BLASTX nr result
ID: Catharanthus23_contig00024380
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00024380 (289 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527491.1| conserved hypothetical protein [Ricinus comm... 87 2e-15 emb|CBI30986.3| unnamed protein product [Vitis vinifera] 63 5e-08 ref|XP_002527490.1| conserved hypothetical protein [Ricinus comm... 47 2e-07 ref|XP_006306006.1| hypothetical protein CARUB_v10011286mg [Caps... 59 5e-07 >ref|XP_002527491.1| conserved hypothetical protein [Ricinus communis] gi|223533131|gb|EEF34889.1| conserved hypothetical protein [Ricinus communis] Length = 101 Score = 87.0 bits (214), Expect = 2e-15 Identities = 48/84 (57%), Positives = 55/84 (65%) Frame = -1 Query: 256 GLRQLRPVILPLQRAEGIRCSVKPASRIALLSKSRVAQGFRPSHTAQLPAWNGRAREMLH 77 GL + + VILPL RA G RCSVKPASR AL S+++V F H AQL AWNGRAR H Sbjct: 13 GLGRHQLVILPLPRAGGCRCSVKPASRCALRSRNQVTPAFAQGHIAQLSAWNGRARAQPH 72 Query: 76 *DQPFESAQCPNTLLPPLGLQAHA 5 +P Q P TL+P L LQAHA Sbjct: 73 QGRPTGPEQRPITLMPLLRLQAHA 96 >emb|CBI30986.3| unnamed protein product [Vitis vinifera] Length = 139 Score = 62.8 bits (151), Expect = 5e-08 Identities = 38/72 (52%), Positives = 42/72 (58%) Frame = +1 Query: 1 QQRGLVTQVGAIRCWDIGPTQMVGLSGAFLWPARSKRGVGPCDLGESPGPLGS*RGGQCV 180 Q R LVTQVGA R D+G + VG G WPARSK G GES G + GG V Sbjct: 9 QSRELVTQVGASRWADVGSVEQVGPDGVKCWPARSKLGDESRHPGESLGGVAPRVGGNRV 68 Query: 181 RLVSQSSEYLPL 216 LVSQSS +LPL Sbjct: 69 SLVSQSSVHLPL 80 >ref|XP_002527490.1| conserved hypothetical protein [Ricinus communis] gi|223533130|gb|EEF34888.1| conserved hypothetical protein [Ricinus communis] Length = 60 Score = 46.6 bits (109), Expect(2) = 2e-07 Identities = 23/37 (62%), Positives = 23/37 (62%) Frame = +2 Query: 146 GHSALREEGNA*GWFHRAANTFRSLQWKDNGSELPKA 256 G R EG A GWFHRAA T S QWKDNG LP A Sbjct: 21 GSMGPRAEGTALGWFHRAAITSLSWQWKDNGPVLPGA 57 Score = 34.3 bits (77), Expect(2) = 2e-07 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 Query: 88 LWPARSKRGVGPCDLGESPGPLG 156 +W ARSK V PC LGE PG +G Sbjct: 2 IWLARSKLRVDPCGLGEGPGSMG 24 >ref|XP_006306006.1| hypothetical protein CARUB_v10011286mg [Capsella rubella] gi|482574717|gb|EOA38904.1| hypothetical protein CARUB_v10011286mg [Capsella rubella] Length = 270 Score = 59.3 bits (142), Expect = 5e-07 Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +3 Query: 12 ACNPSGGNKVLGHWADSNG-WS*WSISLARPFQAGSWAV*LGRKPWATRLLERRAMREAG 188 AC+PSG NKV+ HW D G S W+I ++G + RR +REAG Sbjct: 201 ACDPSGDNKVMEHWVDLIGPGSGWAIYWPAHSKSG--------------VENRRRLREAG 246 Query: 189 FTEQRIPSALCSGRITGRSCLRPL 260 FTEQR P A GRITGR PL Sbjct: 247 FTEQRSPPAFDGGRITGRCLPSPL 270