP
Sbjct: 1504 SGSRAGRNDYRNRNNQDDQ-SGLP 1526
>ref|XP_006604309.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Glycine max]
Length = 1649
Score = 102 bits (254), Expect = 5e-20
Identities = 55/89 (61%), Positives = 62/89 (69%), Gaps = 11/89 (12%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSN-DGGWRGSQSSERG- 208
RHIDD HDS PSIRSV++MVPMRSPATGG SG GW G SN +GGWRG S +RG
Sbjct: 1435 RHIDDPQHDSAPSIRSVSAMVPMRSPATGGSSGASGGSGWGGGSNSEGGWRG-HSYDRGD 1493
Query: 209 ----RGPRAGRSDYRNGDNQDGHPSGLPR 283
G + GR +YRN NQD HPSG+PR
Sbjct: 1494 RSSTPGSKTGRGEYRNNGNQDEHPSGVPR 1522
>ref|XP_006339249.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
[Solanum tuberosum]
Length = 1642
Score = 102 bits (253), Expect = 7e-20
Identities = 57/84 (67%), Positives = 61/84 (72%), Gaps = 7/84 (8%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATG---GFSGGWCGSSNDGGWRGSQSSER----G 208
RHIDD PHDS PSIRSVA+MVPMRSPA+G GF GGW GSSND G RG QS +R G
Sbjct: 1448 RHIDD-PHDSGPSIRSVAAMVPMRSPASGGSSGFGGGWGGSSNDSGRRGGQSGDRDRSSG 1506
Query: 209 RGPRAGRSDYRNGDNQDGHPSGLP 280
G R GR+DYRN NQD SGLP
Sbjct: 1507 SGSRPGRNDYRNRSNQDDQ-SGLP 1529
>ref|XP_006339248.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
[Solanum tuberosum]
Length = 1643
Score = 102 bits (253), Expect = 7e-20
Identities = 57/84 (67%), Positives = 61/84 (72%), Gaps = 7/84 (8%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATG---GFSGGWCGSSNDGGWRGSQSSER----G 208
RHIDD PHDS PSIRSVA+MVPMRSPA+G GF GGW GSSND G RG QS +R G
Sbjct: 1449 RHIDD-PHDSGPSIRSVAAMVPMRSPASGGSSGFGGGWGGSSNDSGRRGGQSGDRDRSSG 1507
Query: 209 RGPRAGRSDYRNGDNQDGHPSGLP 280
G R GR+DYRN NQD SGLP
Sbjct: 1508 SGSRPGRNDYRNRSNQDDQ-SGLP 1530
>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1663
Score = 101 bits (252), Expect = 9e-20
Identities = 56/90 (62%), Positives = 60/90 (66%), Gaps = 12/90 (13%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSND--GGWRGSQSSERG 208
RHIDD HDS PSIRSVA+MVPMRSPA GG SG GW G SN GGWRG S +RG
Sbjct: 1434 RHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGGSNSEGGGWRG-HSYDRG 1492
Query: 209 -----RGPRAGRSDYRNGDNQDGHPSGLPR 283
G R GR +YRN NQD HPSG+PR
Sbjct: 1493 DRSSTPGSRTGRGEYRNNGNQDEHPSGVPR 1522
>gb|EMJ05505.1| hypothetical protein PRUPE_ppa000164mg [Prunus persica]
Length = 1553
Score = 100 bits (250), Expect = 2e-19
Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSGGWCGSSNDGGWRGSQSSERGR----GP 217
RHIDD H+S PSIRSVA+MVPMRSPATG GS+N+GGWRG QS +R R
Sbjct: 1342 RHIDDPQHESGPSIRSVAAMVPMRSPATG-------GSTNEGGWRG-QSFDRDRSSTPSS 1393
Query: 218 RAGRSDYRNGDNQDGHPSGLPR 283
R GR+DYRNG ++DGHPSGLPR
Sbjct: 1394 RTGRNDYRNGGSRDGHPSGLPR 1415
>gb|ESW34019.1| hypothetical protein PHAVU_001G117200g [Phaseolus vulgaris]
Length = 1679
Score = 100 bits (249), Expect = 2e-19
Identities = 53/87 (60%), Positives = 57/87 (65%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFS-----GGWCGSSNDGGWRGSQSSERGR- 211
RHIDD HDS PSIRSVA+MVPMRSPA GG S GGW G SN G R S +R R
Sbjct: 1430 RHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGPSVGGGWGGGSNSEGGRRGHSYDRDRS 1489
Query: 212 ---GPRAGRSDYRNGDNQDGHPSGLPR 283
G R GR +YRN NQD HPSG+PR
Sbjct: 1490 STPGSRTGRGEYRNNGNQDEHPSGVPR 1516
>ref|XP_004152869.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
sativus]
Length = 1631
Score = 99.0 bits (245), Expect = 6e-19
Identities = 56/92 (60%), Positives = 62/92 (67%), Gaps = 14/92 (15%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSGG-----WCGSSNDGGWRGSQSSERGR- 211
RHIDD HDS PSIRSVA+MVPMRSPATGG S W GSS++GGWR SQS +R R
Sbjct: 1413 RHIDDPQHDSAPSIRSVAAMVPMRSPATGGSSAASAGSPWGGSSHEGGWR-SQSFDRDRS 1471
Query: 212 ---GPRAG-----RSDYRNGDNQDGHPSGLPR 283
G R G R+D RN +DGHPSGLPR
Sbjct: 1472 STPGSRTGEIYKRRNDNRNSSGRDGHPSGLPR 1503
>ref|XP_006482016.1| PREDICTED: transcription elongation factor SPT6-like [Citrus
sinensis]
Length = 1623
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/82 (63%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFS----GGWCGSSNDGGWRGSQSSERGRGP 217
RHIDD DS PSIRSVA+MVPMRSPA GG + GW GS+ND GW +SS G
Sbjct: 1431 RHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGSTND-GWNRDRSST--PGS 1487
Query: 218 RAGRSDYRNGDNQDGHPSGLPR 283
R GR+DYRNG +DGHPSGLPR
Sbjct: 1488 RTGRNDYRNGGGRDGHPSGLPR 1509
>ref|XP_004309652.1| PREDICTED: transcription elongation factor SPT6-like [Fragaria vesca
subsp. vesca]
Length = 1620
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/87 (58%), Positives = 61/87 (70%), Gaps = 9/87 (10%)
Frame = +2
Query: 50 RHIDDDPHDSTPSIRSVASMVPMRSPATGGFSG-----GWCGSSNDGGWRGSQSSERGR- 211
++ID+ H+S SIRSVA+MVPMRSPAT G SG GW G +N+GGW G QS +R R
Sbjct: 1412 KYIDEPQHESGQSIRSVAAMVPMRSPATAGSSGASAGSGWGGINNEGGWSG-QSFDRDRS 1470
Query: 212 ---GPRAGRSDYRNGDNQDGHPSGLPR 283
R GR+DYRNG +DGHPSGLPR
Sbjct: 1471 STPSSRTGRNDYRNGGGRDGHPSGLPR 1497