BLASTX nr result
ID: Catharanthus23_contig00024352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00024352
(713 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 55 6e-16
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 69 1e-14
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 62 1e-13
ref|XP_003524766.2| PREDICTED: uncharacterized protein LOC100820... 57 2e-13
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 62 2e-13
gb|EOY03128.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 48 3e-12
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 55 4e-12
ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855... 55 4e-12
ref|XP_004289223.1| PREDICTED: uncharacterized protein LOC101293... 55 5e-12
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212... 53 6e-12
ref|XP_004234448.1| PREDICTED: uncharacterized protein LOC101267... 50 2e-11
ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251... 59 3e-11
emb|CAN60373.1| hypothetical protein VITISV_034932 [Vitis vinifera] 51 4e-11
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 61 1e-10
ref|XP_004238497.1| PREDICTED: uncharacterized protein LOC101255... 58 2e-10
gb|AAC62795.1| contains similarity to retroviral aspartyl protea... 60 2e-10
ref|XP_004248044.1| PREDICTED: uncharacterized protein LOC101249... 59 3e-10
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 46 4e-10
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula] 49 7e-10
ref|XP_004241086.1| PREDICTED: uncharacterized protein LOC101248... 61 2e-09
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 55.1 bits (131), Expect(3) = 6e-16
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Frame = -1
Query: 545 HMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIGS 366
H+G + +++D++LK+VL +PDF +N++S++ + + + S C++QD K IG
Sbjct: 1704 HIGDVFISNDLVLKDVLYIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQDKWLLKTIGK 1763
Query: 365 AKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDP--ADVSKLLWHYKL 192
A+ LY+L V IQ VS +WH ++
Sbjct: 1764 AELTNGLYLL----------------------RMKNEKVNCIQHTALMCKVSASMWHKRM 1801
Query: 191 GHASILVYRSLNK 153
GH SI + L K
Sbjct: 1802 GHPSISRIKELAK 1814
Score = 44.3 bits (103), Expect(3) = 6e-16
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -3
Query: 663 WILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVTH 541
WI+DSGA+ HI + T+ Y NMFV LP+KT +KV H
Sbjct: 1664 WIIDSGASSHICHDKFMFTNLYSAQNMFVILPTKTRLKVEH 1704
Score = 30.8 bits (68), Expect(3) = 6e-16
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -3
Query: 111 IFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
I LAKQ + SFPI ++ + F LIH DI G
Sbjct: 1830 ICPLAKQRRLSFPILNNIAENIFDLIHCDIWG 1861
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 68.9 bits (167), Expect(3) = 1e-14
Identities = 39/121 (32%), Positives = 60/121 (49%)
Frame = -1
Query: 542 MGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIGSA 363
+G I+LNS++ LKNVL +P+F N++S+++ T C + D C++QDP ++IG
Sbjct: 487 IGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIKEQKIGRG 546
Query: 362 KWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLGHA 183
LYVLD ++ + V Q+ A V LWH +LGH
Sbjct: 547 NQIGGLYVLDTSSVECTSVD-------------INSSVTEKQYCNAVVDSALWHSRLGHP 593
Query: 182 S 180
S
Sbjct: 594 S 594
Score = 30.4 bits (67), Expect(3) = 1e-14
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 129 DSIHYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
D +H +I AKQ SFP +S + F LIH+D G
Sbjct: 614 DLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWG 651
