BLASTX nr result
ID: Catharanthus23_contig00024439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00024439
(578 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s... 311 1e-82
gb|EOY22974.1| Cleavage and polyadenylation specificity factor 1... 301 6e-80
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 301 6e-80
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 301 6e-80
gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus pe... 301 8e-80
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec... 294 1e-77
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr... 292 4e-77
ref|XP_002510905.1| cleavage and polyadenylation specificity fac... 292 4e-77
ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arab... 292 5e-77
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ... 291 1e-76
ref|NP_199979.2| cleavage and polyadenylation specificity factor... 291 1e-76
gb|AAN41460.1| putative cleavage and polyadenylation specificity... 291 1e-76
ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Caps... 290 1e-76
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec... 289 4e-76
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec... 289 4e-76
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr... 289 4e-76
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr... 289 4e-76
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec... 289 4e-76
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 283 3e-74
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec... 283 3e-74
>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
notabilis]
Length = 1479
Score = 311 bits (796), Expect = 1e-82
Identities = 147/192 (76%), Positives = 178/192 (92%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
R+Q++ D+R S++P E+ RGG++ G+SGASLEL CHYRLHGNV+++AVLSSGG DG R+R
Sbjct: 73 RLQEEDDTRSSRAPAESRRGGLMDGLSGASLELVCHYRLHGNVQTIAVLSSGGGDGSRRR 132
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL+FQ+AKISVLEFDDSIHGLRTSSMHCFEGP+W++LKRGRE F+RGPLVKVDPQGR
Sbjct: 133 DSIILSFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWLYLKRGRESFARGPLVKVDPQGR 192
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
CAGVL Y +QMI+LKA++A SGLVGEE+A +GGAVSARI+SSYIINLRDLDMKH+KDF+
Sbjct: 193 CAGVLAYNIQMIMLKAAQAGSGLVGEEDALGSGGAVSARIESSYIINLRDLDMKHIKDFV 252
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 253 FVHGYIEPVMVI 264
>gb|EOY22974.1| Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 301 bits (772), Expect = 6e-80
Identities = 148/192 (77%), Positives = 172/192 (89%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ++ R++++ E RGGVL GVSG SLEL C+YRLHGNVESMAVLS GG DG R+R
Sbjct: 72 RVQEEG-RREARNSTEVKRGGVLDGVSGVSLELVCNYRLHGNVESMAVLSIGGGDGSRRR 130
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL F++AKISVLEFDDSIHGLRT+SMHCFEGP+W+HLKRGRE F+RGPLVKVDPQGR
Sbjct: 131 DSIILAFKDAKISVLEFDDSIHGLRTTSMHCFEGPEWLHLKRGRESFARGPLVKVDPQGR 190
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVY LQMIILKAS+A SG VGE++AF +GGAVSAR++SSYIINLRDLD+KH+KDFI
Sbjct: 191 CGGVLVYDLQMIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIINLRDLDVKHIKDFI 250
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 251 FVHGYIEPVMVI 262
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 301 bits (772), Expect = 6e-80
Identities = 148/192 (77%), Positives = 170/192 (88%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ+D DSR+S++ E RGGV+AG+SGA+LEL C YRLHGNVE+M VL SGG D R+R
Sbjct: 72 RVQED-DSRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSRRR 130
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL FQ+AKISVLEFDDSIHGLRTSSMHCFEGP+W HLKRG E F+RGPLVKVDPQGR
Sbjct: 131 DSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGPLVKVDPQGR 190
