BLASTX nr result
ID: Catharanthus23_contig00023713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00023713
(406 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353898.1| PREDICTED: U2 snRNP-associated SURP motif-co... 130 2e-28
ref|XP_006353897.1| PREDICTED: U2 snRNP-associated SURP motif-co... 130 2e-28
ref|XP_004234429.1| PREDICTED: U2 snRNP-associated SURP motif-co... 128 7e-28
gb|EPS63578.1| hypothetical protein M569_11205 [Genlisea aurea] 114 1e-23
ref|XP_006599196.1| PREDICTED: U2 snRNP-associated SURP motif-co... 108 6e-22
ref|XP_006585860.1| PREDICTED: U2 snRNP-associated SURP motif-co... 108 6e-22
ref|XP_004509622.1| PREDICTED: U2 snRNP-associated SURP motif-co... 107 2e-21
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca... 105 6e-21
gb|ESW28295.1| hypothetical protein PHAVU_003G2751001g, partial ... 104 1e-20
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu... 104 1e-20
ref|XP_002308714.1| RNA recognition motif-containing family prot... 103 2e-20
ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-co... 103 3e-20
ref|XP_002324341.2| RNA recognition motif-containing family prot... 102 5e-20
gb|EOY29310.1| RNA recognition motif-containing protein isoform ... 101 9e-20
emb|CBI21155.3| unnamed protein product [Vitis vinifera] 101 9e-20
gb|EMJ26559.1| hypothetical protein PRUPE_ppa000894mg [Prunus pe... 99 6e-19
ref|XP_004291970.1| PREDICTED: U2 snRNP-associated SURP motif-co... 97 2e-18
ref|XP_006858350.1| hypothetical protein AMTR_s00064p00173090 [A... 96 7e-18
ref|XP_002874237.1| RNA recognition motif-containing protein [Ar... 95 9e-18
ref|NP_568464.1| RNA recognition motif-containing protein RRC1 [... 95 9e-18
>ref|XP_006353898.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform X2 [Solanum tuberosum]
Length = 947
Score = 130 bits (327), Expect = 2e-28
Identities = 65/88 (73%), Positives = 69/88 (78%)
Frame = -1
Query: 265 MSSKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEK 86
MS++KKTPFQKH RLYQEFVESFQADNTPGSK FVRGGTINPN+K
Sbjct: 1 MSARKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQADNTPGSKAFVRGGTINPNDK 60
Query: 85 FKPDSEGGNSKDEGSGLKKGSRYVPSFL 2
K DS+GGNSKDEGSGLKKGSRYVPSFL
Sbjct: 61 LKMDSQGGNSKDEGSGLKKGSRYVPSFL 88
>ref|XP_006353897.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform X1 [Solanum tuberosum]
Length = 948
Score = 130 bits (327), Expect = 2e-28
Identities = 65/88 (73%), Positives = 69/88 (78%)
Frame = -1
Query: 265 MSSKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEK 86
MS++KKTPFQKH RLYQEFVESFQADNTPGSK FVRGGTINPN+K
Sbjct: 1 MSARKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQADNTPGSKAFVRGGTINPNDK 60
Query: 85 FKPDSEGGNSKDEGSGLKKGSRYVPSFL 2
K DS+GGNSKDEGSGLKKGSRYVPSFL
Sbjct: 61 LKMDSQGGNSKDEGSGLKKGSRYVPSFL 88
>ref|XP_004234429.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Solanum lycopersicum]
Length = 947
Score = 128 bits (322), Expect = 7e-28
Identities = 64/88 (72%), Positives = 69/88 (78%)
Frame = -1
Query: 265 MSSKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEK 86
MS++KKTPFQKH RLYQEFVESFQAD+TPGSK FVRGGTINPN+K
Sbjct: 1 MSARKKTPFQKHREEEEAKKKRAEDETARLYQEFVESFQADSTPGSKAFVRGGTINPNDK 60
Query: 85 FKPDSEGGNSKDEGSGLKKGSRYVPSFL 2
K DS+GGNSKDEGSGLKKGSRYVPSFL
Sbjct: 61 LKMDSQGGNSKDEGSGLKKGSRYVPSFL 88
>gb|EPS63578.1| hypothetical protein M569_11205 [Genlisea aurea]
Length = 82
Score = 114 bits (286), Expect = 1e-23
Identities = 57/82 (69%), Positives = 63/82 (76%)
Frame = -1
Query: 265 MSSKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEK 86
MSS++KTPFQKH RLYQEF+ESFQ+DNTPGSK FVRGGTI+PNEK
Sbjct: 1 MSSRRKTPFQKHREEEEAKKKRAEDETARLYQEFLESFQSDNTPGSKAFVRGGTIDPNEK 60
Query: 85 FKPDSEGGNSKDEGSGLKKGSR 20
K +SEGGNSKDEGSGLKKGSR
Sbjct: 61 LKSNSEGGNSKDEGSGLKKGSR 82
>ref|XP_006599196.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Glycine max]
Length = 969
Score = 108 bits (271), Expect = 6e-22
Identities = 56/86 (65%), Positives = 60/86 (69%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ D TPGSK FVRGGTINPN+KFK