Score = 26.2 bits (56), Expect(3) = 1e-14
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 663 WILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKV 547
WI+DSGAT H++ L S ++ V LP+ + VK+
Sbjct: 446 WIIDSGATHHVSYDRNLFESLSDGLSNEVTLPTGSNVKI 484
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 62.4 bits (150), Expect(3) = 1e-13
Identities = 39/124 (31%), Positives = 63/124 (50%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
S +GT++LN DI+LKNVL +P+F N++S++ +T +I D ++C +QD + +G
Sbjct: 470 SGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLG 529
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
+ +LY+LD S + N VV I +WH +LG
Sbjct: 530 QGRRVANLYLLD-----------------VGDQSISVNAVVDIS---------MWHRRLG 563
Query: 188 HASI 177
HAS+
Sbjct: 564 HASL 567
Score = 30.4 bits (67), Expect(3) = 1e-13
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 102 LAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
LAKQ K SFP V F L+H+D+ G
Sbjct: 595 LAKQRKLSFPTSNKVCKEIFDLLHIDVWG 623
Score = 29.6 bits (65), Expect(3) = 1e-13
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 672 STQWILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVT 544
S W++DSGAT H++ L +S V V LP+ VK++
Sbjct: 428 SATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKIS 470
>ref|XP_003524766.2| PREDICTED: uncharacterized protein LOC100820019 isoform X1 [Glycine
max] gi|571455200|ref|XP_006580017.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X2 [Glycine
max] gi|571455202|ref|XP_006580018.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X3 [Glycine
max] gi|571455204|ref|XP_006580019.1| PREDICTED:
uncharacterized protein LOC100820019 isoform X4 [Glycine
max]
Length = 495
Score = 57.4 bits (137), Expect(2) = 2e-13
Identities = 24/60 (40%), Positives = 40/60 (66%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
+H GT+ L+ I L NVL +P FTFN++S++K+ +C +I ++C+LQD + +IG
Sbjct: 433 THSGTVHLSRTITLFNVLYIPTFTFNLISISKLVSSTNCALIFSSTSCMLQDASNRMKIG 492
Score = 45.1 bits (105), Expect(2) = 2e-13
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = -3
Query: 678 PFSTQWILDSGATDHITCSTVLNTSNYLVVN-MFV*LPSKTLVKVTH 541
PF++ WILDSGATDH+TCS + N +Y +N + V LP+ V TH
Sbjct: 389 PFTSSWILDSGATDHVTCS-LNNLHSYERINPVTVMLPNGNHVHATH 434
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 62.0 bits (149), Expect(3) = 2e-13
Identities = 44/132 (33%), Positives = 66/132 (50%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
S +GT+ +N DIIL+NVL +P+F N++S++ +T +I D S C +QD T +G
Sbjct: 481 SGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLG 540
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
K +LYVLD + + + N VV DVS +WH +LG
Sbjct: 541 EGKRIGNLYVLDTQS-----------------PAISVNAVV-------DVS--VWHKRLG 574
Query: 188 HASILVYRSLNK 153
H S SL++
Sbjct: 575 HPSFSRLDSLSE 586
Score = 31.6 bits (70), Expect(3) = 2e-13
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 126 SIHYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
S + + LAKQ K SFP + S F+L+H+D+ G
Sbjct: 598 SAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWG 634
Score = 28.1 bits (61), Expect(3) = 2e-13
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 672 STQWILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVT 544
S W++DSGAT H++ L + + FV LP+ V+++
Sbjct: 439 SDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRIS 481
>gb|EOY03128.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao]
Length = 647
Score = 47.8 bits (112), Expect(3) = 3e-12
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVT-LQNSCIMIRDHSTCILQDPTTTKRI 372