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C+GVLVYGLQMIILKAS+A GLVG+E A S+G AVSAR++SSY+I+LRDLDMKHVKDF
Sbjct: 191 CSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDLDMKHVKDFT 250
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 251 FVHGYIEPVMVI 262
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 301 bits (772), Expect = 6e-80
Identities = 148/192 (77%), Positives = 170/192 (88%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ+D DSR+S++ E RGGV+AG+SGA+LEL C YRLHGNVE+M VL SGG D R+R
Sbjct: 72 RVQED-DSRESRASAETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGGDNSRRR 130
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL FQ+AKISVLEFDDSIHGLRTSSMHCFEGP+W HLKRG E F+RGPLVKVDPQGR
Sbjct: 131 DSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGPLVKVDPQGR 190
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C+GVLVYGLQMIILKAS+A GLVG+E A S+G AVSAR++SSY+I+LRDLDMKHVKDF
Sbjct: 191 CSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDLDMKHVKDFT 250
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 251 FVHGYIEPVMVI 262
>gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 301 bits (771), Expect = 8e-80
Identities = 143/192 (74%), Positives = 172/192 (89%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ++ +R ++ E RGG++ GVSGASLEL CHYRLHGNV +MAVLSSGG DG R+R
Sbjct: 73 RVQEEDGTRGPRASGEPKRGGLMDGVSGASLELVCHYRLHGNVVTMAVLSSGGGDGSRRR 132
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIILTF++AKISVLEFDDSIHGLRTSSMHCFEGP+W+HL+RGRE F+RGPLVKVDPQGR
Sbjct: 133 DSIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFARGPLVKVDPQGR 192
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C +LVYGLQMIILKAS+ SGLVG++++F +GGA+S+RI+SSYI+NLRD+DMKHVKDF
Sbjct: 193 CGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISSRIESSYIVNLRDMDMKHVKDFT 252
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 253 FLHGYIEPVMVI 264
>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 294 bits (752), Expect = 1e-77
Identities = 142/184 (77%), Positives = 163/184 (88%)
Frame = +2
Query: 26 RDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQRDSIILTFQ 205
R+SKS E RGG++ GVSGASLEL CHYRLHGNVESMA+LSS G DG ++RDSIIL FQ
Sbjct: 78 RESKSSGEVRRGGIMDGVSGASLELVCHYRLHGNVESMAILSSRGGDGSKKRDSIILVFQ 137
Query: 206 EAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGRCAGVLVYG 385
EAKISVLEFDDS H LRTSSMHCF+GP W+HLKRGRE F+RGP+VKVDPQGRC GVLVYG
Sbjct: 138 EAKISVLEFDDSTHSLRTSSMHCFDGPQWLHLKRGRESFARGPVVKVDPQGRCGGVLVYG 197
Query: 386 LQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFIFINGYIEP 565
LQMIILKAS+A SGLV ++ AF GA+SAR++SSY+INLRDLD+KHVKDF+F++GYIEP
Sbjct: 198 LQMIILKASQAGSGLVVDDEAFGNTGAISARVESSYLINLRDLDVKHVKDFVFVHGYIEP 257
Query: 566 VMVI 577
VMVI
Sbjct: 258 VMVI 261
>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
gi|557103022|gb|ESQ43385.1| hypothetical protein
EUTSA_v10012441mg [Eutrema salsugineum]
Length = 1445
Score = 292 bits (748), Expect = 4e-77
Identities = 141/193 (73%), Positives = 170/193 (88%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 RVQDDAD-SRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQ 178
RVQ++ + S++ ++P RGGV+ GVSG SLEL CHYRLHGNVES+AVL GG + +
Sbjct: 74 RVQEEVNTSQEPRNPKLVRRGGVMEGVSGVSLELVCHYRLHGNVESLAVLPMGGGNSSKG 133
Query: 179 RDSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQG 358
RDSI+LTF++AKISVLEFDDSIHGLR +SMHCFEGPDW+HLKRGRE F+RGPLVKVDPQG
Sbjct: 134 RDSIVLTFRDAKISVLEFDDSIHGLRMNSMHCFEGPDWLHLKRGRESFARGPLVKVDPQG 193
Query: 359 RCAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDF 538
RC GVLVYGLQMIILKAS+A GLVG+++ FS+GG VSAR++SSYIINLRDL+MKHVKDF
Sbjct: 194 RCGGVLVYGLQMIILKASQAGFGLVGDDDPFSSGGTVSARVESSYIINLRDLEMKHVKDF 253
Query: 539 IFINGYIEPVMVI 577
