BLASTX nr result
ID: Catharanthus23_contig00025561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025561
(450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356982.1| PREDICTED: F-box/kelch-repeat protein At3g06... 66 7e-13
ref|XP_006356978.1| PREDICTED: F-box/kelch-repeat protein At3g06... 63 4e-11
ref|XP_006356975.1| PREDICTED: F-box/kelch-repeat protein At3g06... 62 2e-09
gb|EMJ15942.1| hypothetical protein PRUPE_ppa025191mg [Prunus pe... 67 2e-09
gb|EMJ16003.1| hypothetical protein PRUPE_ppa017841m1g, partial ... 64 3e-09
ref|XP_004309108.1| PREDICTED: F-box/kelch-repeat protein At3g06... 63 3e-08
ref|XP_004309109.1| PREDICTED: F-box/kelch-repeat protein At3g06... 62 1e-07
ref|XP_004502821.1| PREDICTED: putative F-box protein At3g16210-... 61 1e-07
ref|XP_006358425.1| PREDICTED: F-box/kelch-repeat protein At3g23... 61 2e-07
ref|XP_004486107.1| PREDICTED: F-box/kelch-repeat protein At3g23... 61 2e-07
gb|EMT27382.1| hypothetical protein F775_22235 [Aegilops tauschii] 61 2e-07
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|5... 60 2e-07
gb|ESW19807.1| hypothetical protein PHAVU_006G157000g [Phaseolus... 60 3e-07
gb|EOY05504.1| F-box and associated interaction domains-containi... 60 3e-07
ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|5... 60 3e-07
ref|XP_006349814.1| PREDICTED: F-box/kelch-repeat protein At3g06... 60 4e-07
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23... 59 5e-07
ref|XP_004299865.1| PREDICTED: F-box/kelch-repeat protein At3g06... 59 7e-07
ref|XP_004299864.1| PREDICTED: F-box/kelch-repeat protein At3g06... 59 7e-07
ref|XP_003598457.1| F-box/kelch-repeat protein [Medicago truncat... 59 7e-07
>ref|XP_006356982.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
tuberosum]
Length = 368
Score = 66.2 bits (160), Expect(2) = 7e-13
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Frame = +1
Query: 151 LPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSH----------QSH 300
LPEELI DIL RLP KSIG+ RCVS+ WR L P+F+K HFN H + H
Sbjct: 9 LPEELIVDILYRLPVKSIGRCRCVSKHWRNFLSHPQFIKLHFNLHVHTQEEKFIIITRQH 68
Query: 301 DLEKLPFAIFLP 336
+L + F +P
Sbjct: 69 ELHTITFNHHIP 80
Score = 32.7 bits (73), Expect(2) = 7e-13
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 381 VLRKLNLSRGQDNWVSVVGSCNG 449
+ RK+N + NW+SV GSCNG
Sbjct: 88 ISRKVNFQQLSHNWISVAGSCNG 110
>ref|XP_006356978.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
tuberosum]
Length = 373
Score = 62.8 bits (151), Expect(2) = 4e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 151 LPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQSHD 303
LPEELI++I RLP KSIG+ RC+S+ WR L P+F+K HFN +H +
Sbjct: 9 LPEELISEIFYRLPVKSIGRCRCLSKHWRNFLSHPQFIKLHFNLHAHTQEE 59
Score = 30.4 bits (67), Expect(2) = 4e-11
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 390 KLNLSRGQDNWVSVVGSCNG 449
K+N + NW+SV GSCNG
Sbjct: 91 KVNFQQLTQNWISVAGSCNG 110
>ref|XP_006356975.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
tuberosum]
Length = 364
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 151 LPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQ 294
LP+++I DILSRLPAKSIGQ RCVS W L P+F+K HF +H+
Sbjct: 7 LPQDIIIDILSRLPAKSIGQYRCVSNQWYNFLSHPQFIKFHFTLHAHK 54
Score = 25.0 bits (53), Expect(2) = 2e-09
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 411 QDNWVSVVGSCNG 449
Q+NW+S+ SCNG
Sbjct: 92 QNNWLSIACSCNG 104
>gb|EMJ15942.1| hypothetical protein PRUPE_ppa025191mg [Prunus persica]
Length = 385
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = +1