+H+G +Q++ + L NVL VP F FN++S+++++ +N C++ + IL+ P+ T I
Sbjct: 217 THIGIVQISPTLQLDNVLFVPSFKFNLISVSQLSKSRNHCLIFTNKHCIILEIPSWT-MI 275
Query: 371 GSAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKL 192
G A+ L+++ C L +T +PI + + LWH++L
Sbjct: 276 GVAEVKVGLHLMQCKLLGKRPQGSISA---------STTIKIPI-CNSVSLRFNLWHHRL 325
Query: 191 GH 186
H
Sbjct: 326 RH 327
Score = 40.0 bits (92), Expect(3) = 3e-12
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -3
Query: 663 WILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVTH 541
WI+D+GATDHI CS T+ + +FV LP+ VTH
Sbjct: 178 WIVDTGATDHIACSLHSFTTFKSIQGVFVELPNNAKALVTH 218
Score = 30.0 bits (66), Expect(3) = 3e-12
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 171 LQKLKQADSTVTIPDSIHYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
++++KQ + +S + LAKQ F +HV S + F LIH +I G
Sbjct: 333 MKQIKQVCPDIFFKESSVCYVCPLAKQKHLPFLVHVKSSKAPFDLIHTNIWG 384
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 54.7 bits (130), Expect(2) = 4e-12
Identities = 36/123 (29%), Positives = 57/123 (46%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
SH+GT+ ++ +L NVLCVP F N++S++K+ + + I C +QD + K IG
Sbjct: 444 SHIGTVSFSAQFVLHNVLCVPLFYLNLISISKLAFDSFYVTIFLRQVCFIQDLQSGKMIG 503
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
+ LY C+ L T +VV + ++ LWH +LG
Sbjct: 504 MGTESEGLY---CLNLPRK----------------GTCNVVNTK------TQDLWHQRLG 538
Query: 188 HAS 180
H S
Sbjct: 539 HPS 541
Score = 43.1 bits (100), Expect(2) = 4e-12
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = -3
Query: 669 TQWILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVTH 541
T WILDSGA+DHI C + TS V N V LP T V+H
Sbjct: 403 TMWILDSGASDHIVCDSSFLTSFQPVHNRIVKLPDGTSAHVSH 445
>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
Length = 1011
Score = 54.7 bits (130), Expect(2) = 4e-12
Identities = 36/123 (29%), Positives = 57/123 (46%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
SH+GT+ ++ +L NVLCVP F N++S++K+ + + I C +QD + K IG
Sbjct: 444 SHIGTVSFSAQFVLHNVLCVPLFYLNLISISKLAFDSFYVTIFLRQVCFIQDLQSGKMIG 503
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
+ LY C+ L T +VV + ++ LWH +LG
Sbjct: 504 MGTESEGLY---CLNLPRK----------------GTCNVVNTK------TQDLWHQRLG 538
Query: 188 HAS 180
H S
Sbjct: 539 HPS 541
Score = 43.1 bits (100), Expect(2) = 4e-12
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = -3
Query: 669 TQWILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVTH 541
T WILDSGA+DHI C + TS V N V LP T V+H
Sbjct: 403 TMWILDSGASDHIVCDSSFLTSFQPVHNRIVKLPDGTSAHVSH 445
>ref|XP_004289223.1| PREDICTED: uncharacterized protein LOC101293529 [Fragaria vesca
subsp. vesca]
Length = 536
Score = 55.5 bits (132), Expect(2) = 5e-12
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
+H+GT+ +++L NVLCVP F N++S++K+ + + I C +QD + K IG
Sbjct: 439 THVGTVAFTENLVLHNVLCVPLFYLNLISISKLVFDSFHVTIFLKQVCFIQDLRSGKTIG 498
Query: 368 SAKWHKDLYVLD 333
+ + LY LD
Sbjct: 499 TGTEREGLYCLD 510
Score = 42.0 bits (97), Expect(2) = 5e-12
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -3
Query: 663 WILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVTH 541
WILDSGA+DHI C+ TS + + V LP L KVTH
Sbjct: 400 WILDSGASDHIVCNPKFLTSLKQIHHRLVKLPDGNLSKVTH 440
>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
gi|449449869|ref|XP_004142687.1| PREDICTED:
uncharacterized protein LOC101213831 [Cucumis sativus]
Length = 440
Score = 52.8 bits (125), Expect(2) = 6e-12
Identities = 23/70 (32%), Positives = 44/70 (62%)
Frame = -1
Query: 545 HMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIGS 366
H+G + +++D++LK+VL +PDF +N++S++ + + + S C++QD K IG