+F++GYIEPV+VI
Sbjct: 254 VFLHGYIEPVIVI 266
>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 292 bits (748), Expect = 4e-77
Identities = 140/192 (72%), Positives = 170/192 (88%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ+D SR+S+S E RGG++ GVSGASLEL CHYRLHGNVESM VL + G D R+R
Sbjct: 73 RVQEDG-SRESRSSRETKRGGLMDGVSGASLELVCHYRLHGNVESMVVLPTEGGDSSRRR 131
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL F++AKISVLEFDDSIHGLRTSSMHCFEGP+W+HLKRGRE F+RGPL+KVDPQGR
Sbjct: 132 DSIILAFKDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFARGPLLKVDPQGR 191
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C G+LVY +QMIIL+A++A SGLVG+++A S+GG++SAR+ SSY+INLRD+DMKHVKDFI
Sbjct: 192 CGGILVYDMQMIILRAAQASSGLVGDDDALSSGGSISARVQSSYVINLRDMDMKHVKDFI 251
Query: 542 FINGYIEPVMVI 577
F++ YIEPV+VI
Sbjct: 252 FLHDYIEPVVVI 263
>ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
lyrata] gi|297309955|gb|EFH40379.1| hypothetical protein
ARALYDRAFT_495232 [Arabidopsis lyrata subsp. lyrata]
Length = 1444
Score = 292 bits (747), Expect = 5e-77
Identities = 140/192 (72%), Positives = 167/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
R Q++ ++++ + P RGGV+ GVSG SLEL CHYRLHGNVES+AVL GG + + R
Sbjct: 74 RAQEEGNTQELRIPKLVKRGGVMDGVSGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGR 133
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIILTF++AKISVLEFDDSIH LR +SMHCFEGPDW+HLKRGRE F RGPLVKVDPQGR
Sbjct: 134 DSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGR 193
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILKAS+ SGLVG+++AFS+GG VSAR++SSYIINLRDL+MKHVKDF+
Sbjct: 194 CGGVLVYGLQMIILKASQVGSGLVGDDDAFSSGGTVSARVESSYIINLRDLEMKHVKDFV 253
Query: 542 FINGYIEPVMVI 577
F++GYIEPV+VI
Sbjct: 254 FLHGYIEPVIVI 265
>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
[Arabidopsis thaliana]
Length = 1448
Score = 291 bits (744), Expect = 1e-76
Identities = 139/192 (72%), Positives = 167/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
R Q++ ++++ ++P A RGGV+ GV G SLEL CHYRLHGNVES+AVL GG + + R
Sbjct: 74 RAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGR 133
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIILTF++AKISVLEFDDSIH LR +SMHCFEGPDW+HLKRGRE F RGPLVKVDPQGR
Sbjct: 134 DSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGR 193
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILK S+ SGLVG+++AFS+GG VSAR++SSYIINLRDL+MKHVKDF+
Sbjct: 194 CGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYIINLRDLEMKHVKDFV 253
Query: 542 FINGYIEPVMVI 577
F++GYIEPV+VI
Sbjct: 254 FLHGYIEPVIVI 265
>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=AtCPSF160;
Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
cleavage and polyadenylation specificity factor subunit
1 [Arabidopsis thaliana]
Length = 1442
Score = 291 bits (744), Expect = 1e-76
Identities = 139/192 (72%), Positives = 167/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
R Q++ ++++ ++P A RGGV+ GV G SLEL CHYRLHGNVES+AVL GG + + R
Sbjct: 74 RAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGR 133
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIILTF++AKISVLEFDDSIH LR +SMHCFEGPDW+HLKRGRE F RGPLVKVDPQGR
Sbjct: 134 DSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGR 193
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILK S+ SGLVG+++AFS+GG VSAR++SSYIINLRDL+MKHVKDF+
Sbjct: 194 CGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYIINLRDLEMKHVKDFV 253
Query: 542 FINGYIEPVMVI 577
F++GYIEPV+VI
Sbjct: 254 FLHGYIEPVIVI 265
>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
subunit [Arabidopsis thaliana]
Length = 1442
Score = 291 bits (744), Expect = 1e-76
Identities = 139/192 (72%), Positives = 167/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