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTINPNDKFK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD SG KKGSRYVPSF+
Sbjct: 67 DDSEGEKSKDGVSGPKKGSRYVPSFI 92
>ref|XP_006585860.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform X1 [Glycine max]
gi|571473234|ref|XP_006585861.1| PREDICTED: U2
snRNP-associated SURP motif-containing protein-like
isoform X2 [Glycine max]
Length = 969
Score = 108 bits (271), Expect = 6e-22
Identities = 56/86 (65%), Positives = 60/86 (69%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ D TPGSK FVRGGTINPN+KFK
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTINPNDKFK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD SG KKGSRYVPSF+
Sbjct: 67 DDSEGEKSKDGVSGPKKGSRYVPSFI 92
>ref|XP_004509622.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform X1 [Cicer arietinum]
gi|502154215|ref|XP_004509623.1| PREDICTED: U2
snRNP-associated SURP motif-containing protein-like
isoform X2 [Cicer arietinum]
gi|502154218|ref|XP_004509624.1| PREDICTED: U2
snRNP-associated SURP motif-containing protein-like
isoform X3 [Cicer arietinum]
Length = 977
Score = 107 bits (266), Expect = 2e-21
Identities = 55/86 (63%), Positives = 59/86 (68%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ DN PGSK FVRGGTINPN+K K
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD SG KKGSRYVPSF+
Sbjct: 67 DDSEGEKSKDGVSGPKKGSRYVPSFI 92
>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
gi|355522973|gb|AET03427.1| U2-associated protein SR140
[Medicago truncatula]
Length = 1139
Score = 105 bits (262), Expect = 6e-21
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ DN PGSK FVRGGTINPN+K K
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SK+ SG KKGSRYVPSF+
Sbjct: 67 DDSEGEKSKEGVSGPKKGSRYVPSFI 92
>gb|ESW28295.1| hypothetical protein PHAVU_003G2751001g, partial [Phaseolus
vulgaris] gi|561029656|gb|ESW28296.1| hypothetical
protein PHAVU_003G2751001g, partial [Phaseolus vulgaris]
Length = 157
Score = 104 bits (259), Expect = 1e-20
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ D TPGSK FVRGGTINPN++FK
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTINPNDRFK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD S KKGSRYVPSF+
Sbjct: 67 DDSEGEKSKDGVSVPKKGSRYVPSFI 92
>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
gi|223545356|gb|EEF46861.1| RNA binding protein,
putative [Ricinus communis]
Length = 979
Score = 104 bits (259), Expect = 1e-20
Identities = 55/86 (63%), Positives = 58/86 (67%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ DN PGSK FVRGGTINPN+K K
Sbjct: 7 TRKKTPFQKHREEEEAKKKREDDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD S KKGSRYVPSFL
Sbjct: 67 TDSEGEKSKDGVSVPKKGSRYVPSFL 92
>ref|XP_002308714.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222854690|gb|EEE92237.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 988
Score = 103 bits (257), Expect = 2e-20
Identities = 54/86 (62%), Positives = 58/86 (67%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ DN PGSK FVRGGTINPNEK K
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
D+EG SKD S KKGSRYVPSF+
Sbjct: 67 SDAEGEKSKDGVSVPKKGSRYVPSFI 92
>ref|XP_004138695.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cucumis sativus] gi|449493301|ref|XP_004159248.1|
PREDICTED: U2 snRNP-associated SURP motif-containing
protein-like [Cucumis sativus]
Length = 961
Score = 103 bits (256), Expect = 3e-20
Identities = 54/86 (62%), Positives = 58/86 (67%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ DN PGSK FVRGGTINPNEK K
Sbjct: 7 TRKKTPFQKHREEEEAKKKREEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
+SEG SKD S KKGSRYVPSF+
Sbjct: 67 SESEGEKSKDGVSVPKKGSRYVPSFI 92
>ref|XP_002324341.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550317898|gb|EEF02906.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 969
Score = 102 bits (254), Expect = 5e-20