Sbjct: 360 HIGDVFISNDLVLKDVLYIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQDKWLLKTIGK 419
Query: 365 AKWHKDLYVL 336
A+ LY+L
Sbjct: 420 AELTNGLYLL 429
Score = 44.3 bits (103), Expect(2) = 6e-12
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -3
Query: 663 WILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVTH 541
WI+DSGA+ HI + T+ Y NMFV LP+KT +KV H
Sbjct: 320 WIIDSGASSHICHDKFMFTNLYSAQNMFVILPTKTRLKVEH 360
>ref|XP_004234448.1| PREDICTED: uncharacterized protein LOC101267489 [Solanum
lycopersicum]
Length = 886
Score = 50.1 bits (118), Expect(3) = 2e-11
Identities = 33/123 (26%), Positives = 54/123 (43%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
+H+G+ + S LKNVL +P+F FN++S++++T C + + LQD + +
Sbjct: 451 THIGSCNITSQNTLKNVLLIPEFKFNLLSVSQITKDLKCAVCFFPNFVTLQDLSNGQVKV 510
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
+ H LY+L ++ S T D LLWH +LG
Sbjct: 511 IGREHDGLYILPNYSISPLNTNEKCSSYLAHEESHFT-----------DTQALLWHQRLG 559
Query: 188 HAS 180
H S
Sbjct: 560 HTS 562
Score = 37.7 bits (86), Expect(3) = 2e-11
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -3
Query: 111 IFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
I LAKQH+ FP VST+ FQL+H+D+ G
Sbjct: 586 ICPLAKQHRLPFPKSTTVSTTSFQLLHIDVWG 617
Score = 26.9 bits (58), Expect(3) = 2e-11
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 663 WILDSGATDHIT-CSTVLNTSNYLVVN--MFV*LPSKTLVKVTH 541
WI+DSGAT+H+T S +L + L N V LP+ ++TH
Sbjct: 409 WIIDSGATNHMTHNSDILTHMHPLPSNKPRNVQLPNGETNQITH 452
>ref|XP_004245314.1| PREDICTED: uncharacterized protein LOC101251909 [Solanum
lycopersicum]
Length = 648
Score = 58.9 bits (141), Expect(3) = 3e-11
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
SH+G + D ++K+VL VP+F +N++S++++T Q C ++ CI QD + +G
Sbjct: 476 SHIGEPMILKDKVVKDVLFVPEFKYNLLSVSQLTKQLRCTVVFFPDFCIFQDLFNGRVLG 535
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFD-PADVSKLLWHYKL 192
K ++ LY+L+ + N PI F+ + + LWH +L
Sbjct: 536 IGKENQGLYILNTAATTKLSNDQGSSGKYAKEDACKRN---PISFNSTVESASSLWHKRL 592
Query: 191 GHASILV 171
GHA + V
Sbjct: 593 GHAPLKV 599
Score = 31.6 bits (70), Expect(3) = 3e-11
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 150 DSTVTIPDSIHYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI 22
D + + H +I +AKQ + FPI + S+S F +IH D+
Sbjct: 605 DLNIVSVNDQHCSICPIAKQSRLPFPISLSHSSSIFDIIHGDV 647
Score = 23.9 bits (50), Expect(3) = 3e-11
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -3
Query: 663 WILDSGATDHITCS-TVLNTSNYLVV--NMFV*LPSKTLVKVTHGYNPI 526
WI+D+GA++H+ + +++ S L V M V LP+ V ++H P+
Sbjct: 434 WIIDTGASNHMVHNFGLMSQSANLDVQGGMRVNLPTGDQVSISHIGEPM 482
>emb|CAN60373.1| hypothetical protein VITISV_034932 [Vitis vinifera]
Length = 1264
Score = 50.8 bits (120), Expect(3) = 4e-11
Identities = 32/126 (25%), Positives = 57/126 (45%)
Frame = -1
Query: 536 TIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIGSAKW 357
++ L+ D+ L +VL VP N++S++K+T + CI + C QD + K IG+A+
Sbjct: 339 SVVLSRDLTLNSVLLVPHLDCNLLSISKLTKEKRCITNFSSTHCEFQDLDSGKTIGNAEE 398
Query: 356 HKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLGHASI 177
LY+L ++ + D + +LWHY+LGH ++
Sbjct: 399 CSGLYIL-----------KERHDPQEQPQMAVGSNSFSVSCQNNDSAIMLWHYRLGHPNV 447
Query: 176 LVYRSL 159
+ L
Sbjct: 448 KYLKHL 453
Score = 34.3 bits (77), Expect(3) = 4e-11
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -3
Query: 132 PDSIHYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*GQSR 7
P S I L+KQ +S FPI +S F +IH DI G SR
Sbjct: 462 PKSFECEICQLSKQVRSQFPIQPYKESSPFSMIHSDIWGPSR 503
Score = 28.5 bits (62), Expect(3) = 4e-11
