BLASTX nr result

ID: Catharanthus23_contig00025517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025517
         (493 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44984.1| unknown [Medicago truncatula]                           79   8e-13
ref|XP_002535497.1| conserved hypothetical protein [Ricinus comm...    61   8e-13
ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana] ...    72   8e-11
ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arab...    69   5e-10
ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citr...    49   5e-08
emb|CBI26620.3| unnamed protein product [Vitis vinifera]               62   1e-07

>gb|AFK44984.1| unknown [Medicago truncatula]
          Length = 63

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 43/63 (68%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
 Frame = -2

Query: 342 MVIRVSKGRTRWIFVVPTILLVPSPIRKGVIY---NKVCVLLIPRCSASSPMLPIGTSGV 172
           MVI VSK RTRW+F+VPTIL+ P P +KG IY       VLLIP+ SASSPM PIGTSGV
Sbjct: 1   MVIWVSKIRTRWMFIVPTILVSPDPHKKGRIYFFLQSFLVLLIPKRSASSPMPPIGTSGV 60

Query: 171 GLT 163
           GLT
Sbjct: 61  GLT 63


>ref|XP_002535497.1| conserved hypothetical protein [Ricinus communis]
           gi|223522895|gb|EEF26886.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 110

 Score = 60.8 bits (146), Expect(3) = 8e-13
 Identities = 35/52 (67%), Positives = 37/52 (71%)
 Frame = +2

Query: 107 SIVDSSIQRKVTPRGSVLWVNPTPLVPIGSIGEEALHLGINNTQTLL*ITPF 262
           SIVDSSI+RKV         NPTPLVPIG I EEAL LGINNT+ LL I PF
Sbjct: 62  SIVDSSIERKV---------NPTPLVPIGGIKEEALRLGINNTKPLLEIFPF 104



 Score = 36.2 bits (82), Expect(3) = 8e-13
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +3

Query: 33  EGEAWK*NNSFCRVSSTNATSDA 101
           +GE +K NNSFCRVS  NA SDA
Sbjct: 39  DGEVYKENNSFCRVSPINAASDA 61



 Score = 21.6 bits (44), Expect(3) = 8e-13
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 253 YPLPYWARD 279
           +P PYW RD
Sbjct: 102 FPFPYWDRD 110


>ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251116|gb|AEC06210.1| uncharacterized protein
           AT2G12905 [Arabidopsis thaliana]
          Length = 72

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
 Frame = +1

Query: 184 TNRQHRGRSTTPRNQQYANFVINYPLPYW----ARD*KNGWDNKYPSRSSFGYSYNH 342
           TNR+HRGRSTTPRNQQ+ NF+ N  L ++        +NGW+NK+PSRS FGY YNH
Sbjct: 16  TNRRHRGRSTTPRNQQHKNFLKNDSLSFFFFVGIGTNQNGWNNKHPSRSYFGYPYNH 72


>ref|XP_002886888.1| hypothetical protein ARALYDRAFT_475597 [Arabidopsis lyrata subsp.
           lyrata] gi|297332729|gb|EFH63147.1| hypothetical protein
           ARALYDRAFT_475597 [Arabidopsis lyrata subsp. lyrata]
          Length = 60

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 4/56 (7%)
 Frame = -2

Query: 342 MVIRVSKGRTRWIFVVPTILLVPSP----IRKGVIYNKVCVLLIPRCSASSPMLPI 187
           MVIRVSK RTRW+F+VPT+L+ P+P     RKG+I+ KV VLLI R SASSPM PI
Sbjct: 1   MVIRVSKVRTRWMFIVPTMLISPNPNEEEERKGIIFKKVFVLLISRRSASSPMPPI 56


>ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citrus clementina]
           gi|557547807|gb|ESR58767.1| hypothetical protein
           CICLE_v10004111mg [Citrus clementina]
          Length = 58

 Score = 48.5 bits (114), Expect(2) = 5e-08
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = +1

Query: 283 KNGWDNKYPSRSSFGYSYNHRRLL 354
           KNGWDNK+PSRS  GY YNHRRLL
Sbjct: 34  KNGWDNKHPSRSYCGYPYNHRRLL 57



 Score = 34.3 bits (77), Expect(2) = 5e-08
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +3

Query: 216 T*ESTIRKLCYKLPPSLLGSGLKE 287
           T ES  RKLCYKLPP L G G K+
Sbjct: 11  TPESATRKLCYKLPPFLSGIGTKK 34


>emb|CBI26620.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -2

Query: 255 VIYNKVCVLLIPRCSASSPMLPIGTSGVGLTHNTEPLGV 139
           VIYNKV VLLIPRCSASSP+  IGTSGVGLT N E +G+
Sbjct: 405 VIYNKVFVLLIPRCSASSPISTIGTSGVGLTSNIEHIGI 443


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