R Q++ ++++ ++P A RGGV+ GV G SLEL CHYRLHGNVES+AVL GG + + R
Sbjct: 74 RAQEEGNTQELRNPKLAKRGGVMDGVYGVSLELVCHYRLHGNVESIAVLPMGGGNSSKGR 133
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIILTF++AKISVLEFDDSIH LR +SMHCFEGPDW+HLKRGRE F RGPLVKVDPQGR
Sbjct: 134 DSIILTFRDAKISVLEFDDSIHSLRMTSMHCFEGPDWLHLKRGRESFPRGPLVKVDPQGR 193
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILK S+ SGLVG+++AFS+GG VSAR++SSYIINLRDL+MKHVKDF+
Sbjct: 194 CGGVLVYGLQMIILKTSQVGSGLVGDDDAFSSGGTVSARVESSYIINLRDLEMKHVKDFV 253
Query: 542 FINGYIEPVMVI 577
F++GYIEPV+VI
Sbjct: 254 FLHGYIEPVIVI 265
>ref|XP_006282172.1| hypothetical protein CARUB_v10028433mg [Capsella rubella]
gi|482550876|gb|EOA15070.1| hypothetical protein
CARUB_v10028433mg [Capsella rubella]
Length = 1447
Score = 290 bits (743), Expect = 1e-76
Identities = 137/193 (70%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEAL-RGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQ 178
R Q++ ++++ ++P + + RGGV+ G+SG SLEL CHYRLHGNVES+AVL GG + +
Sbjct: 76 RAQEEGNTQELRNPKQLVKRGGVMDGLSGVSLELVCHYRLHGNVESIAVLPMGGGNSSKG 135
Query: 179 RDSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQG 358
RDSI+LTF++AKISVLEFDDSIHGLR +SMHCFEGPDW+HLK+GRE F RGPLVKVDPQG
Sbjct: 136 RDSIVLTFRDAKISVLEFDDSIHGLRMTSMHCFEGPDWLHLKKGRESFPRGPLVKVDPQG 195
Query: 359 RCAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDF 538
RC GVLVYGLQM+ILKAS+ SGLVG+++AFS+GG VSAR++SSYIINLRDL+MKHVKDF
Sbjct: 196 RCGGVLVYGLQMVILKASQVGSGLVGDDDAFSSGGTVSARVESSYIINLRDLEMKHVKDF 255
Query: 539 IFINGYIEPVMVI 577
+F++GYIEPV+VI
Sbjct: 256 VFLHGYIEPVIVI 268
>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Citrus sinensis]
Length = 1457
Score = 289 bits (739), Expect = 4e-76
Identities = 140/192 (72%), Positives = 166/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ++ S++SK+ E R ++ G+S ASLEL CHYRLHGNVES+A+LS GG D R+R
Sbjct: 72 RVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRR 130
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL F++AKISVLEFDDSIHGLR +SMHCFE P+W+HLKRGRE F+RGPLVKVDPQGR
Sbjct: 131 DSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGR 190
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILKAS+ SGLVG+E+ F +GG SARI+SS++INLRDLDMKHVKDFI
Sbjct: 191 CGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFI 250
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 251 FVHGYIEPVMVI 262
>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Citrus sinensis]
Length = 1458
Score = 289 bits (739), Expect = 4e-76
Identities = 140/192 (72%), Positives = 166/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ++ S++SK+ E R ++ G+S ASLEL CHYRLHGNVES+A+LS GG D R+R
Sbjct: 72 RVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRR 130
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL F++AKISVLEFDDSIHGLR +SMHCFE P+W+HLKRGRE F+RGPLVKVDPQGR
Sbjct: 131 DSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGR 190
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILKAS+ SGLVG+E+ F +GG SARI+SS++INLRDLDMKHVKDFI
Sbjct: 191 CGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFI 250
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 251 FVHGYIEPVMVI 262
>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523633|gb|ESR35000.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1457
Score = 289 bits (739), Expect = 4e-76
Identities = 140/192 (72%), Positives = 166/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ++ S++SK+ E R ++ G+S ASLEL CHYRLHGNVES+A+LS GG D R+R
Sbjct: 72 RVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRR 130
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL F++AKISVLEFDDSIHGLR +SMHCFE P+W+HLKRGRE F+RGPLVKVDPQGR