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 663 WILDSGATDHIT-CSTVLNTSNYLVVNMFV*LPSKTLVKV 547
WI+DSGA+DH+T +T+ T + N+ V + +L KV
Sbjct: 295 WIVDSGASDHMTGNATIFYTYSSCPNNLTVRIADGSLSKV 334
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 60.8 bits (146), Expect(2) = 1e-10
Identities = 44/132 (33%), Positives = 61/132 (46%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
S +G +QLN I L NVL +P+F N++S++ +T +I D S+C +QDPT IG
Sbjct: 430 SGVGIVQLNEHITLHNVLYIPEFRLNLLSISSLTSDIGSQVIFDVSSCAIQDPTKGWTIG 489
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
+ +LYVLD + N VV I LWH +LG
Sbjct: 490 QGRRVANLYVLDVKS-----------------SPMKINAVVDIS---------LWHKRLG 523
Query: 188 HASILVYRSLNK 153
H S Y L+K
Sbjct: 524 HPS---YTRLDK 532
Score = 31.6 bits (70), Expect(2) = 1e-10
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 663 WILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVT 544
WI+DSGAT H+ + TS + V LP+ +VK++
Sbjct: 391 WIIDSGATHHVCHDRSMYTSIDITTTSNVNLPNGMIVKIS 430
>ref|XP_004238497.1| PREDICTED: uncharacterized protein LOC101255989 [Solanum
lycopersicum]
Length = 587
Score = 57.8 bits (138), Expect(3) = 2e-10
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
SH+G + D ++K+VL VP+F +N++S++++T C ++ CI QD + +G
Sbjct: 395 SHIGESLVLKDKVVKDVLFVPEFKYNLLSVSQLTKLLKCAVVFFPDFCIFQDLFNGRVLG 454
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQF-DPADVSKLLWHYKL 192
K ++ LY+L+ T A + PI F AD LWH +L
Sbjct: 455 IGKENQGLYILN--TPVTTKPSNDQVSSGECAKEAAYKRIRPISFSSTADSLSSLWHKRL 512
Query: 191 GHASILV 171
GHA + V
Sbjct: 513 GHAPLKV 519
Score = 26.9 bits (58), Expect(3) = 2e-10
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 669 TQWILDSGATDHITCSTVL---NTSNYLVVNMFV*LPSKTLVKVTH 541
T WI+D+GA++H+ + L T+ + M V LP+ LV ++H
Sbjct: 351 TNWIIDTGASNHMVHNFGLMSQPTNLDVQGGMRVNLPTGDLVSISH 396
Score = 26.6 bits (57), Expect(3) = 2e-10
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 120 HYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
H +I +AKQ + F + S S F +IH D+ G
Sbjct: 535 HCSICPIAKQSRLPFTTSLSHSVSVFDIIHGDVWG 569
>gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam:
rvp.hmm, score: 11.80) [Arabidopsis thaliana]
Length = 1244
Score = 60.1 bits (144), Expect(2) = 2e-10
Identities = 41/121 (33%), Positives = 62/121 (51%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
S +G++Q+N +I+L+NVL +P+F N++S++ +T +I D S C +QD T RIG
Sbjct: 457 SGVGSVQINENILLRNVLFLPEFRLNLISISSLTSDIGSRVIFDPSCCEIQDLTKDLRIG 516
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
+ +LYVLD S + N VV DVS LWH ++G
Sbjct: 517 RGRRIGNLYVLDTT---------------PPLDSVSVNAVV-------DVS--LWHMRMG 552
Query: 188 H 186
H
Sbjct: 553 H 553
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 699 VTGIPIHPFSTQ-WILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVT 544
+ + H ST+ W++DSGAT H+ L S V +V LP+ + VK++
Sbjct: 405 ILNVSQHTLSTETWVIDSGATHHVCHDKSLFVSLDHSVVSYVNLPTGSRVKIS 457
>ref|XP_004248044.1| PREDICTED: uncharacterized protein LOC101249767 [Solanum
lycopersicum]
Length = 652
Score = 58.5 bits (140), Expect(3) = 3e-10
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
SH+G + D ++K+VL VP+F +N+++++++T Q C ++ CI QD + +G
Sbjct: 476 SHIGESLILKDKVVKDVLFVPEFKYNLLAVSQLTKQLKCAIVFFPDFCIFQDLFNGRVLG 535
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPA-DVSKLLWHYKL 192
K ++ LY+L+ T + P+ F+ + D LWH +L
Sbjct: 536 IGKENQGLYILN--TAATTKPSNDQGSSEEYAKEVVCKRIRPVSFNSSVDSVSSLWHKRL 593
Query: 191 GHASILV 171
GHA + V
Sbjct: 594 GHAPLKV 600
Score = 30.0 bits (66), Expect(3) = 3e-10