Query: 151 LPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLS 288
LP ELI +ILS LP KS+G+ RCVS+PW AL+ DP F+K HFN+ S
Sbjct: 29 LPWELIVEILSWLPVKSLGRFRCVSKPWNALIADPNFIKMHFNKTS 74
>gb|EMJ16003.1| hypothetical protein PRUPE_ppa017841m1g, partial [Prunus persica]
Length = 137
Score = 64.3 bits (155), Expect(2) = 3e-09
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Frame = +1
Query: 142 IARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQ-----SHDL 306
+A E++I DIL RLP KS+G+ RCVS+ W L P F++THFNR Q SH L
Sbjct: 1 MANFSEDIIADILFRLPVKSVGRFRCVSKSWLHLTTQPHFIQTHFNRTQTQKLILSSHSL 60
Query: 307 -----------EKLPFAIFLPLSVHPNFLW 363
+ LP + PL+ H W
Sbjct: 61 FSLDHLATIDDDMLPLELDFPLNTHLKTKW 90
Score = 22.3 bits (46), Expect(2) = 3e-09
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 420 WVSVVGSCNG 449
WV V GSCNG
Sbjct: 90 WVLVSGSCNG 99
>ref|XP_004309108.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
vesca subsp. vesca]
Length = 379
Score = 63.2 bits (152), Expect = 3e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 139 AIARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHF 276
A+A LPEE+I I++RLP KS+G+ RCVS WR+L DP F K+HF
Sbjct: 3 AVAFLPEEIILQIVTRLPVKSVGRCRCVSTRWRSLFSDPHFAKSHF 48
>ref|XP_004309109.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
vesca subsp. vesca]
Length = 375
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 139 AIARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHF 276
A A LPEE+I +I++RLP KS+G+ RCVS WR+L DP F K+HF
Sbjct: 3 ANAFLPEEIILEIVARLPVKSVGRCRCVSTRWRSLFSDPHFAKSHF 48
>ref|XP_004502821.1| PREDICTED: putative F-box protein At3g16210-like [Cicer arietinum]
Length = 408
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/91 (41%), Positives = 49/91 (53%)
Frame = +1
Query: 82 TPLPKSISSGTPVQFRVAMAIARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEF 261
TP P S+ TPV A+LPE LI +IL RLP K++ Q +CV + W LL DP F
Sbjct: 7 TPTPSSL---TPVP-------AQLPEVLIAEILKRLPVKTLVQFKCVCKSWHKLLTDPIF 56
Query: 262 VKTHFNRLSHQSHDLEKLPFAIFLPLSVHPN 354
TH + + L + F FL L +HPN
Sbjct: 57 TNTHLHFTTPTRIILSRY-FKSFLSLPLHPN 86
>ref|XP_006358425.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
tuberosum]
Length = 378
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +1
Query: 139 AIARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFN 279
+I LPEEL+T+ILSRLP KS+ + CVS+ W AL+ PEFVKTH +
Sbjct: 4 SIPVLPEELVTEILSRLPVKSLLKFMCVSKSWLALISSPEFVKTHLS 50
>ref|XP_004486107.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cicer
arietinum]
Length = 405
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +1
Query: 82 TPLPKSISSGTPVQFRVAMAIARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEF 261
TP SI+ G ++ LP EL+ +ILSRLP K + Q RCV + W++L+CDP+F
Sbjct: 33 TPPSSSITPGD--------SLPTLPFELVAEILSRLPVKILMQLRCVCKSWKSLICDPKF 84
Query: 262 VKTHFNRLSHQSHDL 306
VK H R+S H L
Sbjct: 85 VKKHL-RVSTTRHHL 98
>gb|EMT27382.1| hypothetical protein F775_22235 [Aegilops tauschii]
Length = 376
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +1
Query: 91 PKSISSGTPVQFRVAMAIARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKT 270
P ++ TP A LP+++++DILSRLP KS+ + RCV R WRA++ DP F
Sbjct: 15 PPPAATSTPAPATTDAAAVSLPDDVVSDILSRLPVKSVSRLRCVCRGWRAIVSDPGFAAL 74
Query: 271 HFNR 282
H +R
Sbjct: 75 HRSR 78
>ref|XP_002328907.1| predicted protein [Populus trichocarpa]
gi|566212205|ref|XP_006373085.1| hypothetical protein
POPTR_0017s08560g [Populus trichocarpa]
gi|550319791|gb|ERP50882.1| hypothetical protein
POPTR_0017s08560g [Populus trichocarpa]
Length = 374
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +1