Sbjct: 131 DSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGR 190
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILKAS+ SGLVG+E+ F +GG SARI+SS++INLRDLDMKHVKDFI
Sbjct: 191 CGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFI 250
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 251 FVHGYIEPVMVI 262
>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523632|gb|ESR34999.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1458
Score = 289 bits (739), Expect = 4e-76
Identities = 140/192 (72%), Positives = 166/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ++ S++SK+ E R ++ G+S ASLEL CHYRLHGNVES+A+LS GG D R+R
Sbjct: 72 RVQEEG-SKESKNSGETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGADNSRRR 130
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIIL F++AKISVLEFDDSIHGLR +SMHCFE P+W+HLKRGRE F+RGPLVKVDPQGR
Sbjct: 131 DSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVKVDPQGR 190
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVYGLQMIILKAS+ SGLVG+E+ F +GG SARI+SS++INLRDLDMKHVKDFI
Sbjct: 191 CGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMKHVKDFI 250
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 251 FVHGYIEPVMVI 262
>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Fragaria vesca subsp. vesca]
Length = 1439
Score = 289 bits (739), Expect = 4e-76
Identities = 136/192 (70%), Positives = 170/192 (88%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
RVQ+ +R S++ E+ RGG++ GV+GASLEL CHYRLHGNV +MAVLSSGG DG ++R
Sbjct: 73 RVQEQDTARGSRASGESKRGGLMDGVAGASLELVCHYRLHGNVMTMAVLSSGGGDGSKRR 132
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
D+IILTF++AKISVLEFDDSIHGLRTSSMHCFEGP+W+HL+RGRE F+RGP VKVDPQGR
Sbjct: 133 DAIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFARGPSVKVDPQGR 192
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVLVY LQ+IILKA++ GLVG+++ F++G A+SAR++SSYII+LRD+DMKHVKDF
Sbjct: 193 CGGVLVYDLQLIILKAAQGGYGLVGDDDGFASGAAISARVESSYIISLRDMDMKHVKDFT 252
Query: 542 FINGYIEPVMVI 577
F++GYIEPV+VI
Sbjct: 253 FVHGYIEPVLVI 264
>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 283 bits (723), Expect = 3e-74
Identities = 137/192 (71%), Positives = 168/192 (87%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
R+Q+D + K+ ++ RG +L G++GASLEL CHYRLHGNVE+MAVLS GG D R+R
Sbjct: 70 RLQED---QPPKAAADSRRGALLDGIAGASLELVCHYRLHGNVETMAVLSIGGGDVSRRR 126
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSI+LTF +AKISVLE+DDSIHGLRTSS+HCFEGP+W+HLKRGRE F+RGP+VKVDPQGR
Sbjct: 127 DSIMLTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVKVDPQGR 186
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVL+Y LQMIILKA++A SGLVGE++A + GAV+ARI+SSY+INLRDLDM+HVKDF
Sbjct: 187 CGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSYMINLRDLDMRHVKDFT 246
Query: 542 FINGYIEPVMVI 577
F++GYIEPVMVI
Sbjct: 247 FVHGYIEPVMVI 258
>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Glycine max]
Length = 1449
Score = 283 bits (723), Expect = 3e-74
Identities = 136/192 (70%), Positives = 167/192 (86%)
Frame = +2
Query: 2 RVQDDADSRDSKSPPEALRGGVLAGVSGASLELACHYRLHGNVESMAVLSSGGLDGGRQR 181
R+Q+D +D+ ++ RG +L G++GASLEL CHYRLHGNVE+MAVLS GG D R+R
Sbjct: 71 RLQEDQQPKDASD--DSRRGTLLDGIAGASLELECHYRLHGNVETMAVLSIGGGDVSRKR 128
Query: 182 DSIILTFQEAKISVLEFDDSIHGLRTSSMHCFEGPDWVHLKRGREIFSRGPLVKVDPQGR 361
DSIILTF +AKISVLE+DDSIHGLRTSS+HCFEGP+W+HLKRGRE F+RGP+VK+DPQGR
Sbjct: 129 DSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVKIDPQGR 188
Query: 362 CAGVLVYGLQMIILKASEAISGLVGEENAFSAGGAVSARIDSSYIINLRDLDMKHVKDFI 541
C GVL+Y LQMIILKA++ SGLVG+++AF + GAV+ARI+SSY+INLRDLDM+HVKDF
Sbjct: 189 CGGVLIYDLQMIILKATQVGSGLVGDDDAFGSSGAVAARIESSYMINLRDLDMRHVKDFT 248
Query: 542 FINGYIEPVMVI 577
F+ GYIEPVMVI
Sbjct: 249 FVYGYIEPVMVI 260