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 120 HYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*G 16
H +I +AKQ + FP + S+S F +IH D+ G
Sbjct: 616 HCSICPIAKQSRLPFPTSLSHSSSVFDIIHGDVWG 650
Score = 22.3 bits (46), Expect(3) = 3e-10
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 663 WILDSGATDHITCS-TVLNTSNYLVV--NMFV*LPSKTLVKVTH 541
WI+D+GA++H+ + +++ S L V M V LP V ++H
Sbjct: 434 WIIDTGASNHMVHNFGLMSQSANLDVQGGMRVNLPIGDQVSISH 477
>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 46.2 bits (108), Expect(3) = 4e-10
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Frame = -1
Query: 539 GTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIGSAK 360
G++ ++ + L NVL VP+ + N++S++K+T + C S C Q+ T+ + IG+A+
Sbjct: 401 GSVFISPSLTLHNVLHVPNLSCNLLSISKITQDHQCQANFYPSYCEFQELTSGRTIGNAR 460
Query: 359 WHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQ---FDPADVSK----LLWH 201
LY + + PIQ F+ V+ +LWH
Sbjct: 461 EIGGLYFFE----------------------NGSESRKPIQSTCFESISVASSDDIILWH 498
Query: 200 YKLGHASILVYRSL 159
Y+LGH S + L
Sbjct: 499 YRLGHPSFQYLKHL 512
Score = 33.9 bits (76), Expect(3) = 4e-10
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 132 PDSIHYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI*GQSR 7
P S LAK H++SFP+ + F LIH D+ G SR
Sbjct: 522 PSSFQCEFCELAKHHRTSFPLQPYRISKPFSLIHSDVWGPSR 563
Score = 30.0 bits (66), Expect(3) = 4e-10
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -3
Query: 663 WILDSGATDHITCSTVLNTS 604
WI+DSGATDH+T S+ + +S
Sbjct: 358 WIIDSGATDHMTGSSQIFSS 377
>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
Length = 1157
Score = 48.5 bits (114), Expect(2) = 7e-10
Identities = 32/122 (26%), Positives = 54/122 (44%)
Frame = -1
Query: 545 HMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIGS 366
+ G + +S + L NVL P F N++S++K+ SC + +CI+Q+ +T + IG
Sbjct: 430 YAGNVSFSSSLYLTNVLYCPTFNLNLISVSKMCKSLSCFVNFSTDSCIIQELSTKRMIGL 489
Query: 365 AKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLGH 186
+ LY L + + N+V F + LWHY++GH
Sbjct: 490 GENIHGLYRL----VVSADSFQSPSHRFNNNLFVSCNNVSQSHFIVIP-NSALWHYRMGH 544
Query: 185 AS 180
S
Sbjct: 545 LS 546
Score = 41.6 bits (96), Expect(2) = 7e-10
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = -3
Query: 708 LKTVTGIPIHPFSTQWILDSGATDHITCSTVLNTSNYLVVNMFV*LPSKTLVKVTHGYN 532
+ +V I S WILDSGA +HI S++ TS Y + V LP+KT V V + N
Sbjct: 375 ISSVVSCAIDSASHHWILDSGANNHICSSSLCFTSFYKIKPTNVNLPNKTTVLVQYAGN 433
>ref|XP_004241086.1| PREDICTED: uncharacterized protein LOC101248883 [Solanum
lycopersicum]
Length = 802
Score = 61.2 bits (147), Expect(3) = 2e-09
Identities = 36/132 (27%), Positives = 61/132 (46%)
Frame = -1
Query: 548 SHMGTIQLNSDIILKNVLCVPDFTFNIVSLTKVTLQNSCIMIRDHSTCILQDPTTTKRIG 369
SH+G++QLN+ ++ NVLC+P F FN++S+ K+T + +C + + CI QD ++ K G
Sbjct: 457 SHIGSLQLNATEVISNVLCIPTFRFNLLSVNKLTRELNCCVSFFPTHCIFQDLSSGKVKG 516
Query: 368 SAKWHKDLYVLDCVTLXXXXXXXXXXXXXXXXXSFATNDVVPIQFDPADVSKLLWHYKLG 189
K + LYV+ N ++ LW +LG
Sbjct: 517 IGKVEEGLYVM---------------HWNWNETPQGNNSLIMSAIKEGAGDPALWQRRLG 561
Query: 188 HASILVYRSLNK 153
H + V R + +
Sbjct: 562 HVPMKVLRKIKE 573
Score = 24.3 bits (51), Expect(3) = 2e-09
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 666 QWILDSGATDH-ITCSTVLNTSNYLVVNMFV*LPSKTLVKVTH 541
+WI+D+GA++H I T L+ + + V LP+ V+H
Sbjct: 416 KWIIDTGASNHMINNHTFLHNKHTIHSTGQVQLPTGESATVSH 458
Score = 22.3 bits (46), Expect(3) = 2e-09
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 171 LQKLKQ--ADSTVTIPDSIHYTIFSLAKQHKSSFPIHVPVSTSCFQLIHVDI 22
L+K+K+ +S TI H I A+Q + FP F LIH+D+
Sbjct: 568 LRKIKEFNTNSNFTID---HCHICPQARQTRMPFPNSSTNVNVVFDLIHMDV 616