Identities = 54/86 (62%), Positives = 58/86 (67%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ DN PGSK FVRGGTINPNEK K
Sbjct: 7 TRKKTPFQKHREEEEARKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNEKLK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DS+G SKD S KKGSRYVPSF+
Sbjct: 67 IDSKGEKSKDGVSVPKKGSRYVPSFI 92
>gb|EOY29310.1| RNA recognition motif-containing protein isoform 1 [Theobroma
cacao]
Length = 985
Score = 101 bits (252), Expect = 9e-20
Identities = 52/86 (60%), Positives = 58/86 (67%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY+EFV SFQ +N PGSK FVRGGTINPNE+ K
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYEEFVASFQGENAPGSKAFVRGGTINPNERLK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD S KKGSRYVPSF+
Sbjct: 67 SDSEGEKSKDGVSVPKKGSRYVPSFI 92
>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 101 bits (252), Expect = 9e-20
Identities = 53/86 (61%), Positives = 58/86 (67%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ DN PGSK FVRGGTINPNE+ K
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNERVK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
+SEG SKD S KKGSRYVPSF+
Sbjct: 67 TESEGEKSKDGVSVPKKGSRYVPSFI 92
>gb|EMJ26559.1| hypothetical protein PRUPE_ppa000894mg [Prunus persica]
Length = 968
Score = 99.0 bits (245), Expect = 6e-19
Identities = 51/83 (61%), Positives = 56/83 (67%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY+EFV+SFQ DN PGSK FVRGGTINPNEK K
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEEETARLYKEFVDSFQGDNAPGSKAFVRGGTINPNEKVK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVP 11
D+EG SKD S KKGSRYVP
Sbjct: 67 ADTEGEKSKDGVSVPKKGSRYVP 89
>ref|XP_004291970.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Fragaria vesca subsp. vesca]
Length = 980
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/86 (59%), Positives = 57/86 (66%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLY EFVESFQ +N GS+ FVRGGTINPNE+ K
Sbjct: 7 TRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGENAAGSRTFVRGGTINPNERVK 66
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DS+G SKD S KKGSRYVPSFL
Sbjct: 67 TDSQGEKSKDGVSVPKKGSRYVPSFL 92
>ref|XP_006858350.1| hypothetical protein AMTR_s00064p00173090 [Amborella trichopoda]
gi|548862457|gb|ERN19817.1| hypothetical protein
AMTR_s00064p00173090 [Amborella trichopoda]
Length = 1011
Score = 95.5 bits (236), Expect = 7e-18
Identities = 55/95 (57%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Frame = -1
Query: 274 DENMSS----KKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGG 107
D+ M+S +KKTPFQKH RLY+EFVESFQ D+ +K FVRGG
Sbjct: 29 DDKMNSFSVIRKKTPFQKHREEEEAKKKRAEDETARLYEEFVESFQGDSA--AKAFVRGG 86
Query: 106 TINPNEKFKPDSEGGNSKDEGSGLKKGSRYVPSFL 2
TINPNE+ K D EGGNSKD SG KKGSRYVPSF+
Sbjct: 87 TINPNERLKND-EGGNSKDGVSGSKKGSRYVPSFV 120
>ref|XP_002874237.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297320074|gb|EFH50496.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 948
Score = 95.1 bits (235), Expect = 9e-18
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLYQEFVESFQ DN +K FVRGGTINP +K K
Sbjct: 7 TRKKTPFQKHREEEEARKKKAEDETARLYQEFVESFQGDNAT-TKTFVRGGTINPGDKPK 65
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD GS KKGSRYVPSFL
Sbjct: 66 VDSEGEKSKDGGSVSKKGSRYVPSFL 91
>ref|NP_568464.1| RNA recognition motif-containing protein RRC1 [Arabidopsis
thaliana] gi|13430600|gb|AAK25922.1|AF360212_1 unknown
protein [Arabidopsis thaliana]
gi|14532872|gb|AAK64118.1| unknown protein [Arabidopsis
thaliana] gi|332006012|gb|AED93395.1| RNA recognition
motif-containing protein RRC1 [Arabidopsis thaliana]
Length = 946
Score = 95.1 bits (235), Expect = 9e-18
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = -1
Query: 259 SKKKTPFQKHXXXXXXXXXXXXXXXXRLYQEFVESFQADNTPGSKGFVRGGTINPNEKFK 80
++KKTPFQKH RLYQEFVESFQ DN +K FVRGGTINP +K K
Sbjct: 7 TRKKTPFQKHREEEEARKKKAEDETARLYQEFVESFQGDNAT-TKTFVRGGTINPGDKPK 65
Query: 79 PDSEGGNSKDEGSGLKKGSRYVPSFL 2
DSEG SKD GS KKGSRYVPSFL
Sbjct: 66 VDSEGEKSKDGGSVSKKGSRYVPSFL 91