Query: 142 IARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQSHDLEKLPF 321
I +LP E+I++ILSRLP K + + +CVS+ WR+L+ PEFVK H R D +
Sbjct: 5 IPKLPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKR---TKEDTNANHY 61
Query: 322 AIFLPLSVH 348
IFL H
Sbjct: 62 KIFLSTDPH 70
>gb|ESW19807.1| hypothetical protein PHAVU_006G157000g [Phaseolus vulgaris]
Length = 410
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +1
Query: 58 LIREKNFGTPLPKSISSGTPVQFRVAMAIARLPEELITDILSRLPAKSIGQSRCVSRPWR 237
LI N +P P +S ++ + LP EL+ +ILSRLP KS+ Q RCV + W
Sbjct: 23 LINPMNRASPPPPPSNSVQNQAMSESLPLPFLPNELVVEILSRLPVKSLLQFRCVCKSWM 82
Query: 238 ALLCDPEFVKTHFNRLSHQSH 300
+L+ DP F+K H + + +H
Sbjct: 83 SLISDPYFMKKHLHLSTRSTH 103
>gb|EOY05504.1| F-box and associated interaction domains-containing-like protein
[Theobroma cacao]
Length = 202
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 151 LPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQSHDLEKLPFA-I 327
LP+E++ DIL RLPAKS+ + + VS+PW +L+ DP F ++H +R ++ SHD L +
Sbjct: 11 LPDEIVYDILPRLPAKSLQRFKLVSKPWGSLISDPNFAESHLHR-ANTSHDKNMLRVGQL 69
Query: 328 FLPLSVHPNF 357
L + HP F
Sbjct: 70 DLTMGSHPYF 79
>ref|XP_002328860.1| predicted protein [Populus trichocarpa]
gi|566212187|ref|XP_006373076.1| hypothetical protein
POPTR_0017s08480g [Populus trichocarpa]
gi|550319782|gb|ERP50873.1| hypothetical protein
POPTR_0017s08480g [Populus trichocarpa]
Length = 360
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = +1
Query: 142 IARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQSHDLEK 312
+++LP+E+I DIL+ LPAKS+ + +CV R WR+L+ DP+F K H R +H+ ++ +
Sbjct: 1 MSKLPQEIIVDILTYLPAKSLIKFKCVCRSWRSLISDPQFAKLHLKR-AHEDENINR 56
>ref|XP_006349814.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
tuberosum]
Length = 370
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = +1
Query: 151 LPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQ 294
LP+EL+ +I RLPAKSIGQ RCVS P +LL + +F+K+HF R+ Q
Sbjct: 9 LPQELLINIFCRLPAKSIGQLRCVSNPLNSLLSNKQFLKSHFTRIHFQ 56
>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X1
[Glycine max]
Length = 405
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Frame = +1
Query: 58 LIREKNFGTPLPKS-------ISSGTPVQFRVAMAIARLPEELITDILSRLPAKSIGQSR 216
LI + +PLP S +S P+ F LP+EL+ +ILSRLP KS+ Q R
Sbjct: 19 LINPMDRTSPLPPSSVQKQQGMSESLPLPF--------LPDELVVEILSRLPVKSLLQFR 70
Query: 217 CVSRPWRALLCDPEFVKTHFNRLSHQSH 300
CV + W +L+ DP F+K H + S +H
Sbjct: 71 CVCKSWMSLIYDPYFMKKHLHLSSRSTH 98
>ref|XP_004299865.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 439
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 148 RLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQSH 300
RLP E+I +IL LP KS+ + RCVS+ W L+ DP+FVK HFN+ H
Sbjct: 22 RLPSEIIPEILLWLPVKSLCRFRCVSKSWLLLILDPKFVKNHFNKAIEHEH 72
>ref|XP_004299864.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 463
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 148 RLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQSH 300
RLP E+I +IL LP KS+ + RCVS+ W L+ DP+FVK HFN+ H
Sbjct: 22 RLPSEIIPEILLWLPVKSLCRFRCVSKSWLLLILDPKFVKNHFNKAIEHEH 72
>ref|XP_003598457.1| F-box/kelch-repeat protein [Medicago truncatula]
gi|355487505|gb|AES68708.1| F-box/kelch-repeat protein
[Medicago truncatula]
Length = 391
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 136 MAIARLPEELITDILSRLPAKSIGQSRCVSRPWRALLCDPEFVKTHFNRLSHQSHDLEKL 315
M+++ L ELI DIL RLP K + + +CVS+ + +L+ DPEF K H RL SH L L
Sbjct: 1 MSLSILLPELIDDILLRLPQKPLARFKCVSKHYNSLISDPEFTKLHLQRLPKISHTLISL 60
Query: 316 PFA---IFLPLSVH 348
A + P SVH
Sbjct: 61 EEANTWVITPNSVH 74