BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00024124
         (1141 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   4e-10
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    65   5e-08

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 10/222 (4%)
 Frame = -3

Query: 1130 IVGQSCENKVFEKKNLLDLANSPHGASWIWNGIWAARDLLSVGLCYKIGSGYDTCVWGDP 951
            ++ +  + K F + N L+   SP+  S+    I +AR ++  G+C  IG G DT +WGDP
Sbjct: 889  LMARVIKGKYFPRSNFLEARVSPN-MSFTCKSILSARAVIQKGMCRVIGDGRDTTIWGDP 947

Query: 950  WIPGLENFRTPRGXXXXXXXXXXXXLTVNLEXXXXXXXXXXXPRPWQCKILGESKFFLKR 771
            W+P LE +                   +               +PW+   +      L++
Sbjct: 948  WVPSLERYSIAATEGVSEDDGPQKVCELISNDRWNVELLNTLFQPWESTAIQRIPVALQK 1007

Query: 770  NMMFWCDLSFRQG--PLPAAYDLQIYNRKVVGNDNLR----NLWQRLWKSGLHNRHKILV 609
                W  +  + G   + +AY  ++   +  G    R     LWQ++WK+ +  + K+  
Sbjct: 1008 KPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFS 1067

Query: 608  WHAISKAIPTGDHLKVWLRRGEH----CLIYGHETESIAHLL 495
            W AI   +    +++   +RG +    C   G + E+  HL+
Sbjct: 1068 WKAIHNGLAVYTNMR---KRGMNIDGACPRCGEKEETTEHLI 1106


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 9/205 (4%)
 Frame = -3

Query: 1052 SWIWNGIWAARDLLSVGLCYKIGSGYDTCVWGDPWIPGLENFRTPRGXXXXXXXXXXXXL 873
            S+ W  I   R+LL  GL   IG+G  T VW D W+    N R P               
Sbjct: 904  SYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSN-RRPLNRRRFINVDLKVSQ 962

Query: 872  TVNLEXXXXXXXXXXXPRPWQCK--ILGESKFFLKRNMMFWCDLSFRQGPLPAAYDL--- 708
             ++               PW+    IL +   F K +   W         +   Y+    
Sbjct: 963  LIDPTSRNWNLNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSK 1022

Query: 707  QIYNR---KVVGNDNLRNLWQRLWKSGLHNRHKILVWHAISKAIPTGDHLKV-WLRRGEH 540
            Q+++R   +     ++ +L+ ++W      + +I +W A+  AIP  D L+   +R  + 
Sbjct: 1023 QVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDG 1082

Query: 539  CLIYGHETESIAHLLLRYPLMKVIW 465
            CL+   E E+I H+L   PL + +W
Sbjct: 1083 CLMCDTENETINHILFECPLARQVW 1107