BLASTX nr result

ID: Catharanthus23_contig00024380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00024380
         (289 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527491.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
emb|CBI30986.3| unnamed protein product [Vitis vinifera]               63   5e-08
ref|XP_002527490.1| conserved hypothetical protein [Ricinus comm...    47   2e-07
ref|XP_006306006.1| hypothetical protein CARUB_v10011286mg [Caps...    59   5e-07

>ref|XP_002527491.1| conserved hypothetical protein [Ricinus communis]
           gi|223533131|gb|EEF34889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 101

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 48/84 (57%), Positives = 55/84 (65%)
 Frame = -1

Query: 256 GLRQLRPVILPLQRAEGIRCSVKPASRIALLSKSRVAQGFRPSHTAQLPAWNGRAREMLH 77
           GL + + VILPL RA G RCSVKPASR AL S+++V   F   H AQL AWNGRAR   H
Sbjct: 13  GLGRHQLVILPLPRAGGCRCSVKPASRCALRSRNQVTPAFAQGHIAQLSAWNGRARAQPH 72

Query: 76  *DQPFESAQCPNTLLPPLGLQAHA 5
             +P    Q P TL+P L LQAHA
Sbjct: 73  QGRPTGPEQRPITLMPLLRLQAHA 96


>emb|CBI30986.3| unnamed protein product [Vitis vinifera]
          Length = 139

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/72 (52%), Positives = 42/72 (58%)
 Frame = +1

Query: 1   QQRGLVTQVGAIRCWDIGPTQMVGLSGAFLWPARSKRGVGPCDLGESPGPLGS*RGGQCV 180
           Q R LVTQVGA R  D+G  + VG  G   WPARSK G      GES G +    GG  V
Sbjct: 9   QSRELVTQVGASRWADVGSVEQVGPDGVKCWPARSKLGDESRHPGESLGGVAPRVGGNRV 68

Query: 181 RLVSQSSEYLPL 216
            LVSQSS +LPL
Sbjct: 69  SLVSQSSVHLPL 80


>ref|XP_002527490.1| conserved hypothetical protein [Ricinus communis]
           gi|223533130|gb|EEF34888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 23/37 (62%), Positives = 23/37 (62%)
 Frame = +2

Query: 146 GHSALREEGNA*GWFHRAANTFRSLQWKDNGSELPKA 256
           G    R EG A GWFHRAA T  S QWKDNG  LP A
Sbjct: 21  GSMGPRAEGTALGWFHRAAITSLSWQWKDNGPVLPGA 57



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1

Query: 88  LWPARSKRGVGPCDLGESPGPLG 156
           +W ARSK  V PC LGE PG +G
Sbjct: 2   IWLARSKLRVDPCGLGEGPGSMG 24


>ref|XP_006306006.1| hypothetical protein CARUB_v10011286mg [Capsella rubella]
           gi|482574717|gb|EOA38904.1| hypothetical protein
           CARUB_v10011286mg [Capsella rubella]
          Length = 270

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
 Frame = +3

Query: 12  ACNPSGGNKVLGHWADSNG-WS*WSISLARPFQAGSWAV*LGRKPWATRLLERRAMREAG 188
           AC+PSG NKV+ HW D  G  S W+I      ++G              +  RR +REAG
Sbjct: 201 ACDPSGDNKVMEHWVDLIGPGSGWAIYWPAHSKSG--------------VENRRRLREAG 246

Query: 189 FTEQRIPSALCSGRITGRSCLRPL 260
           FTEQR P A   GRITGR    PL
Sbjct: 247 FTEQRSPPAFDGGRITGRCLPSPL 270


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